L898_g23157 (Steinernema monticolum)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 L898_g23157 T336579_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
L898_g23157.t1 Sox 246 316

Links

Other Sox family TFs
Other Steinernema monticolum TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
L889_g27021 Steinernema feltiae L889_g27021 N 0.737
L893_g28874 Steinernema glaseri L893_g28874 N 0.724
L596_g6816 Steinernema carpocapsae L596_g6816 N 0.705
L892_g20462 Steinernema scapterisci L892_g20462 N 0.705
DME_0000639401 Dracunculus medinensis DME_0000639401 N 0.605
MhA1_Contig389.frz3.gene3 Meloidogyne hapla MhA1_Contig389.frz3.gene3 N 0.592
Minc08472 Meloidogyne incognita Minc08472 N 0.566
TCNE_0001183201 Toxocara canis TCNE_0001183201 N 0.564
ALUE_0001931801 Ascaris lumbricoides ALUE_0001931801 N 0.564
ASU_11889 Ascaris suum ASU_11889 N 0.564
SMUV_0000949901 Syphacia muris SMUV_0000949901 N 0.530
SSTP_0000600400 Strongyloides stercoralis SSTP_0000600400 N 0.497
SVE_1898000 Strongyloides venezuelensis SVE_1898000 N 0.497
SPAL_0000268400 Strongyloides papillosus SPAL_0000268400 N 0.497
RSKR_0001028000 Rhabditophanes kr3021 RSKR_0001028000 N 0.490
PTRK_0000295600 Parastrongyloides trichosuri PTRK_0000295600 N 0.490
PTRK_0000146000 Parastrongyloides trichosuri PTRK_0000146000 N 0.490
RSKR_0000113200 Rhabditophanes kr3021 RSKR_0000113200 N 0.470
BXY_1648300 Bursaphelenchus xylophilus BXY_1648300 N 0.464
nAv.1.0.1.g07983 Acanthocheilonema viteae nAv.1.0.1.g07983 N 0.451
nLs.2.1.2.g07965 Litomosoides sigmodontis nLs.2.1.2.g07965 N 0.451
nDi.2.2.2.g05271 Dirofilaria immitis nDi.2.2.2.g05271 N 0.451
Bm10737 Brugia malayi Bm10737 N 0.424