Tbx2 (Rattus norvegicus)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00907 (T-box) IPR001699 ENSRNOG00000003517 T340425_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Tbx2
M00830_2.00
Mus musculus
NYVDCACBHN

NDVGTGHBRN
PBM
Weirauch et al.(2013)
pTH3751
0.795 1.000
TBX2
M03556_2.00
Homo sapiens
GGTGTKADDWNTVACACB

VGTGTBANWHHTMACACC
SELEX
Jolma et al.(2013)
TBX2_1
0.795 1.000
TBX2
M03557_2.00
Homo sapiens
NAGGTGTBAWN

NWTVACACCTN
SELEX
Jolma et al.(2013)
TBX2_2
0.795 1.000
TBX2
M05799_2.00
Homo sapiens
NNVRCRCNNN

NNNGYGYBNN
SELEX
Yin et al.(2017)
TBX2_eDBD_HT-SELEX
0.795 1.000
Tbx2
M08044_2.00
Mus musculus
GCHYBCTGGGADHTGTAGTYH

DRACTACADHTCCCAGVRDGC
ChIP-seq
Chen et al.(2011)
SRP001585_Tbx2
0.795 1.000
TBX2
M11381_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX2_Q2
0.795 1.000
TBX2
M11382_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBX2_Q5
0.795 1.000
TBX2
M05800_2.00
Homo sapiens
NNVRCRCBNN

NNVGYGYBNN
SELEX
Yin et al.(2017)
TBX2_eDBD_Methyl-HT-SELEX
0.795 1.000
Tbx3
M00834_2.00
Mus musculus
NHNDCACNHN

NDNGTGHNDN
PBM
Weirauch et al.(2013)
pTH3998
0.781 0.957
TBX3
M05801_2.00
Homo sapiens
NDSGTGTBRN

NYVACACSHN
SELEX
Yin et al.(2017)
TBX3_eDBD_HT-SELEX
0.781 0.957
TBX3
M09426_2.00
Homo sapiens
DVDGGTGBNAR

YTNVCACCHBH
Misc
Kulakovskiy et al.(2013)
TBX3_HUMAN.H11MO.0.C
0.781 0.957
Tbx3
M09429_2.00
Mus musculus
RRGGTGBBR

YVVCACCYY
Misc
Kulakovskiy et al.(2013)
TBX3_MOUSE.H11MO.0.B
0.781 0.957
TBX3
M05802_2.00
Homo sapiens
DAGGTGTKAN

NTMACACCTH
SELEX
Yin et al.(2017)
TBX3_eDBD_Methyl-HT-SELEX
0.781 0.957
TBX2
M02495_2.00
Gasterosteus aculeatus
NNVDCACNHN

NDNGTGHBNN
PBM
Weirauch et al.(2014)
pTH9182
0.772 0.975
TBX2
M02496_2.00
Takifugu rubripes
DAGGTGTBRN

NYVACACCTH
PBM
Weirauch et al.(2014)
pTH9289
0.772 0.969
XP_008203914.1
M01029_2.00
Nasonia vitripennis
AGGTGTBA

TVACACCT
PBM
SebePedros et al.(2013)
pTH9336
0.748 0.877
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000004698 T-box 1 163

Links

Other T-box family TFs
Other Rattus norvegicus TFs

162 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSCSAG00000005940 Chlorocebus sabaeus ENSCSAG00000005940 I 0.920
ENSPPYG00000008798 Pongo abelii ENSPPYG00000008798 I 0.920
TBX2 Oryctolagus cuniculus ENSOCUG00000023498 I 0.863
ENSCSAG00000005933 Chlorocebus sabaeus ENSCSAG00000005933 I 0.816
TBX2 Callithrix jacchus ENSCJAG00000001256 I 0.814
TBX2 Gorilla gorilla ENSGGOG00000009144 I 0.814
TBX2 Felis catus ENSFCAG00000008993 N 0.814
ENSBTAP00000018970-D1 Bos grunniens ENSBTAP00000018970-D1 N 0.814
TBX2 Canis familiaris ENSCAFG00000017745 I 0.814
ENSMMUP00000012907 Macaca fascicularis ENSMMUP00000012907 I 0.814
ENSOARG00000016407 Ovis aries ENSOARG00000016407 N 0.814
HelroG156909 Helobdella robusta HelroG156909 N 0.797
Tbx2 Mus musculus ENSMUSG00000000093 D 0.795
Alligator_sinensis_CCG002051.1 Alligator sinensis Alligator_sinensis_CCG002051.1 I 0.795
ENSMPUG00000015118 Mustela putorius furo ENSMPUG00000015118 I 0.795
ENSGALG00000023577 Gallus gallus ENSGALG00000023577 I 0.795
ENSPSIG00000017536 Pelodiscus sinensis ENSPSIG00000017536 I 0.795
Ogr11256 Ophisaurus gracilis Ogr11256 I 0.795
TBX2 Monodelphis domestica ENSMODG00000014204 I 0.795
ENSNLEG00000000423 Nomascus leucogenys ENSNLEG00000000423 I 0.795
ENSLACG00000015364 Latimeria chalumnae ENSLACG00000015364 I 0.795
TBX2 Otolemur garnettii ENSOGAG00000014815 I 0.795
TBX2 Microcebus murinus ENSMICG00000016649 I 0.795
TBX2 Myotis lucifugus ENSMLUG00000011673 I 0.795
ENSMEUG00000010232 Macropus eugenii ENSMEUG00000010232 I 0.795
ENSFALG00000005458 Ficedula albicollis ENSFALG00000005458 I 0.795
TBX2 Loxodonta africana ENSLAFG00000006596 I 0.795
ENSLOCG00000005074 Lepisosteus oculatus ENSLOCG00000005074 I 0.795
TBX2 Ochotona princeps ENSOPRG00000012183 I 0.795
ENSMMUG00000009859 Macaca mulatta ENSMMUG00000009859 I 0.795
TBX2 Homo sapiens ENSG00000121068 D 0.795
ENSSTOG00000009350 Ictidomys tridecemlineatus ENSSTOG00000009350 I 0.795
TBX2 Pan troglodytes ENSPTRG00000009489 I 0.795
ENSCPOG00000001042 Cavia porcellus ENSCPOG00000001042 I 0.795
TBX2 Bos taurus ENSBTAG00000014278 I 0.795
tbx2 Xenopus tropicalis XB-GENE-1018115 I 0.795
TBX2 Tursiops truncatus ENSTTRG00000004541 I 0.795
tbx2.L Xenopus laevis XB-GENE-1018122 I 0.795
ENSAMEG00000008826 Ailuropoda melanoleuca ENSAMEG00000008826 I 0.795
ENSSHAG00000012290 Sarcophilus harrisii ENSSHAG00000012290 I 0.795
TBX2 Sus scrofa ENSSSCG00000027060 I 0.795
Pvit_13524 Pogona vitticeps Pvit_13524 I 0.795
tbx2a Danio rerio ENSDARG00000018025 I 0.795
tbx2b Danio rerio ENSDARG00000006120 I 0.793
ENSAMXG00000001528 Astyanax mexicanus ENSAMXG00000001528 I 0.793
HelroG77782 Helobdella robusta HelroG77782 N 0.792
AAI57537 Xenopus tropicalis AAI57537 I 0.789
tbx2.S Xenopus laevis XB-GENE-6255176 I 0.789
ENSAMXG00000007070 Astyanax mexicanus ENSAMXG00000007070 I 0.783
tbx2b Gasterosteus aculeatus ENSGACG00000020309 I 0.783
TBX3 Tupaia belangeri ENSTBEG00000014612 I 0.781
Tbx3 Rattus norvegicus ENSRNOG00000008706 I 0.781
ENSOARG00000006249 Ovis aries ENSOARG00000006249 I 0.781
ENSBTAP00000028930-D1 Bos grunniens ENSBTAP00000028930-D1 I 0.781
TBX2 Taeniopygia guttata ENSTGUG00000007813 I 0.781
TBX3 Oryctolagus cuniculus ENSOCUG00000014595 I 0.781
TBX3 Pan troglodytes ENSPTRG00000023749 I 0.781
ENSTSYG00000008994 Tarsius syrichta ENSTSYG00000008994 I 0.781
TBX3 Otolemur garnettii ENSOGAG00000016212 I 0.781
ENSPPYG00000004995 Pongo abelii ENSPPYG00000004995 I 0.781
TBX3 Sus scrofa ENSSSCG00000009865 I 0.781
Alligator_sinensis_CCG008095.1 Alligator sinensis Alligator_sinensis_CCG008095.1 I 0.781
TBX3 Ochotona princeps ENSOPRG00000004462 I 0.781
Cmyd_10018098 Chelonia mydas Cmyd_10018098 I 0.781
Afo_R010397 Aptenodytes forsteri Afo_R010397 I 0.781
ENSSHAG00000004253 Sarcophilus harrisii ENSSHAG00000004253 I 0.781
ENSSTOG00000009817 Ictidomys tridecemlineatus ENSSTOG00000009817 I 0.781
ENSPANG00000008730 Papio anubis ENSPANG00000008730 I 0.781
ENSMGAG00000010084 Meleagris gallopavo ENSMGAG00000010084 I 0.781
ENSECAG00000012861 Equus caballus ENSECAG00000012861 I 0.781
TBX3 Dasypus novemcinctus ENSDNOG00000044358 I 0.781
Pvit_16429 Pogona vitticeps Pvit_16429 I 0.781
TBX3 Erinaceus europaeus ENSEEUG00000008506 I 0.781
ENSFALG00000007792 Ficedula albicollis ENSFALG00000007792 I 0.781
Ogr02099 Ophisaurus gracilis Ogr02099 I 0.781
TBX3 Homo sapiens ENSG00000135111 D 0.781
ENSCSAG00000002344 Chlorocebus sabaeus ENSCSAG00000002344 I 0.781
TBX3 Cavia porcellus ENSCPOG00000003952 I 0.781
tbx3 Xenopus tropicalis XB-GENE-1018231 I 0.781
tbx3.S Xenopus laevis XB-GENE-1018237 I 0.781
tbx3.L Xenopus laevis XB-GENE-6252891 I 0.781
ENSAMEG00000001090 Ailuropoda melanoleuca ENSAMEG00000001090 I 0.781
TBX3 Bos taurus ENSBTAG00000021706 I 0.781
TBX3 Callithrix jacchus ENSCJAG00000009716 I 0.781
TBX3 Canis familiaris ENSCAFG00000009216 I 0.781
TBX3 Ornithorhynchus anatinus ENSOANG00000007095 I 0.781
ENSGALG00000008250 Gallus gallus ENSGALG00000008250 I 0.781
TBX3 Myotis lucifugus ENSMLUG00000007567 I 0.781
TBX3 Microcebus murinus ENSMICG00000010947 I 0.781
TBX3 Gorilla gorilla ENSGGOG00000004238 I 0.781
TBX3 Macaca mulatta ENSMMUG00000015070 I 0.781
ENSMPUG00000002720 Mustela putorius furo ENSMPUG00000002720 I 0.781
ENSNLEG00000000224 Nomascus leucogenys ENSNLEG00000000224 I 0.781
Tbx3 Mus musculus ENSMUSG00000018604 D 0.781
ENSLOCG00000007598 Lepisosteus oculatus ENSLOCG00000007598 I 0.781
ENSP00000257566 Macaca fascicularis ENSP00000257566 I 0.781
Myotis_brandtii_Tbx3_10028216 Myotis brandtii Myotis_brandtii_Tbx3_10028216 I 0.781
TBX3 Loxodonta africana ENSLAFG00000002948 I 0.781
ENSLACG00000006293 Latimeria chalumnae ENSLACG00000006293 I 0.781
PHUM322730 Pediculus humanus PHUM322730 N 0.780
ENSXMAG00000000486 Xiphophorus maculatus ENSXMAG00000000486 I 0.779
Gfo_R010838 Geospiza fortis Gfo_R010838 I 0.778
ENSONIG00000001919 Oreochromis niloticus ENSONIG00000001919 I 0.777
ENSPFOG00000021683 Poecilia formosa ENSPFOG00000021683 N 0.776
tbx3a Takifugu rubripes ENSTRUG00000015097 I 0.775
ENSXMAG00000005372 Xiphophorus maculatus ENSXMAG00000005372 I 0.775
tbx3a Oryzias latipes ENSORLG00000007316 I 0.775
ENSGMOG00000011728 Gadus morhua ENSGMOG00000011728 I 0.775
ENSONIG00000000187 Oreochromis niloticus ENSONIG00000000187 I 0.775
tbx3a Gasterosteus aculeatus ENSGACG00000016783 I 0.775
tbx3a Tetraodon nigroviridis ENSTNIG00000009035 I 0.775
ENSAMXG00000009197 Astyanax mexicanus ENSAMXG00000009197 I 0.775
ENSPFOG00000024759 Poecilia formosa ENSPFOG00000024759 I 0.775
tbx3a Danio rerio ENSDARG00000002216 I 0.775
ENSPFOG00000016384 Poecilia formosa ENSPFOG00000016384 I 0.772
tbx2b Oryzias latipes ENSORLG00000010011 I 0.772
ENSGMOG00000002896 Gadus morhua ENSGMOG00000002896 I 0.772
TBX2 Gasterosteus aculeatus ENSGACG00000013575 D 0.772
ENSPSIG00000006299 Pelodiscus sinensis ENSPSIG00000006299 N 0.772
ENSONIG00000010454 Oreochromis niloticus ENSONIG00000010454 I 0.772
TBX2 Oryzias latipes ENSORLG00000014792 I 0.772
ENSXMAG00000005715 Xiphophorus maculatus ENSXMAG00000005715 I 0.772
TBX2 Takifugu rubripes ENSTRUG00000008297 D 0.772
TBX4 Meleagris gallopavo ENSMGAG00000007617 I 0.771
TBX3 Monodelphis domestica ENSMODG00000012059 I 0.769
fgenesh2_pg.scaffold_89000016 Branchiostoma floridae fgenesh2_pg.scaffold_89000016 I 0.762
ACYPI000143 Acyrthosiphon pisum ACYPI000143 I 0.760
tetur33g01070 Tetranychus urticae tetur33g01070 I 0.759
TBX2 Tetraodon nigroviridis ENSTNIG00000014395 I 0.758
tbx2b Takifugu rubripes ENSTRUG00000009981 I 0.757
ENSCSAVG00000009650 Ciona savignyi ENSCSAVG00000009650 I 0.755
tbx3b Danio rerio ENSDARG00000061509 I 0.755
ISCW019283 Ixodes scapularis ISCW019283 N 0.755
TTRE_0000604401 Trichuris trichiura TTRE_0000604401 I 0.753
TMUE_s0121001900 Trichuris muris TMUE_s0121001900 I 0.753
D918_00588 Trichuris suis D918_00588 I 0.753
tbx2b Tetraodon nigroviridis ENSTNIG00000010765 I 0.751
GA22741 Drosophila pseudoobscura FBgn0244144 I 0.749
D917_09589 Trichinella nativa D917_09589 I 0.749
DAPPUDRAFT_13272 Daphnia pulex DAPPUDRAFT_13272 I 0.749
EFV62265 Trichinella spiralis EFV62265 I 0.749
bi Drosophila melanogaster FBgn0000179 I 0.749
AAEL018223 Aedes aegypti AAEL018223 I 0.749
HelroG63904 Helobdella robusta HelroG63904 I 0.749
SPU_023386 Strongylocentrotus purpuratus SPU_023386 I 0.749
GK15734 Drosophila willistoni FBgn0217737 I 0.749
GL14298 Drosophila persimilis FBgn0151903 I 0.749
GM12345 Drosophila sechellia FBgn0167282 I 0.749
GE16345 Drosophila yakuba FBgn0233875 I 0.749
bi Drosophila virilis FBgn0020983 I 0.749
GB49684 Apis mellifera GB49684 I 0.748
CGI_10016325 Crassostrea gigas CGI_10016325 I 0.748
XP_008203914.1 Nasonia vitripennis XP_008203914.1 D 0.748
Bm3498 Brugia malayi Bm3498 I 0.746
ASU_08095 Ascaris suum ASU_08095 I 0.745
WBGene00245873 Onchocerca volvulus WBGene00245873 I 0.742
Pvit_16634 Pogona vitticeps Pvit_16634 I 0.742
Cmyd_10016207 Chelonia mydas Cmyd_10016207 I 0.741
ENSOANG00000020395 Ornithorhynchus anatinus ENSOANG00000020395 I 0.532
ENSSARG00000001033 Sorex araneus ENSSARG00000001033 I 0.288
SMRZ_0000901601 Schistosoma margrebowiei SMRZ_0000901601 I 0.230
SCUD_0001668701 Schistosoma curassoni SCUD_0001668701 I 0.230