TCP24 (Arabidopsis thaliana)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 AT1G30210 T343675_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP24
M02499_2.00		 Arabidopsis thaliana
NNNNRVMCVV
BBGKBYNNNN		 PBM
Weirauch et al.(2014)
pTH7337		 (Direct) (Direct)
TCP24
M07272_2.00		 Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP24_colamp_a		 (Direct) (Direct)
TCP24
M07273_2.00		 Arabidopsis thaliana
NNBGGGACCACH
DGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
TCP24_col		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP24
M02506_2.00 		Arabidopsis lyrata
NBKKNNMMVN
NBKKNNMMVN		 PBM
Weirauch et al.(2014)
pTH9227 		0.981 0.951
For this family, TFs with SR scores > 0.822 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02499_2.00 TCP 48 141
M02499_2.00 TCP 112 165

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G30210.1 TCP 48 141
AT1G30210.1 TCP 112 165
AT1G30210.2 TCP 48 141
AT1G30210.2 TCP 112 165

Links

Other TCP family TFs
Other Arabidopsis thaliana TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCP24 Arabidopsis lyrata fgenesh2_kg.1__3195__AT1G30210.2 D 0.981
Bostr.15697s0315 Boechera stricta Bostr.15697s0315 I 0.980
Bo5g062580 Brassica oleracea Bo5g062580 I 0.973
Bra032365 Brassica rapa Bra032365 I 0.972
Lus10038512.g Linum usitatissimum Lus10038512.g I 0.964
Thhalv10008175m.g Eutrema salsugineum Thhalv10008175m.g I 0.962
ORUFI07G03030 Oryza rufipogon ORUFI07G03030 I 0.960
OBART07G03380 Oryza barthii OBART07G03380 I 0.957
OS07G0152000 Oryza sativa OS07G0152000 I 0.953
BGIOSGA025162 Oryza indica BGIOSGA025162 I 0.953
OGLUM07G02670 Oryza glumaepatula OGLUM07G02670 I 0.952
ONIVA07G01330 Oryza nivara ONIVA07G01330 I 0.952
ORGLA07G0028600 Oryza glaberrima ORGLA07G0028600 I 0.952
chr3.CM0282.560.nc Lotus japonicus chr3.CM0282.560.nc I 0.945
ORUFI02G34160 Oryza rufipogon ORUFI02G34160 I 0.939
PGSC0003DMG400010045 Solanum tuberosum PGSC0003DMG400010045 I 0.932
BRC1 Vitis vinifera VIT_17s0000g04180 I 0.931
Lus10017856.g Linum usitatissimum Lus10017856.g I 0.929
Cla020670 Citrullus lanatus Cla020670 I 0.929
Solyc02g089830.1 Solanum lycopersicum Solyc02g089830.1 I 0.925
mgf025386m Mimulus guttatus mgf025386m I 0.925
orange1.1g047495m.g Citrus sinensis orange1.1g047495m.g I 0.924
Ciclev10012612m.g Citrus clementina Ciclev10012612m.g I 0.924
Ciclev10007109m.g Citrus clementina Ciclev10007109m.g I 0.924
gene10333-v1.0-hybrid Fragaria vesca gene10333-v1.0-hybrid I 0.923
OGLUM02G33090 Oryza glumaepatula OGLUM02G33090 I 0.922
Eucgr.G02354 Eucalyptus grandis Eucgr.G02354 I 0.921
Thhalv10018773m.g Eutrema salsugineum Thhalv10018773m.g I 0.917
MTR_7g015010 Medicago truncatula MTR_7g015010 I 0.906
Bo6g107240 Brassica oleracea Bo6g107240 I 0.906
Lus10042962.g Linum usitatissimum Lus10042962.g I 0.898
mgf014960m Mimulus guttatus mgf014960m I 0.897