MTR_0002s1250 (Medicago truncatula)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 MTR_0002s1250 T353230_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY38
M00901_2.00
Arabidopsis thaliana
NNRGTCAACBN

NVGTTGACYNN
PBM
Franco-Zorrilla et al.(2014)
WRKY38
0.811 0.508
WRKY62
M02561_2.00
Arabidopsis thaliana
TRGTCAAM

KTTGACYA
PBM
Weirauch et al.(2014)
pTH8246
0.810 0.542
WRKY70
M07399_2.00
Arabidopsis thaliana
HAAAGTCAACGNN

NNCGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY70_col
0.809 0.542
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH17744 WRKY 111 171

Links

Other WRKY family TFs
Other Medicago truncatula TFs

116 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
WRKY70 Arabidopsis thaliana AT3G56400 D 0.809
WRKY62 Arabidopsis thaliana AT5G01900 D 0.810
WRKY38 Arabidopsis thaliana AT5G22570 D 0.811
PRUPE_ppa020736mg Prunus persica PRUPE_ppa020736mg I 0.831
Pm003013 Prunus mume Pm003013 I 0.814
Pm003014 Prunus mume Pm003014 I 0.831
Pm003015 Prunus mume Pm003015 I 0.814
Pm019286 Prunus mume Pm019286 I 0.808
29729.m002369 Ricinus communis 29729.m002369 I 0.829
29915.m000479 Ricinus communis 29915.m000479 I 0.824
cassava25180.valid.m1 Manihot esculenta cassava25180.valid.m1 I 0.819
cassava36286.valid.m1 Manihot esculenta cassava36286.valid.m1 I 0.824
cassava43790.valid.m1 Manihot esculenta cassava43790.valid.m1 I 0.819
cassava7524.valid.m1 Manihot esculenta cassava7524.valid.m1 I 0.821
cassava7525.valid.m1 Manihot esculenta cassava7525.valid.m1 I 0.821
Cla018337 Citrullus lanatus Cla018337 I 0.834
Ca_18932 Cicer arietinum Ca_18932 I 0.843
PRUPE_ppa026704mg Prunus persica PRUPE_ppa026704mg I 0.814
Gorai.005G003900 Gossypium raimondii Gorai.005G003900 I 0.814
Sb08g005080 Sorghum bicolor Sb08g005080 I 0.808
WRKY38 Arabidopsis lyrata scaffold_602308.1 I 0.811
Si025181m.g Setaria italica Si025181m.g I 0.812
Solyc03g095770.2 Solanum lycopersicum Solyc03g095770.2 I 0.824
Solyc09g015770.2 Solanum lycopersicum Solyc09g015770.2 I 0.842
TCM_019689 Theobroma cacao TCM_019689 I 0.826
VIT_13s0067g03140 Vitis vinifera VIT_13s0067g03140 I 0.813
Ca_04100 Cicer arietinum Ca_04100 I 0.815
Ca_12915 Cicer arietinum Ca_12915 I 0.862
Cucsa.177060 Cucumis sativus Cucsa.177060 I 0.835
mgf009193m Mimulus guttatus mgf009193m I 0.811
Aquca_027_00037 Aquilegia coerulea Aquca_027_00037 I 0.810
MDP0000754989 Malus domestica MDP0000754989 I 0.813
orange1.1g018407m.g Citrus sinensis orange1.1g018407m.g I 0.811
orange1.1g020291m.g Citrus sinensis orange1.1g020291m.g I 0.813
orange1.1g021598m.g Citrus sinensis orange1.1g021598m.g I 0.814
SapurV1A.0065s0580 Salix purpurea SapurV1A.0065s0580 I 0.832
SapurV1A.0356s0010 Salix purpurea SapurV1A.0356s0010 I 0.823
SapurV1A.0914s0120 Salix purpurea SapurV1A.0914s0120 I 0.823
Thhalv10006146m.g Eutrema salsugineum Thhalv10006146m.g I 0.809
Thhalv10014700m.g Eutrema salsugineum Thhalv10014700m.g I 0.813
PK03324.1 Cannabis sativa PK03324.1 I 0.814
PK21378.1 Cannabis sativa PK21378.1 I 0.812
Lus10030517.g Linum usitatissimum Lus10030517.g I 0.819
Lus10025216.g Linum usitatissimum Lus10025216.g I 0.816
Bostr.20129s0455 Boechera stricta Bostr.20129s0455 I 0.815
Carubv10022120m.g Capsella rubella Carubv10022120m.g I 0.816
Ciclev10012055m.g Citrus clementina Ciclev10012055m.g I 0.813
Ciclev10032192m.g Citrus clementina Ciclev10032192m.g I 0.814
Ciclev10033384m.g Citrus clementina Ciclev10033384m.g I 0.811
Eucgr.K01289 Eucalyptus grandis Eucgr.K01289 I 0.820
evm.TU.supercontig_86.64 Carica papaya evm.TU.supercontig_86.64 I 0.809
evm.TU.supercontig_86.65 Carica papaya evm.TU.supercontig_86.65 I 0.809
gene13546-v1.0-hybrid Fragaria vesca gene13546-v1.0-hybrid I 0.810
gene13549-v1.0-hybrid Fragaria vesca gene13549-v1.0-hybrid I 0.819
gene13554-v1.0-hybrid Fragaria vesca gene13554-v1.0-hybrid I 0.819
PDK_20s1519811g002 Phoenix dactylifera PDK_20s1519811g002 I 0.816
POPTR_0016s14490 Populus trichocarpa POPTR_0016s14490 I 0.834
GLYMA13G34240 Glycine max GLYMA13G34240 I 0.825
WRKY62 Arabidopsis lyrata Al_scaffold_0006_13 I 0.810
GLYMA13G34251 Glycine max GLYMA13G34251 I 0.812
MTR_3g093830 Medicago truncatula MTR_3g093830 I 0.808
GLYMA13G34261 Glycine max GLYMA13G34261 I 0.815
GLYMA13G34281 Glycine max GLYMA13G34281 I 0.815
GLYMA14G36430 Glycine max GLYMA14G36430 I 0.808
MTR_8g005750 Medicago truncatula MTR_8g005750 I 0.839
MTR_7g073430 Medicago truncatula MTR_7g073430 I 0.824
MTR_7g073380 Medicago truncatula MTR_7g073380 I 0.841
GLYMA16G34590 Glycine max GLYMA16G34590 I 0.844
MTR_2g075750 Medicago truncatula MTR_2g075750 I 0.834
MTR_2g075700 Medicago truncatula MTR_2g075700 I 0.849
MTR_2g075690 Medicago truncatula MTR_2g075690 I 0.849
MTR_2g075680 Medicago truncatula MTR_2g075680 I 0.851
MTR_2g075610 Medicago truncatula MTR_2g075610 I 0.834
GLYMA18G44560 Glycine max GLYMA18G44560 I 0.812
GLYMA09G41050 Glycine max GLYMA09G41050 I 0.830
GLYMA06G14720 Glycine max GLYMA06G14720 I 0.811
POPTR_0006s10950 Populus trichocarpa POPTR_0006s10950 I 0.820
PGSC0003DMG400029207 Solanum tuberosum PGSC0003DMG400029207 I 0.842
PGSC0003DMG400027582 Solanum tuberosum PGSC0003DMG400027582 I 0.836
PGSC0003DMG400020608 Solanum tuberosum PGSC0003DMG400020608 I 0.826
PGSC0003DMG400008391 Solanum tuberosum PGSC0003DMG400008391 I 0.846
Bo01002s040 Brassica oleracea Bo01002s040 I 0.820
Bra002421 Brassica rapa Bra002421 I 0.820
Bra028918 Brassica rapa Bra028918 I 0.814
Ca_09495 Cicer arietinum Ca_09495 I 0.837
GLYMA04G40130 Glycine max GLYMA04G40130 I 0.811
GLYMA03G00460 Glycine max GLYMA03G00460 I 0.843
WRKY70 Arabidopsis lyrata fgenesh2_kg.5__2072__AT3G56400.1 I 0.810
Sb08g002590 Sorghum bicolor Sb08g002590 N 0.810
F775_28648 Aegilops tauschii F775_28648 N 0.809
BGIOSGA034615 Oryza indica BGIOSGA034615 N 0.810
BGIOSGA036759 Oryza indica BGIOSGA036759 N 0.810
BRADI4G25717 Brachypodium distachyon BRADI4G25717 N 0.810
LPERR11G00950 Leersia perrieri LPERR11G00950 N 0.810
LPERR12G01060 Leersia perrieri LPERR12G01060 N 0.810
ORGLA12G0007300 Oryza glaberrima ORGLA12G0007300 N 0.810
ORUFI11G01040 Oryza rufipogon ORUFI11G01040 N 0.810
Traes_4DS_FE38A59D0 Triticum aestivum Traes_4DS_FE38A59D0 N 0.809
Traes_4BS_A6D9EB0E5 Triticum aestivum Traes_4BS_A6D9EB0E5 N 0.809
Traes_4AL_9E0D1CFA6 Triticum aestivum Traes_4AL_9E0D1CFA6 N 0.809
ORUFI12G01160 Oryza rufipogon ORUFI12G01160 N 0.810
OS11G0116900 Oryza sativa OS11G0116900 N 0.810
OS12G0116400 Oryza sativa OS12G0116400 N 0.810
Si026831m.g Setaria italica Si026831m.g N 0.810
ORGLA11G0201700 Oryza glaberrima ORGLA11G0201700 N 0.810
OPUNC12G00960 Oryza punctata OPUNC12G00960 N 0.810
MLOC_34522 Hordeum vulgare MLOC_34522 N 0.809
OBART11G01090 Oryza barthii OBART11G01090 N 0.810
MTR_8g032510 Medicago truncatula MTR_8g032510 N 0.861
OB11G10740 Oryza brachyantha OB11G10740 N 0.815
OB12G11010 Oryza brachyantha OB12G11010 N 0.810
OBART12G00820 Oryza barthii OBART12G00820 N 0.810
OGLUM12G01270 Oryza glumaepatula OGLUM12G01270 N 0.810
ONIVA11G01030 Oryza nivara ONIVA11G01030 N 0.810
OPUNC11G00940 Oryza punctata OPUNC11G00940 N 0.810
Si011007m.g Setaria italica Si011007m.g N 0.810