Lus10025216.g (Linum usitatissimum)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Lus10025216.g T356430_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY55
M07392_2.00 		Arabidopsis thaliana
HWAGTCAACGNH
DNCGTTGACTWD		 Dap-seq
OMalley et al.(2016)
WRKY55_col_a 		0.812 0.567
WRKY63
M02546_2.00 		Arabidopsis thaliana
NGGTCAAN
NTTGACCN		 PBM
Weirauch et al.(2014)
pTH8182 		0.809 0.583
WRKY38
M00901_2.00 		Arabidopsis thaliana
NNRGTCAACBN
NVGTTGACYNN		 PBM
Franco-Zorrilla et al.(2014)
WRKY38 		0.809 0.500
WRKY70
M07399_2.00 		Arabidopsis thaliana
HAAAGTCAACGNN
NNCGTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY70_col 		0.808 0.567
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10025216 WRKY 133 194

Links

Other WRKY family TFs
Other Linum usitatissimum TFs

228 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10025133.g Linum usitatissimum Lus10025133.g I 0.888
Cla018337 Citrullus lanatus Cla018337 I 0.848
MTR_7g073430 Medicago truncatula MTR_7g073430 I 0.847
MTR_7g073380 Medicago truncatula MTR_7g073380 I 0.847
MTR_8g005750 Medicago truncatula MTR_8g005750 I 0.846
Ca_09495 Cicer arietinum Ca_09495 I 0.842
Cucsa.177060 Cucumis sativus Cucsa.177060 I 0.840
Ca_18932 Cicer arietinum Ca_18932 I 0.838
PGSC0003DMG400029207 Solanum tuberosum PGSC0003DMG400029207 I 0.837
TCM_019689 Theobroma cacao TCM_019689 I 0.837
Solyc09g015770.2 Solanum lycopersicum Solyc09g015770.2 I 0.837
evm.TU.supercontig_86.65 Carica papaya evm.TU.supercontig_86.65 I 0.836
GLYMA09G41050 Glycine max GLYMA09G41050 I 0.834
Eucgr.K01289 Eucalyptus grandis Eucgr.K01289 I 0.833
POPTR_0016s14490 Populus trichocarpa POPTR_0016s14490 I 0.833
cassava25180.valid.m1 Manihot esculenta cassava25180.valid.m1 I 0.832
SapurV1A.0065s0580 Salix purpurea SapurV1A.0065s0580 I 0.831
POPTR_0006s10950 Populus trichocarpa POPTR_0006s10950 I 0.831
29915.m000479 Ricinus communis 29915.m000479 I 0.830
cassava36286.valid.m1 Manihot esculenta cassava36286.valid.m1 I 0.829
Lus10014177.g Linum usitatissimum Lus10014177.g I 0.829
PDK_20s1519811g002 Phoenix dactylifera PDK_20s1519811g002 I 0.829
PGSC0003DMG400027582 Solanum tuberosum PGSC0003DMG400027582 I 0.828
GLYMA03G00460 Glycine max GLYMA03G00460 I 0.827
PGSC0003DMG400008391 Solanum tuberosum PGSC0003DMG400008391 I 0.827
evm.TU.supercontig_86.64 Carica papaya evm.TU.supercontig_86.64 I 0.827
LPERR08G11030 Leersia perrieri LPERR08G11030 I 0.826
orange1.1g020291m.g Citrus sinensis orange1.1g020291m.g I 0.825
gene13547-v1.0-hybrid Fragaria vesca gene13547-v1.0-hybrid I 0.825
GLYMA19G44380 Glycine max GLYMA19G44380 I 0.825
Ciclev10012055m.g Citrus clementina Ciclev10012055m.g I 0.825
GLYMA16G34590 Glycine max GLYMA16G34590 I 0.824
SapurV1A.0356s0010 Salix purpurea SapurV1A.0356s0010 I 0.822
SapurV1A.0914s0120 Salix purpurea SapurV1A.0914s0120 I 0.822
MTR_2g075700 Medicago truncatula MTR_2g075700 I 0.821
Si026831m.g Setaria italica Si026831m.g N 0.821
PK03324.1 Cannabis sativa PK03324.1 I 0.821
Si011007m.g Setaria italica Si011007m.g N 0.821
29729.m002369 Ricinus communis 29729.m002369 I 0.821
Eucgr.G03145 Eucalyptus grandis Eucgr.G03145 I 0.821
LPERR11G00950 Leersia perrieri LPERR11G00950 N 0.820
OBART11G01090 Oryza barthii OBART11G01090 N 0.820
OB12G11010 Oryza brachyantha OB12G11010 N 0.820
LPERR12G01060 Leersia perrieri LPERR12G01060 N 0.820
Pm003015 Prunus mume Pm003015 I 0.820
cassava43790.valid.m1 Manihot esculenta cassava43790.valid.m1 I 0.820
OBART12G00820 Oryza barthii OBART12G00820 N 0.820
ORGLA11G0201700 Oryza glaberrima ORGLA11G0201700 N 0.820
ORGLA12G0007300 Oryza glaberrima ORGLA12G0007300 N 0.820
OS11G0116900 Oryza sativa OS11G0116900 N 0.820
OPUNC12G00960 Oryza punctata OPUNC12G00960 N 0.820
OPUNC11G00940 Oryza punctata OPUNC11G00940 N 0.820
OGLUM12G01270 Oryza glumaepatula OGLUM12G01270 N 0.820
ONIVA11G01030 Oryza nivara ONIVA11G01030 N 0.820
OS12G0116400 Oryza sativa OS12G0116400 N 0.820
ORUFI12G01160 Oryza rufipogon ORUFI12G01160 N 0.820
ORUFI11G01040 Oryza rufipogon ORUFI11G01040 N 0.820
GLYMA18G44560 Glycine max GLYMA18G44560 I 0.820
BGIOSGA036759 Oryza indica BGIOSGA036759 N 0.820
BRADI4G25717 Brachypodium distachyon BRADI4G25717 N 0.820
BGIOSGA034615 Oryza indica BGIOSGA034615 N 0.820
Pavir.J31578 Panicum virgatum Pavir.J31578 N 0.819
VIT_13s0067g03140 Vitis vinifera VIT_13s0067g03140 I 0.819
mgf002542m Mimulus guttatus mgf002542m I 0.819
Gorai.005G003900 Gossypium raimondii Gorai.005G003900 I 0.819
OPUNC09G05480 Oryza punctata OPUNC09G05480 I 0.819
Lus10030517.g Linum usitatissimum Lus10030517.g I 0.819
Lus10022736.g Linum usitatissimum Lus10022736.g I 0.818
PGSC0003DMG400020608 Solanum tuberosum PGSC0003DMG400020608 I 0.818
GSMUA_Achr8G01730_001 Musa acuminata GSMUA_Achr8G01730_001 I 0.818
LjT41F16.60.nd Lotus japonicus LjT41F16.60.nd I 0.818
MTR_2g075610 Medicago truncatula MTR_2g075610 I 0.817
MTR_2g075750 Medicago truncatula MTR_2g075750 I 0.817
Bo4g012750 Brassica oleracea Bo4g012750 I 0.817
Carubv10024972m.g Capsella rubella Carubv10024972m.g I 0.816
Pm003014 Prunus mume Pm003014 I 0.816
Traes_6AS_68775100B Triticum aestivum Traes_6AS_68775100B I 0.816
Aquca_027_00037 Aquilegia coerulea Aquca_027_00037 I 0.816
Ca_04100 Cicer arietinum Ca_04100 I 0.816
Cagra.1642s0039 Capsella grandiflora Cagra.1642s0039 I 0.816
MTR_0002s1250 Medicago truncatula MTR_0002s1250 I 0.816
PRUPE_ppa020736mg Prunus persica PRUPE_ppa020736mg I 0.816
Solyc03g095770.2 Solanum lycopersicum Solyc03g095770.2 I 0.816
LjSGA_021425.1 Lotus japonicus LjSGA_021425.1 I 0.816
MTR_8g027860 Medicago truncatula MTR_8g027860 I 0.816
OB11G10740 Oryza brachyantha OB11G10740 N 0.816
F775_25840 Aegilops tauschii F775_25840 I 0.815
ORGLA05G0099300 Oryza glaberrima ORGLA05G0099300 I 0.815
Si025307m.g Setaria italica Si025307m.g I 0.815
ORUFI05G12690 Oryza rufipogon ORUFI05G12690 I 0.815
Pavir.Ca01708 Panicum virgatum Pavir.Ca01708 I 0.815
OS05G0321900 Oryza sativa OS05G0321900 I 0.815
BRADI2G30800 Brachypodium distachyon BRADI2G30800 I 0.815
SapurV1A.0377s0020 Salix purpurea SapurV1A.0377s0020 I 0.815
POPTR_0012s01380 Populus trichocarpa POPTR_0012s01380 I 0.815
OMERI09G04750 Oryza meridionalis OMERI09G04750 I 0.815
OGLUM05G12420 Oryza glumaepatula OGLUM05G12420 I 0.815
OGLUM09G06630 Oryza glumaepatula OGLUM09G06630 I 0.815
OBART09G06020 Oryza barthii OBART09G06020 I 0.815
OBART05G11690 Oryza barthii OBART05G11690 I 0.815
OB05G27840 Oryza brachyantha OB05G27840 N 0.815
BGIOSGA019620 Oryza indica BGIOSGA019620 I 0.815
OLONG_021880 Oryza longistaminata OLONG_021880 I 0.815
OMERI05G10350 Oryza meridionalis OMERI05G10350 I 0.815
GLYMA13G34251 Glycine max GLYMA13G34251 I 0.815
ONIVA05G12080 Oryza nivara ONIVA05G12080 I 0.815
LPERR05G09170 Leersia perrieri LPERR05G09170 I 0.815
OPUNC05G10010 Oryza punctata OPUNC05G10010 I 0.815
SapurV1A.1043s0030 Salix purpurea SapurV1A.1043s0030 I 0.815
Pavir.Ca00459 Panicum virgatum Pavir.Ca00459 I 0.814
LPERR09G04330 Leersia perrieri LPERR09G04330 I 0.814
Pavir.Fa01520 Panicum virgatum Pavir.Fa01520 I 0.814
Ciclev10033384m.g Citrus clementina Ciclev10033384m.g I 0.814
orange1.1g018407m.g Citrus sinensis orange1.1g018407m.g I 0.814
Bra004586 Brassica rapa Bra004586 I 0.814
BGIOSGA040489 Oryza indica BGIOSGA040489 I 0.814
Bo4g190390 Brassica oleracea Bo4g190390 I 0.814
Bra000202 Brassica rapa Bra000202 I 0.814
VIT_16s0050g02510 Vitis vinifera VIT_16s0050g02510 I 0.814
Traes_2BS_B65714572 Triticum aestivum Traes_2BS_B65714572 I 0.814
Bo3g035130 Brassica oleracea Bo3g035130 I 0.814
Traes_2AS_6269D889E Triticum aestivum Traes_2AS_6269D889E I 0.814
Bra016974 Brassica rapa Bra016974 I 0.814
SapurV1A.2126s0010 Salix purpurea SapurV1A.2126s0010 I 0.814
ONIVA08G13920 Oryza nivara ONIVA08G13920 I 0.814
OS08G0386200 Oryza sativa OS08G0386200 I 0.814
AC205562.3_FG002 Zea mays AC205562.3_FG002 I 0.814
ORGLA08G0116200 Oryza glaberrima ORGLA08G0116200 I 0.814
ORUFI08G15010 Oryza rufipogon ORUFI08G15010 I 0.814
MLOC_71897 Hordeum vulgare MLOC_71897 I 0.814
OMERI08G11390 Oryza meridionalis OMERI08G11390 I 0.814
BRADI3G34850 Brachypodium distachyon BRADI3G34850 I 0.814
PRUPE_ppa025912mg Prunus persica PRUPE_ppa025912mg I 0.814
Sb07g019400 Sorghum bicolor Sb07g019400 I 0.814
OGLUM07G10380 Oryza glumaepatula OGLUM07G10380 I 0.814
OB09G14040 Oryza brachyantha OB09G14040 I 0.814
PK21971.1 Cannabis sativa PK21971.1 I 0.813
Pavir.J37854 Panicum virgatum Pavir.J37854 I 0.813
gene13108-v1.0-hybrid Fragaria vesca gene13108-v1.0-hybrid I 0.813
GRMZM2G127064 Zea mays GRMZM2G127064 I 0.813
Eucgr.D02359 Eucalyptus grandis Eucgr.D02359 I 0.813
GLYMA06G13090 Glycine max GLYMA06G13090 I 0.813
Pm019783 Prunus mume Pm019783 I 0.813
GLYMA04G41701 Glycine max GLYMA04G41701 I 0.813
Bra016975 Brassica rapa Bra016975 I 0.813
TCM_015346 Theobroma cacao TCM_015346 I 0.813
TCM_006103 Theobroma cacao TCM_006103 I 0.813
PRUPE_ppa007986mg Prunus persica PRUPE_ppa007986mg I 0.813
MDP0000767097 Malus domestica MDP0000767097 I 0.813
GLYMA13G34261 Glycine max GLYMA13G34261 I 0.812
Carubv10023773m.g Capsella rubella Carubv10023773m.g I 0.812
Bo3g035140 Brassica oleracea Bo3g035140 I 0.812
Cagra.1642s0038 Capsella grandiflora Cagra.1642s0038 I 0.812
Bostr.9345s0061 Boechera stricta Bostr.9345s0061 I 0.812
Thhalv10017926m.g Eutrema salsugineum Thhalv10017926m.g I 0.812
WRKY55 Arabidopsis thaliana AT2G40740 D 0.812
WRKY55 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4001817 I 0.812
F775_02122 Aegilops tauschii F775_02122 I 0.812
MTR_7g117200 Medicago truncatula MTR_7g117200 I 0.812
Eucgr.G03144 Eucalyptus grandis Eucgr.G03144 I 0.812
TRIUR3_24602 Triticum urartu TRIUR3_24602 I 0.812
MTR_2g075690 Medicago truncatula MTR_2g075690 I 0.812
gene13554-v1.0-hybrid Fragaria vesca gene13554-v1.0-hybrid I 0.812
Bo4g190380 Brassica oleracea Bo4g190380 I 0.812
GLYMA16G02960 Glycine max GLYMA16G02960 I 0.812
Bra000203 Brassica rapa Bra000203 I 0.812
Aquca_030_00182 Aquilegia coerulea Aquca_030_00182 I 0.811
PRUPE_ppa026704mg Prunus persica PRUPE_ppa026704mg I 0.811
Si015433m.g Setaria italica Si015433m.g I 0.811
Gorai.007G014600 Gossypium raimondii Gorai.007G014600 I 0.811
GLYMA03G41750 Glycine max GLYMA03G41750 I 0.811
mgf009193m Mimulus guttatus mgf009193m I 0.811
Pm003013 Prunus mume Pm003013 I 0.811
PDK_20s1521921g002 Phoenix dactylifera PDK_20s1521921g002 I 0.811
Ca_03952 Cicer arietinum Ca_03952 I 0.811
Bo4g114050 Brassica oleracea Bo4g114050 I 0.811
MTR_2g075680 Medicago truncatula MTR_2g075680 I 0.811
Gorai.012G014000 Gossypium raimondii Gorai.012G014000 I 0.811
cassava43538.valid.m1 Manihot esculenta cassava43538.valid.m1 I 0.811
Bra014693 Brassica rapa Bra014693 I 0.811
MTR_3g090860 Medicago truncatula MTR_3g090860 I 0.811
MLOC_34522 Hordeum vulgare MLOC_34522 N 0.810
MTR_3g093830 Medicago truncatula MTR_3g093830 I 0.810
Lus10029021.g Linum usitatissimum Lus10029021.g I 0.810
AMTR_s00077p00103880 Amborella trichopoda AMTR_s00077p00103880 I 0.810
gene32076-v1.0-hybrid Fragaria vesca gene32076-v1.0-hybrid I 0.810
Al_scaffold_0005_2548 Arabidopsis lyrata Al_scaffold_0005_2548 I 0.810
gene13549-v1.0-hybrid Fragaria vesca gene13549-v1.0-hybrid I 0.810
cassava7525.valid.m1 Manihot esculenta cassava7525.valid.m1 I 0.810
Traes_4DS_FE38A59D0 Triticum aestivum Traes_4DS_FE38A59D0 N 0.810
F775_28648 Aegilops tauschii F775_28648 N 0.810
Ca_12915 Cicer arietinum Ca_12915 I 0.810
Traes_4BS_A6D9EB0E5 Triticum aestivum Traes_4BS_A6D9EB0E5 N 0.810
Traes_4AL_9E0D1CFA6 Triticum aestivum Traes_4AL_9E0D1CFA6 N 0.810
SELMODRAFT_29692 Selaginella moellendorffii SELMODRAFT_29692 I 0.810
Bra020197 Brassica rapa Bra020197 I 0.810
MTR_5g067700 Medicago truncatula MTR_5g067700 I 0.810
cassava7524.valid.m1 Manihot esculenta cassava7524.valid.m1 I 0.810
GRMZM2G063216 Zea mays GRMZM2G063216 N 0.810
SapurV1A.0035s0630 Salix purpurea SapurV1A.0035s0630 I 0.810
GRMZM2G324999 Zea mays GRMZM2G324999 I 0.810
Carubv10017859m.g Capsella rubella Carubv10017859m.g I 0.810
Cagra.0925s0055 Capsella grandiflora Cagra.0925s0055 I 0.810
SELMODRAFT_113487 Selaginella moellendorffii SELMODRAFT_113487 I 0.810
Bo2g024040 Brassica oleracea Bo2g024040 I 0.810
SapurV1A.0190s0060 Salix purpurea SapurV1A.0190s0060 I 0.809
SapurV1A.2295s0010 Salix purpurea SapurV1A.2295s0010 I 0.809
POPTR_0002s17010 Populus trichocarpa POPTR_0002s17010 I 0.809
WRKY67 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000969 I 0.809
Si030531m.g Setaria italica Si030531m.g I 0.809
Bra020196 Brassica rapa Bra020196 I 0.809
WRKY38 Arabidopsis thaliana AT5G22570 D 0.809
WRKY63 Arabidopsis thaliana AT1G66600 D 0.809
TCM_005179 Theobroma cacao TCM_005179 I 0.809
WRKY38 Arabidopsis lyrata scaffold_602308.1 I 0.809
mgf020540m Mimulus guttatus mgf020540m I 0.809
VIT_02s0025g01280 Vitis vinifera VIT_02s0025g01280 I 0.809
evm.TU.contig_32256 Carica papaya evm.TU.contig_32256 I 0.809
WRKY70 Arabidopsis thaliana AT3G56400 D 0.808
AMTR_s00015p00229650 Amborella trichopoda AMTR_s00015p00229650 I 0.808
evm.TU.supercontig_3.53 Carica papaya evm.TU.supercontig_3.53 I 0.808
chr1.CM0320.400.nd Lotus japonicus chr1.CM0320.400.nd I 0.808
Eucgr.K00331 Eucalyptus grandis Eucgr.K00331 I 0.808
Cla021486 Citrullus lanatus Cla021486 I 0.808
Gorai.008G270600 Gossypium raimondii Gorai.008G270600 I 0.808
GLYMA07G06320 Glycine max GLYMA07G06320 I 0.808
WRKY70 Arabidopsis lyrata fgenesh2_kg.5__2072__AT3G56400.1 I 0.808
Bo6g066790 Brassica oleracea Bo6g066790 I 0.808