ORUFI07G03030 (Oryza rufipogon)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 ORUFI07G03030 T344214_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TCP24
M02499_2.00
Arabidopsis thaliana
NNNNRVMCVV

BBGKBYNNNN
PBM
Weirauch et al.(2014)
pTH7337
0.960 0.351
TCP24
M07272_2.00
Arabidopsis thaliana
GTGGGGACCAC

GTGGTCCCCAC
Dap-seq
OMalley et al.(2016)
TCP24_colamp_a
0.960 0.351
TCP24
M07273_2.00
Arabidopsis thaliana
NNBGGGACCACH

DGTGGTCCCVNN
Dap-seq
OMalley et al.(2016)
TCP24_col
0.960 0.351
TCP24
M02506_2.00
Arabidopsis lyrata
NBKKNNMMVN

NBKKNNMMVN
PBM
Weirauch et al.(2014)
pTH9227
0.959 0.351
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI07G03030.1 TCP 59 199
ORUFI07G03030.1 TCP 314 409

Links

Other TCP family TFs
Other Oryza rufipogon TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TCP24 Arabidopsis thaliana AT1G30210 D 0.960
TCP24 Arabidopsis lyrata fgenesh2_kg.1__3195__AT1G30210.2 D 0.959
Cla020670 Citrullus lanatus Cla020670 I 0.911
mgf014960m Mimulus guttatus mgf014960m I 0.913
mgf025386m Mimulus guttatus mgf025386m I 0.934
Bostr.15697s0315 Boechera stricta Bostr.15697s0315 I 0.961
Ciclev10007109m.g Citrus clementina Ciclev10007109m.g I 0.918
Ciclev10012612m.g Citrus clementina Ciclev10012612m.g I 0.918
Eucgr.G02354 Eucalyptus grandis Eucgr.G02354 I 0.908
gene10333-v1.0-hybrid Fragaria vesca gene10333-v1.0-hybrid I 0.916
Lus10017856.g Linum usitatissimum Lus10017856.g I 0.926
Lus10038512.g Linum usitatissimum Lus10038512.g I 0.959
Lus10042962.g Linum usitatissimum Lus10042962.g I 0.904
orange1.1g047495m.g Citrus sinensis orange1.1g047495m.g I 0.918
Thhalv10008175m.g Eutrema salsugineum Thhalv10008175m.g I 0.955
Thhalv10018773m.g Eutrema salsugineum Thhalv10018773m.g I 0.917
BRC1 Vitis vinifera VIT_17s0000g04180 I 0.929
Solyc02g089830.1 Solanum lycopersicum Solyc02g089830.1 I 0.916
BGIOSGA025162 Oryza indica BGIOSGA025162 I 0.978
Bo5g062580 Brassica oleracea Bo5g062580 I 0.963
Bo6g107240 Brassica oleracea Bo6g107240 I 0.911
Bra032365 Brassica rapa Bra032365 I 0.963
MTR_7g015010 Medicago truncatula MTR_7g015010 I 0.892
OBART07G03380 Oryza barthii OBART07G03380 I 0.981
OGLUM02G33090 Oryza glumaepatula OGLUM02G33090 I 0.923
OGLUM07G02670 Oryza glumaepatula OGLUM07G02670 I 0.977
ONIVA07G01330 Oryza nivara ONIVA07G01330 I 0.977
ORGLA07G0028600 Oryza glaberrima ORGLA07G0028600 I 0.977
ORUFI02G34160 Oryza rufipogon ORUFI02G34160 I 0.939
OS07G0152000 Oryza sativa OS07G0152000 I 0.978
PGSC0003DMG400010045 Solanum tuberosum PGSC0003DMG400010045 I 0.923
chr3.CM0282.560.nc Lotus japonicus chr3.CM0282.560.nc I 0.946
Bo9g052090 Brassica oleracea Bo9g052090 N 0.827