MTR_0002s1250 (Medicago truncatula)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 MTR_0002s1250 T353230_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY38
M00901_2.00 		Arabidopsis thaliana
NNRGTCAACBN
NVGTTGACYNN		 PBM
Franco-Zorrilla et al.(2014)
WRKY38 		0.811 0.508
WRKY62
M02561_2.00 		Arabidopsis thaliana
TRGTCAAM
KTTGACYA		 PBM
Weirauch et al.(2014)
pTH8246 		0.810 0.542
WRKY70
M07399_2.00 		Arabidopsis thaliana
HAAAGTCAACGNN
NNCGTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY70_col 		0.809 0.542
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH17744 WRKY 111 171

Links

Other WRKY family TFs
Other Medicago truncatula TFs

116 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ca_12915 Cicer arietinum Ca_12915 I 0.862
MTR_8g032510 Medicago truncatula MTR_8g032510 N 0.861
MTR_2g075680 Medicago truncatula MTR_2g075680 I 0.851
MTR_2g075690 Medicago truncatula MTR_2g075690 I 0.849
MTR_2g075700 Medicago truncatula MTR_2g075700 I 0.849
PGSC0003DMG400008391 Solanum tuberosum PGSC0003DMG400008391 I 0.846
GLYMA16G34590 Glycine max GLYMA16G34590 I 0.844
Ca_18932 Cicer arietinum Ca_18932 I 0.843
GLYMA03G00460 Glycine max GLYMA03G00460 I 0.843
PGSC0003DMG400029207 Solanum tuberosum PGSC0003DMG400029207 I 0.842
Solyc09g015770.2 Solanum lycopersicum Solyc09g015770.2 I 0.842
MTR_7g073380 Medicago truncatula MTR_7g073380 I 0.841
MTR_8g005750 Medicago truncatula MTR_8g005750 I 0.839
Ca_09495 Cicer arietinum Ca_09495 I 0.837
PGSC0003DMG400027582 Solanum tuberosum PGSC0003DMG400027582 I 0.836
Cucsa.177060 Cucumis sativus Cucsa.177060 I 0.835
MTR_2g075750 Medicago truncatula MTR_2g075750 I 0.834
MTR_2g075610 Medicago truncatula MTR_2g075610 I 0.834
Cla018337 Citrullus lanatus Cla018337 I 0.834
POPTR_0016s14490 Populus trichocarpa POPTR_0016s14490 I 0.834
SapurV1A.0065s0580 Salix purpurea SapurV1A.0065s0580 I 0.832
Pm003014 Prunus mume Pm003014 I 0.831
PRUPE_ppa020736mg Prunus persica PRUPE_ppa020736mg I 0.831
GLYMA09G41050 Glycine max GLYMA09G41050 I 0.830
29729.m002369 Ricinus communis 29729.m002369 I 0.829
TCM_019689 Theobroma cacao TCM_019689 I 0.826
PGSC0003DMG400020608 Solanum tuberosum PGSC0003DMG400020608 I 0.826
GLYMA13G34240 Glycine max GLYMA13G34240 I 0.825
cassava36286.valid.m1 Manihot esculenta cassava36286.valid.m1 I 0.824
MTR_7g073430 Medicago truncatula MTR_7g073430 I 0.824
Solyc03g095770.2 Solanum lycopersicum Solyc03g095770.2 I 0.824
29915.m000479 Ricinus communis 29915.m000479 I 0.824
SapurV1A.0356s0010 Salix purpurea SapurV1A.0356s0010 I 0.823
SapurV1A.0914s0120 Salix purpurea SapurV1A.0914s0120 I 0.823
cassava7524.valid.m1 Manihot esculenta cassava7524.valid.m1 I 0.821
cassava7525.valid.m1 Manihot esculenta cassava7525.valid.m1 I 0.821
Eucgr.K01289 Eucalyptus grandis Eucgr.K01289 I 0.820
POPTR_0006s10950 Populus trichocarpa POPTR_0006s10950 I 0.820
Bra002421 Brassica rapa Bra002421 I 0.820
Bo01002s040 Brassica oleracea Bo01002s040 I 0.820
gene13554-v1.0-hybrid Fragaria vesca gene13554-v1.0-hybrid I 0.819
cassava25180.valid.m1 Manihot esculenta cassava25180.valid.m1 I 0.819
Lus10030517.g Linum usitatissimum Lus10030517.g I 0.819
cassava43790.valid.m1 Manihot esculenta cassava43790.valid.m1 I 0.819
gene13549-v1.0-hybrid Fragaria vesca gene13549-v1.0-hybrid I 0.819
PDK_20s1519811g002 Phoenix dactylifera PDK_20s1519811g002 I 0.816
Carubv10022120m.g Capsella rubella Carubv10022120m.g I 0.816
Lus10025216.g Linum usitatissimum Lus10025216.g I 0.816
Ca_04100 Cicer arietinum Ca_04100 I 0.815
GLYMA13G34261 Glycine max GLYMA13G34261 I 0.815
Bostr.20129s0455 Boechera stricta Bostr.20129s0455 I 0.815
OB11G10740 Oryza brachyantha OB11G10740 N 0.815
GLYMA13G34281 Glycine max GLYMA13G34281 I 0.815
orange1.1g021598m.g Citrus sinensis orange1.1g021598m.g I 0.814
Pm003015 Prunus mume Pm003015 I 0.814
Ciclev10032192m.g Citrus clementina Ciclev10032192m.g I 0.814
Gorai.005G003900 Gossypium raimondii Gorai.005G003900 I 0.814
Pm003013 Prunus mume Pm003013 I 0.814
PK03324.1 Cannabis sativa PK03324.1 I 0.814
PRUPE_ppa026704mg Prunus persica PRUPE_ppa026704mg I 0.814
Bra028918 Brassica rapa Bra028918 I 0.814
orange1.1g020291m.g Citrus sinensis orange1.1g020291m.g I 0.813
Ciclev10012055m.g Citrus clementina Ciclev10012055m.g I 0.813
VIT_13s0067g03140 Vitis vinifera VIT_13s0067g03140 I 0.813
MDP0000754989 Malus domestica MDP0000754989 I 0.813
Thhalv10014700m.g Eutrema salsugineum Thhalv10014700m.g I 0.813
Si025181m.g Setaria italica Si025181m.g I 0.812
GLYMA13G34251 Glycine max GLYMA13G34251 I 0.812
GLYMA18G44560 Glycine max GLYMA18G44560 I 0.812
PK21378.1 Cannabis sativa PK21378.1 I 0.812
WRKY38 Arabidopsis thaliana AT5G22570 D 0.811
GLYMA06G14720 Glycine max GLYMA06G14720 I 0.811
GLYMA04G40130 Glycine max GLYMA04G40130 I 0.811
orange1.1g018407m.g Citrus sinensis orange1.1g018407m.g I 0.811
WRKY38 Arabidopsis lyrata scaffold_602308.1 I 0.811
Ciclev10033384m.g Citrus clementina Ciclev10033384m.g I 0.811
mgf009193m Mimulus guttatus mgf009193m I 0.811
LPERR11G00950 Leersia perrieri LPERR11G00950 N 0.810
Aquca_027_00037 Aquilegia coerulea Aquca_027_00037 I 0.810
WRKY70 Arabidopsis lyrata fgenesh2_kg.5__2072__AT3G56400.1 I 0.810
BGIOSGA034615 Oryza indica BGIOSGA034615 N 0.810
BGIOSGA036759 Oryza indica BGIOSGA036759 N 0.810
WRKY62 Arabidopsis thaliana AT5G01900 D 0.810
BRADI4G25717 Brachypodium distachyon BRADI4G25717 N 0.810
gene13546-v1.0-hybrid Fragaria vesca gene13546-v1.0-hybrid I 0.810
LPERR12G01060 Leersia perrieri LPERR12G01060 N 0.810
OS11G0116900 Oryza sativa OS11G0116900 N 0.810
ORUFI12G01160 Oryza rufipogon ORUFI12G01160 N 0.810
ORUFI11G01040 Oryza rufipogon ORUFI11G01040 N 0.810
ORGLA11G0201700 Oryza glaberrima ORGLA11G0201700 N 0.810
OS12G0116400 Oryza sativa OS12G0116400 N 0.810
WRKY62 Arabidopsis lyrata Al_scaffold_0006_13 I 0.810
Si011007m.g Setaria italica Si011007m.g N 0.810
Si026831m.g Setaria italica Si026831m.g N 0.810
Sb08g002590 Sorghum bicolor Sb08g002590 N 0.810
OPUNC12G00960 Oryza punctata OPUNC12G00960 N 0.810
ORGLA12G0007300 Oryza glaberrima ORGLA12G0007300 N 0.810
OBART11G01090 Oryza barthii OBART11G01090 N 0.810
OBART12G00820 Oryza barthii OBART12G00820 N 0.810
OGLUM12G01270 Oryza glumaepatula OGLUM12G01270 N 0.810
OB12G11010 Oryza brachyantha OB12G11010 N 0.810
ONIVA11G01030 Oryza nivara ONIVA11G01030 N 0.810
OPUNC11G00940 Oryza punctata OPUNC11G00940 N 0.810
Traes_4AL_9E0D1CFA6 Triticum aestivum Traes_4AL_9E0D1CFA6 N 0.809
Thhalv10006146m.g Eutrema salsugineum Thhalv10006146m.g I 0.809
WRKY70 Arabidopsis thaliana AT3G56400 D 0.809
Traes_4BS_A6D9EB0E5 Triticum aestivum Traes_4BS_A6D9EB0E5 N 0.809
Traes_4DS_FE38A59D0 Triticum aestivum Traes_4DS_FE38A59D0 N 0.809
evm.TU.supercontig_86.65 Carica papaya evm.TU.supercontig_86.65 I 0.809
MLOC_34522 Hordeum vulgare MLOC_34522 N 0.809
F775_28648 Aegilops tauschii F775_28648 N 0.809
evm.TU.supercontig_86.64 Carica papaya evm.TU.supercontig_86.64 I 0.809
MTR_3g093830 Medicago truncatula MTR_3g093830 I 0.808
Pm019286 Prunus mume Pm019286 I 0.808
GLYMA14G36430 Glycine max GLYMA14G36430 I 0.808
Sb08g005080 Sorghum bicolor Sb08g005080 I 0.808