L596_g6816 (Steinernema carpocapsae)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 L596_g6816 T336501_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
L596_g6816.t1 Sox 237 308
L596_g6816.t2 Sox 289 360

Links

Other Sox family TFs
Other Steinernema carpocapsae TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
L892_g20462 Steinernema scapterisci L892_g20462 N 0.741
L898_g23157 Steinernema monticolum L898_g23157 N 0.705
L889_g27021 Steinernema feltiae L889_g27021 N 0.700
L893_g28874 Steinernema glaseri L893_g28874 N 0.688
MhA1_Contig389.frz3.gene3 Meloidogyne hapla MhA1_Contig389.frz3.gene3 N 0.599
DME_0000639401 Dracunculus medinensis DME_0000639401 N 0.584
Minc08472 Meloidogyne incognita Minc08472 N 0.559
ASU_11889 Ascaris suum ASU_11889 N 0.543
ALUE_0001931801 Ascaris lumbricoides ALUE_0001931801 N 0.543
TCNE_0001183201 Toxocara canis TCNE_0001183201 N 0.543
SMUV_0000949901 Syphacia muris SMUV_0000949901 N 0.536
PTRK_0000146000 Parastrongyloides trichosuri PTRK_0000146000 N 0.470
PTRK_0000295600 Parastrongyloides trichosuri PTRK_0000295600 N 0.470
BXY_1648300 Bursaphelenchus xylophilus BXY_1648300 N 0.464
RSKR_0001028000 Rhabditophanes kr3021 RSKR_0001028000 N 0.463
SSTP_0000600400 Strongyloides stercoralis SSTP_0000600400 N 0.463
SPAL_0000268400 Strongyloides papillosus SPAL_0000268400 N 0.463
SVE_1898000 Strongyloides venezuelensis SVE_1898000 N 0.463
TCLT_0001028201 Thelazia callipaeda TCLT_0001028201 N 0.449
RSKR_0000113200 Rhabditophanes kr3021 RSKR_0000113200 N 0.443
nAv.1.0.1.g07983 Acanthocheilonema viteae nAv.1.0.1.g07983 N 0.431
Bm10737 Brugia malayi Bm10737 N 0.431
nDi.2.2.2.g05271 Dirofilaria immitis nDi.2.2.2.g05271 N 0.431
nLs.2.1.2.g07965 Litomosoides sigmodontis nLs.2.1.2.g07965 N 0.424
BTMF_0000904601 Brugia timori BTMF_0000904601 N 0.421
EEL_0000994401 Elaeophora elaphi EEL_0000994401 N 0.421
WUBG_09447 Wuchereria bancrofti WUBG_09447 N 0.421
nOo.2.0.1.g04772 Onchocerca ochengi nOo.2.0.1.g04772 N 0.421
WBGene00246118 Onchocerca volvulus WBGene00246118 N 0.421