Lus10014177.g (Linum usitatissimum)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Lus10014177.g T356402_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY55
M07392_2.00 		Arabidopsis thaliana
HWAGTCAACGNH
DNCGTTGACTWD		 Dap-seq
OMalley et al.(2016)
WRKY55_col_a 		0.827 0.600
WRKY70
M07399_2.00 		Arabidopsis thaliana
HAAAGTCAACGNN
NNCGTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY70_col 		0.815 0.533
WRKY53
M01090_2.00 		Arabidopsis thaliana
RGTCAACNN
NNGTTGACY		 PBM
Sullivan et al.(2014)
pTH8245 		0.815 0.567
WRKY30
M02563_2.00 		Arabidopsis thaliana
RGTCAACNNN
NNNGTTGACY		 PBM
Weirauch et al.(2014)
pTH7611 		0.811 0.533
WRKY30
M07422_2.00 		Arabidopsis thaliana
DAAGTCAACGN
NCGTTGACTTH		 Dap-seq
OMalley et al.(2016)
WRKY30_col_a 		0.811 0.533
WRKY30
M07423_2.00 		Arabidopsis thaliana
NNAAGTCAACGNH
DNCGTTGACTTNN		 Dap-seq
OMalley et al.(2016)
WRKY30_colamp_a 		0.811 0.533
WRKY62
M02561_2.00 		Arabidopsis thaliana
TRGTCAAM
KTTGACYA		 PBM
Weirauch et al.(2014)
pTH8246 		0.810 0.533
WRKY38
M00901_2.00 		Arabidopsis thaliana
NNRGTCAACBN
NVGTTGACYNN		 PBM
Franco-Zorrilla et al.(2014)
WRKY38 		0.810 0.567
WRKY63
M02546_2.00 		Arabidopsis thaliana
NGGTCAAN
NTTGACCN		 PBM
Weirauch et al.(2014)
pTH8182 		0.809 0.600
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10014177 WRKY 114 178

Links

Other WRKY family TFs
Other Linum usitatissimum TFs

269 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10022736.g Linum usitatissimum Lus10022736.g I 0.884
Lus10025133.g Linum usitatissimum Lus10025133.g I 0.838
MDP0000828055 Malus domestica MDP0000828055 I 0.833
Eucgr.K01289 Eucalyptus grandis Eucgr.K01289 I 0.832
Cagra.0925s0055 Capsella grandiflora Cagra.0925s0055 I 0.831
Bo4g190380 Brassica oleracea Bo4g190380 I 0.831
Bra000202 Brassica rapa Bra000202 I 0.831
Carubv10017859m.g Capsella rubella Carubv10017859m.g I 0.831
Bo3g035130 Brassica oleracea Bo3g035130 I 0.831
Thhalv10017926m.g Eutrema salsugineum Thhalv10017926m.g I 0.831
MDP0000460139 Malus domestica MDP0000460139 I 0.831
Bra016975 Brassica rapa Bra016975 I 0.830
Al_scaffold_0005_2548 Arabidopsis lyrata Al_scaffold_0005_2548 I 0.830
orange1.1g018407m.g Citrus sinensis orange1.1g018407m.g I 0.830
WRKY55 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4001817 I 0.830
Carubv10023773m.g Capsella rubella Carubv10023773m.g I 0.830
Ciclev10033384m.g Citrus clementina Ciclev10033384m.g I 0.830
Pm019076 Prunus mume Pm019076 I 0.830
Cagra.1642s0038 Capsella grandiflora Cagra.1642s0038 I 0.830
Bostr.9345s0061 Boechera stricta Bostr.9345s0061 I 0.830
PGSC0003DMG400008776 Solanum tuberosum PGSC0003DMG400008776 I 0.829
PRUPE_ppa014826mg Prunus persica PRUPE_ppa014826mg I 0.829
Lus10025216.g Linum usitatissimum Lus10025216.g I 0.829
Gorai.012G014000 Gossypium raimondii Gorai.012G014000 I 0.829
evm.TU.contig_32256 Carica papaya evm.TU.contig_32256 I 0.828
TCM_005179 Theobroma cacao TCM_005179 I 0.828
POPTR_0013s09460 Populus trichocarpa POPTR_0013s09460 I 0.828
WRKY55 Arabidopsis thaliana AT2G40740 D 0.827
cassava8741.m1 Manihot esculenta cassava8741.m1 I 0.827
TCM_045555 Theobroma cacao TCM_045555 I 0.827
TCM_006116 Theobroma cacao TCM_006116 I 0.826
Bo4g114050 Brassica oleracea Bo4g114050 I 0.826
Bo6g066790 Brassica oleracea Bo6g066790 I 0.826
Lus10029022.g Linum usitatissimum Lus10029022.g I 0.826
Eucgr.J00107 Eucalyptus grandis Eucgr.J00107 I 0.826
SELMODRAFT_113487 Selaginella moellendorffii SELMODRAFT_113487 I 0.825
SELMODRAFT_29692 Selaginella moellendorffii SELMODRAFT_29692 I 0.825
Gorai.001G155800 Gossypium raimondii Gorai.001G155800 I 0.825
cassava26362.m1 Manihot esculenta cassava26362.m1 I 0.825
mgf026576m Mimulus guttatus mgf026576m I 0.825
evm.TU.supercontig_19.45 Carica papaya evm.TU.supercontig_19.45 I 0.824
POPTR_0014s09190 Populus trichocarpa POPTR_0014s09190 I 0.824
Carubv10021899m.g Capsella rubella Carubv10021899m.g I 0.824
AMTR_s00077p00103880 Amborella trichopoda AMTR_s00077p00103880 I 0.824
Bra014693 Brassica rapa Bra014693 I 0.824
MTR_7g073380 Medicago truncatula MTR_7g073380 I 0.824
GLYMA19G44380 Glycine max GLYMA19G44380 I 0.824
GSMUA_Achr8G01730_001 Musa acuminata GSMUA_Achr8G01730_001 I 0.823
Bostr.20505s0113 Boechera stricta Bostr.20505s0113 I 0.823
OS01G0820700 Oryza sativa OS01G0820700 I 0.823
29729.m002330 Ricinus communis 29729.m002330 I 0.823
ORUFI01G38660 Oryza rufipogon ORUFI01G38660 I 0.823
WRKY55 Vitis vinifera VIT_13s0067g03130 I 0.823
ORGLA01G0291800 Oryza glaberrima ORGLA01G0291800 I 0.823
BGIOSGA004703 Oryza indica BGIOSGA004703 I 0.823
ONIVA01G40340 Oryza nivara ONIVA01G40340 I 0.823
TCM_006103 Theobroma cacao TCM_006103 I 0.823
Solyc03g095770.2 Solanum lycopersicum Solyc03g095770.2 I 0.822
SapurV1A.0013s0590 Salix purpurea SapurV1A.0013s0590 I 0.822
evm.TU.supercontig_86.65 Carica papaya evm.TU.supercontig_86.65 I 0.822
OB01G44140 Oryza brachyantha OB01G44140 I 0.821
Traes_3DL_48F7A19D2 Triticum aestivum Traes_3DL_48F7A19D2 I 0.821
29729.m002370 Ricinus communis 29729.m002370 I 0.821
GLYMA04G40121 Glycine max GLYMA04G40121 I 0.821
Traes_3AL_2297D6E18 Triticum aestivum Traes_3AL_2297D6E18 I 0.821
SapurV1A.2126s0010 Salix purpurea SapurV1A.2126s0010 I 0.821
Bo4g012750 Brassica oleracea Bo4g012750 I 0.821
F775_23182 Aegilops tauschii F775_23182 I 0.821
BRADI2G53495 Brachypodium distachyon BRADI2G53495 I 0.821
Cucsa.259110 Cucumis sativus Cucsa.259110 I 0.821
mgf020540m Mimulus guttatus mgf020540m I 0.820
Eucgr.K00331 Eucalyptus grandis Eucgr.K00331 I 0.820
evm.TU.supercontig_3.53 Carica papaya evm.TU.supercontig_3.53 I 0.820
evm.TU.supercontig_86.64 Carica papaya evm.TU.supercontig_86.64 I 0.820
PGSC0003DMG400019884 Solanum tuberosum PGSC0003DMG400019884 I 0.820
GLYMA03G00460 Glycine max GLYMA03G00460 I 0.820
GLYMA09G41050 Glycine max GLYMA09G41050 I 0.820
gene21364-v1.0-hybrid Fragaria vesca gene21364-v1.0-hybrid I 0.820
Cucsa.078810 Cucumis sativus Cucsa.078810 I 0.820
OBART01G35310 Oryza barthii OBART01G35310 I 0.820
Cucsa.143840 Cucumis sativus Cucsa.143840 I 0.819
MTR_8g027860 Medicago truncatula MTR_8g027860 I 0.819
Solyc10g009550.2 Solanum lycopersicum Solyc10g009550.2 I 0.819
Traes_6AS_68775100B Triticum aestivum Traes_6AS_68775100B I 0.819
PGSC0003DMG400020608 Solanum tuberosum PGSC0003DMG400020608 I 0.819
GLYMA06G14731 Glycine max GLYMA06G14731 I 0.819
Si028202m.g Setaria italica Si028202m.g I 0.819
PGSC0003DMG400017990 Solanum tuberosum PGSC0003DMG400017990 I 0.819
Aquca_030_00182 Aquilegia coerulea Aquca_030_00182 I 0.819
Cagra.1226s0044 Capsella grandiflora Cagra.1226s0044 I 0.818
Carubv10006884m.g Capsella rubella Carubv10006884m.g I 0.818
MTR_7g073430 Medicago truncatula MTR_7g073430 I 0.818
GLYMA18G44560 Glycine max GLYMA18G44560 I 0.818
Bra004586 Brassica rapa Bra004586 I 0.818
Bra000203 Brassica rapa Bra000203 I 0.818
Bo7g109140 Brassica oleracea Bo7g109140 I 0.818
Bra019265 Brassica rapa Bra019265 I 0.818
WRKY70 Arabidopsis lyrata fgenesh2_kg.5__2072__AT3G56400.1 I 0.818
Bo3g035140 Brassica oleracea Bo3g035140 I 0.818
Eucgr.D02359 Eucalyptus grandis Eucgr.D02359 I 0.818
BGIOSGA019620 Oryza indica BGIOSGA019620 I 0.817
LPERR05G09170 Leersia perrieri LPERR05G09170 I 0.817
OS05G0321900 Oryza sativa OS05G0321900 I 0.817
GLYMA07G06320 Glycine max GLYMA07G06320 I 0.817
OGLUM05G12420 Oryza glumaepatula OGLUM05G12420 I 0.817
BRADI2G30800 Brachypodium distachyon BRADI2G30800 I 0.817
Bra013732 Brassica rapa Bra013732 I 0.817
Si025307m.g Setaria italica Si025307m.g I 0.817
Pavir.Ca01708 Panicum virgatum Pavir.Ca01708 I 0.817
ORUFI05G12690 Oryza rufipogon ORUFI05G12690 I 0.817
OMERI05G10350 Oryza meridionalis OMERI05G10350 I 0.817
OPUNC05G10010 Oryza punctata OPUNC05G10010 I 0.817
ONIVA05G12080 Oryza nivara ONIVA05G12080 I 0.817
OBART05G11690 Oryza barthii OBART05G11690 I 0.817
ORGLA05G0099300 Oryza glaberrima ORGLA05G0099300 I 0.817
Cla015244 Citrullus lanatus Cla015244 I 0.817
OLONG_021880 Oryza longistaminata OLONG_021880 I 0.817
LjT41F16.60.nd Lotus japonicus LjT41F16.60.nd I 0.817
Cla007423 Citrullus lanatus Cla007423 I 0.816
Ca_09495 Cicer arietinum Ca_09495 I 0.816
VIT_16s0050g02510 Vitis vinifera VIT_16s0050g02510 I 0.816
cassava36814.valid.m1 Manihot esculenta cassava36814.valid.m1 I 0.816
cassava43538.valid.m1 Manihot esculenta cassava43538.valid.m1 I 0.816
orange1.1g017895m.g Citrus sinensis orange1.1g017895m.g I 0.816
Thhalv10006146m.g Eutrema salsugineum Thhalv10006146m.g I 0.816
cassava36815.valid.m1 Manihot esculenta cassava36815.valid.m1 I 0.816
Aquca_013_00135 Aquilegia coerulea Aquca_013_00135 I 0.816
GSMUA_Achr9G04830_001 Musa acuminata GSMUA_Achr9G04830_001 I 0.816
GLYMA16G02960 Glycine max GLYMA16G02960 I 0.816
MLOC_3853 Hordeum vulgare MLOC_3853 N 0.816
gene13108-v1.0-hybrid Fragaria vesca gene13108-v1.0-hybrid I 0.816
Ciclev10020744m.g Citrus clementina Ciclev10020744m.g I 0.816
Cucsa.177060 Cucumis sativus Cucsa.177060 I 0.815
GRMZM2G127064 Zea mays GRMZM2G127064 I 0.815
Bo4g190390 Brassica oleracea Bo4g190390 I 0.815
WRKY70 Arabidopsis thaliana AT3G56400 D 0.815
Eucgr.G03145 Eucalyptus grandis Eucgr.G03145 I 0.815
cassava7221.valid.m1 Manihot esculenta cassava7221.valid.m1 I 0.815
F775_23296 Aegilops tauschii F775_23296 N 0.815
Gorai.007G107300 Gossypium raimondii Gorai.007G107300 I 0.815
OMERI01G32480 Oryza meridionalis OMERI01G32480 I 0.815
WRKY53 Arabidopsis lyrata fgenesh2_kg.7__1920__AT4G23810.1 I 0.815
Bostr.7867s0183 Boechera stricta Bostr.7867s0183 I 0.815
WRKY53 Arabidopsis thaliana AT4G23810 D 0.815
Bra016974 Brassica rapa Bra016974 I 0.815
Eucgr.J02653 Eucalyptus grandis Eucgr.J02653 I 0.814
30174.m008651 Ricinus communis 30174.m008651 I 0.814
PK21971.1 Cannabis sativa PK21971.1 I 0.814
MTR_8g005750 Medicago truncatula MTR_8g005750 I 0.814
Thhalv10025724m.g Eutrema salsugineum Thhalv10025724m.g I 0.814
29915.m000479 Ricinus communis 29915.m000479 I 0.814
TRIUR3_24602 Triticum urartu TRIUR3_24602 I 0.814
MTR_7g117200 Medicago truncatula MTR_7g117200 I 0.814
TCM_015346 Theobroma cacao TCM_015346 I 0.814
PGSC0003DMG400029207 Solanum tuberosum PGSC0003DMG400029207 I 0.814
Gorai.010G219200 Gossypium raimondii Gorai.010G219200 I 0.814
Gorai.008G270600 Gossypium raimondii Gorai.008G270600 I 0.814
gene13554-v1.0-hybrid Fragaria vesca gene13554-v1.0-hybrid I 0.814
PGSC0003DMG400027582 Solanum tuberosum PGSC0003DMG400027582 I 0.814
Bostr.20505s0112 Boechera stricta Bostr.20505s0112 I 0.814
Solyc09g015770.2 Solanum lycopersicum Solyc09g015770.2 I 0.814
MDP0000767097 Malus domestica MDP0000767097 I 0.814
Pm019783 Prunus mume Pm019783 I 0.813
orange1.1g020291m.g Citrus sinensis orange1.1g020291m.g I 0.813
Ciclev10012055m.g Citrus clementina Ciclev10012055m.g I 0.813
Gorai.007G014600 Gossypium raimondii Gorai.007G014600 I 0.813
Cagra.1642s0039 Capsella grandiflora Cagra.1642s0039 I 0.813
MDP0000455180 Malus domestica MDP0000455180 I 0.813
MDP0000727570 Malus domestica MDP0000727570 I 0.813
Carubv10024972m.g Capsella rubella Carubv10024972m.g I 0.813
SELMODRAFT_29703 Selaginella moellendorffii SELMODRAFT_29703 I 0.813
PRUPE_ppa007986mg Prunus persica PRUPE_ppa007986mg I 0.813
LPERR05G16160 Leersia perrieri LPERR05G16160 N 0.813
Si002121m.g Setaria italica Si002121m.g I 0.813
POPTR_0019s08730 Populus trichocarpa POPTR_0019s08730 I 0.813
MTR_2g075610 Medicago truncatula MTR_2g075610 I 0.813
OPUNC05G17990 Oryza punctata OPUNC05G17990 N 0.813
MTR_2g075750 Medicago truncatula MTR_2g075750 I 0.813
BRADI2G53510 Brachypodium distachyon BRADI2G53510 I 0.813
SELMODRAFT_29702 Selaginella moellendorffii SELMODRAFT_29702 I 0.813
Bo6g071110 Brassica oleracea Bo6g071110 I 0.813
Bo8g090820 Brassica oleracea Bo8g090820 I 0.813
Bra003239 Brassica rapa Bra003239 I 0.813
Eucgr.G00258 Eucalyptus grandis Eucgr.G00258 I 0.812
Cla021486 Citrullus lanatus Cla021486 I 0.812
OPUNC01G34270 Oryza punctata OPUNC01G34270 N 0.812
ORGLA09G0026100 Oryza glaberrima ORGLA09G0026100 I 0.812
OB05G17240 Oryza brachyantha OB05G17240 I 0.812
GLYMA16G34590 Glycine max GLYMA16G34590 I 0.812
Bostr.13158s0168 Boechera stricta Bostr.13158s0168 I 0.812
GLYMA03G41750 Glycine max GLYMA03G41750 I 0.812
GLYMA06G13090 Glycine max GLYMA06G13090 I 0.812
TRAES3BF081400030CFD_g Triticum aestivum TRAES3BF081400030CFD_g I 0.812
GLYMA04G41701 Glycine max GLYMA04G41701 I 0.812
SapurV1A.0035s0630 Salix purpurea SapurV1A.0035s0630 I 0.811
Eucgr.G03144 Eucalyptus grandis Eucgr.G03144 I 0.811
GLYMA01G43420 Glycine max GLYMA01G43420 I 0.811
WRKY30 Arabidopsis thaliana AT5G24110 D 0.811
Cla018337 Citrullus lanatus Cla018337 I 0.811
WRKY30 Arabidopsis lyrata fgenesh2_kg.6__2402__AT5G24110.1 I 0.811
Gorai.005G003900 Gossypium raimondii Gorai.005G003900 I 0.811
MLOC_71897 Hordeum vulgare MLOC_71897 I 0.811
POPTR_0002s17010 Populus trichocarpa POPTR_0002s17010 I 0.811
LPERR08G11030 Leersia perrieri LPERR08G11030 I 0.811
F775_02122 Aegilops tauschii F775_02122 I 0.811
Bra007243 Brassica rapa Bra007243 I 0.811
GRMZM2G158328 Zea mays GRMZM2G158328 I 0.811
OLONG_007113 Oryza longistaminata OLONG_007113 N 0.810
F775_30853 Aegilops tauschii F775_30853 I 0.810
OMERI05G18240 Oryza meridionalis OMERI05G18240 N 0.810
WRKY38 Arabidopsis thaliana AT5G22570 D 0.810
MLOC_74974 Hordeum vulgare MLOC_74974 I 0.810
Pavir.Ca02643 Panicum virgatum Pavir.Ca02643 I 0.810
BGIOSGA017861 Oryza indica BGIOSGA017861 N 0.810
MLOC_45055 Hordeum vulgare MLOC_45055 I 0.810
gene19219-v1.0-hybrid Fragaria vesca gene19219-v1.0-hybrid I 0.810
Carubv10022120m.g Capsella rubella Carubv10022120m.g I 0.810
TRIUR3_30416 Triticum urartu TRIUR3_30416 I 0.810
WRKY38 Arabidopsis lyrata scaffold_602308.1 I 0.810
Bostr.10199s0022 Boechera stricta Bostr.10199s0022 I 0.810
Solyc08g082110.2 Solanum lycopersicum Solyc08g082110.2 I 0.810
Traes_5DL_C93641E43 Triticum aestivum Traes_5DL_C93641E43 I 0.810
cassava43790.valid.m1 Manihot esculenta cassava43790.valid.m1 I 0.810
Traes_5BL_0A3D332A8 Triticum aestivum Traes_5BL_0A3D332A8 I 0.810
WRKY62 Arabidopsis lyrata Al_scaffold_0006_13 I 0.810
Sb03g038200 Sorghum bicolor Sb03g038200 N 0.810
ORUFI05G21590 Oryza rufipogon ORUFI05G21590 N 0.810
WRKY62 Arabidopsis thaliana AT5G01900 D 0.810
OS05G0478700 Oryza sativa OS05G0478700 N 0.810
Ca_05815 Cicer arietinum Ca_05815 I 0.810
PGSC0003DMG400012160 Solanum tuberosum PGSC0003DMG400012160 I 0.810
VIT_15s0046g01140 Vitis vinifera VIT_15s0046g01140 I 0.810
F775_25840 Aegilops tauschii F775_25840 I 0.809
BRADI4G44360 Brachypodium distachyon BRADI4G44360 I 0.809
Pavir.Eb03562 Panicum virgatum Pavir.Eb03562 I 0.809
Traes_2BS_B65714572 Triticum aestivum Traes_2BS_B65714572 I 0.809
Bo7g097170 Brassica oleracea Bo7g097170 I 0.809
30169.m006533 Ricinus communis 30169.m006533 I 0.809
MDP0000754989 Malus domestica MDP0000754989 I 0.809
Bra009734 Brassica rapa Bra009734 I 0.809
AMTR_s00015p00229650 Amborella trichopoda AMTR_s00015p00229650 I 0.809
Cagra.0086s0001 Capsella grandiflora Cagra.0086s0001 I 0.809
POPTR_0006s10950 Populus trichocarpa POPTR_0006s10950 I 0.809
Cagra.0925s0056 Capsella grandiflora Cagra.0925s0056 I 0.809
Carubv10001559m.g Capsella rubella Carubv10001559m.g I 0.809
Carubv10017349m.g Capsella rubella Carubv10017349m.g I 0.809
GRMZM2G324999 Zea mays GRMZM2G324999 I 0.809
Ca_21669 Cicer arietinum Ca_21669 I 0.809
ONIVA09G03360 Oryza nivara ONIVA09G03360 I 0.809
LjSGA_021425.1 Lotus japonicus LjSGA_021425.1 I 0.809
BGIOSGA030113 Oryza indica BGIOSGA030113 I 0.809
WRKY64 Arabidopsis thaliana AT1G66560 I 0.809
WRKY63 Arabidopsis thaliana AT1G66600 D 0.809
Traes_2AS_6269D889E Triticum aestivum Traes_2AS_6269D889E I 0.809
AMTR_s00015p00228580 Amborella trichopoda AMTR_s00015p00228580 I 0.808
Thhalv10004616m.g Eutrema salsugineum Thhalv10004616m.g I 0.808
MTR_5g067700 Medicago truncatula MTR_5g067700 I 0.808
TCM_019689 Theobroma cacao TCM_019689 I 0.808
Solyc08g008280.2 Solanum lycopersicum Solyc08g008280.2 I 0.808
cassava7525.valid.m1 Manihot esculenta cassava7525.valid.m1 I 0.808
cassava7524.valid.m1 Manihot esculenta cassava7524.valid.m1 I 0.808
VIT_02s0025g01280 Vitis vinifera VIT_02s0025g01280 I 0.808
Solyc06g048870.1 Solanum lycopersicum Solyc06g048870.1 I 0.808
Solyc01g095630.2 Solanum lycopersicum Solyc01g095630.2 I 0.808
Bra008459 Brassica rapa Bra008459 I 0.808
LPERR10G04210 Leersia perrieri LPERR10G04210 I 0.808
PGSC0003DMG400000211 Solanum tuberosum PGSC0003DMG400000211 I 0.808
PGSC0003DMG400005835 Solanum tuberosum PGSC0003DMG400005835 I 0.808
Bo2g095820 Brassica oleracea Bo2g095820 I 0.808