Ciclev10012055m.g (Citrus clementina)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Ciclev10012055m.g T356024_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY70
M07399_2.00 		Arabidopsis thaliana
HAAAGTCAACGNN
NNCGTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY70_col 		0.835 0.627
WRKY55
M07392_2.00 		Arabidopsis thaliana
HWAGTCAACGNH
DNCGTTGACTWD		 Dap-seq
OMalley et al.(2016)
WRKY55_col_a 		0.808 0.610
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10012055m WRKY 169 229

Links

Other WRKY family TFs
Other Citrus clementina TFs

186 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
orange1.1g020291m.g Citrus sinensis orange1.1g020291m.g I 0.894
cassava25180.valid.m1 Manihot esculenta cassava25180.valid.m1 I 0.879
cassava36286.valid.m1 Manihot esculenta cassava36286.valid.m1 I 0.876
POPTR_0016s14490 Populus trichocarpa POPTR_0016s14490 I 0.872
29915.m000479 Ricinus communis 29915.m000479 I 0.872
SapurV1A.0065s0580 Salix purpurea SapurV1A.0065s0580 I 0.868
POPTR_0006s10950 Populus trichocarpa POPTR_0006s10950 I 0.864
Pm003015 Prunus mume Pm003015 I 0.861
Pm003013 Prunus mume Pm003013 I 0.859
SapurV1A.0914s0120 Salix purpurea SapurV1A.0914s0120 I 0.859
SapurV1A.0356s0010 Salix purpurea SapurV1A.0356s0010 I 0.859
PRUPE_ppa026704mg Prunus persica PRUPE_ppa026704mg I 0.859
mgf009193m Mimulus guttatus mgf009193m I 0.858
GLYMA09G41050 Glycine max GLYMA09G41050 I 0.857
PK03324.1 Cannabis sativa PK03324.1 I 0.857
PGSC0003DMG400008391 Solanum tuberosum PGSC0003DMG400008391 I 0.857
TCM_019689 Theobroma cacao TCM_019689 I 0.856
PRUPE_ppa025912mg Prunus persica PRUPE_ppa025912mg I 0.855
Cla018337 Citrullus lanatus Cla018337 I 0.855
GLYMA18G44560 Glycine max GLYMA18G44560 I 0.851
cassava43790.valid.m1 Manihot esculenta cassava43790.valid.m1 I 0.850
Cucsa.177060 Cucumis sativus Cucsa.177060 I 0.849
Ca_09495 Cicer arietinum Ca_09495 I 0.845
gene13547-v1.0-hybrid Fragaria vesca gene13547-v1.0-hybrid I 0.845
Eucgr.K01289 Eucalyptus grandis Eucgr.K01289 I 0.845
PGSC0003DMG400029207 Solanum tuberosum PGSC0003DMG400029207 I 0.844
Solyc09g015770.2 Solanum lycopersicum Solyc09g015770.2 I 0.844
PGSC0003DMG400027582 Solanum tuberosum PGSC0003DMG400027582 I 0.844
gene13546-v1.0-hybrid Fragaria vesca gene13546-v1.0-hybrid I 0.843
gene13549-v1.0-hybrid Fragaria vesca gene13549-v1.0-hybrid I 0.841
MTR_7g073380 Medicago truncatula MTR_7g073380 I 0.839
gene13554-v1.0-hybrid Fragaria vesca gene13554-v1.0-hybrid I 0.839
Ca_18932 Cicer arietinum Ca_18932 I 0.837
MDP0000175240 Malus domestica MDP0000175240 I 0.835
WRKY70 Arabidopsis thaliana AT3G56400 D 0.835
Carubv10017349m.g Capsella rubella Carubv10017349m.g I 0.835
Bo8g090820 Brassica oleracea Bo8g090820 I 0.835
29729.m002369 Ricinus communis 29729.m002369 I 0.835
MTR_2g075690 Medicago truncatula MTR_2g075690 I 0.834
mgf002542m Mimulus guttatus mgf002542m I 0.834
GLYMA06G14720 Glycine max GLYMA06G14720 I 0.834
PRUPE_ppa020736mg Prunus persica PRUPE_ppa020736mg I 0.834
Pm003014 Prunus mume Pm003014 I 0.834
VIT_08s0058g01390 Vitis vinifera VIT_08s0058g01390 I 0.834
GLYMA16G34590 Glycine max GLYMA16G34590 I 0.834
Bra007243 Brassica rapa Bra007243 I 0.833
Thhalv10006146m.g Eutrema salsugineum Thhalv10006146m.g I 0.833
GLYMA04G40130 Glycine max GLYMA04G40130 I 0.833
Gorai.005G003900 Gossypium raimondii Gorai.005G003900 I 0.833
evm.TU.supercontig_19.44 Carica papaya evm.TU.supercontig_19.44 I 0.832
Lus10025133.g Linum usitatissimum Lus10025133.g I 0.832
Bo6g071110 Brassica oleracea Bo6g071110 I 0.832
WRKY70 Arabidopsis lyrata fgenesh2_kg.5__2072__AT3G56400.1 I 0.832
MTR_2g075680 Medicago truncatula MTR_2g075680 I 0.831
MTR_8g005750 Medicago truncatula MTR_8g005750 I 0.831
Cagra.0925s0056 Capsella grandiflora Cagra.0925s0056 I 0.831
MTR_7g073430 Medicago truncatula MTR_7g073430 I 0.830
MDP0000754989 Malus domestica MDP0000754989 I 0.830
Eucgr.J00106 Eucalyptus grandis Eucgr.J00106 I 0.830
Bostr.20505s0112 Boechera stricta Bostr.20505s0112 I 0.829
GLYMA13G34240 Glycine max GLYMA13G34240 I 0.829
Aquca_027_00037 Aquilegia coerulea Aquca_027_00037 I 0.829
cassava23183.valid.m1 Manihot esculenta cassava23183.valid.m1 I 0.827
Bra003239 Brassica rapa Bra003239 I 0.827
evm.TU.supercontig_86.64 Carica papaya evm.TU.supercontig_86.64 I 0.827
GLYMA03G00460 Glycine max GLYMA03G00460 I 0.827
GLYMA13G34281 Glycine max GLYMA13G34281 I 0.826
Lus10025216.g Linum usitatissimum Lus10025216.g I 0.825
cassava7525.valid.m1 Manihot esculenta cassava7525.valid.m1 I 0.825
PK21378.1 Cannabis sativa PK21378.1 I 0.825
Cla007424 Citrullus lanatus Cla007424 I 0.825
evm.TU.supercontig_86.65 Carica papaya evm.TU.supercontig_86.65 I 0.825
cassava7524.valid.m1 Manihot esculenta cassava7524.valid.m1 I 0.825
SapurV1A.0190s0060 Salix purpurea SapurV1A.0190s0060 I 0.824
Cucsa.078810 Cucumis sativus Cucsa.078810 I 0.824
SapurV1A.2295s0010 Salix purpurea SapurV1A.2295s0010 I 0.824
Pm019286 Prunus mume Pm019286 I 0.823
Bra014692 Brassica rapa Bra014692 I 0.823
Bo00913s010 Brassica oleracea Bo00913s010 I 0.823
POPTR_0013s09470 Populus trichocarpa POPTR_0013s09470 I 0.823
Cla015244 Citrullus lanatus Cla015244 I 0.822
MTR_3g093830 Medicago truncatula MTR_3g093830 I 0.822
Gorai.013G008300 Gossypium raimondii Gorai.013G008300 I 0.822
AMTR_s00077p00103880 Amborella trichopoda AMTR_s00077p00103880 I 0.822
Lus10012870.g Linum usitatissimum Lus10012870.g I 0.821
chr1.CM0320.400.nd Lotus japonicus chr1.CM0320.400.nd I 0.821
Ca_12915 Cicer arietinum Ca_12915 I 0.821
PRUPE_ppa026125mg Prunus persica PRUPE_ppa026125mg I 0.821
Si012735m.g Setaria italica Si012735m.g I 0.820
Lus10029021.g Linum usitatissimum Lus10029021.g I 0.820
Lus10030517.g Linum usitatissimum Lus10030517.g I 0.820
Lus10034244.g Linum usitatissimum Lus10034244.g I 0.819
Ca_04100 Cicer arietinum Ca_04100 I 0.819
orange1.1g021598m.g Citrus sinensis orange1.1g021598m.g I 0.818
MTR_2g075610 Medicago truncatula MTR_2g075610 I 0.818
Ciclev10032192m.g Citrus clementina Ciclev10032192m.g I 0.818
MTR_2g075750 Medicago truncatula MTR_2g075750 I 0.818
POPTR_0002s17010 Populus trichocarpa POPTR_0002s17010 I 0.818
TCM_045556 Theobroma cacao TCM_045556 I 0.818
GSMUA_Achr8G01730_001 Musa acuminata GSMUA_Achr8G01730_001 I 0.817
Eucgr.G03145 Eucalyptus grandis Eucgr.G03145 I 0.817
Bo4g190390 Brassica oleracea Bo4g190390 I 0.817
GLYMA14G36430 Glycine max GLYMA14G36430 I 0.817
Bra016974 Brassica rapa Bra016974 I 0.817
TCM_006103 Theobroma cacao TCM_006103 I 0.816
VIT_13s0067g03140 Vitis vinifera VIT_13s0067g03140 I 0.816
PDK_20s1519811g002 Phoenix dactylifera PDK_20s1519811g002 I 0.816
GLYMA05G29921 Glycine max GLYMA05G29921 I 0.816
Carubv10024972m.g Capsella rubella Carubv10024972m.g I 0.815
Cagra.1642s0039 Capsella grandiflora Cagra.1642s0039 I 0.815
Lus10029022.g Linum usitatissimum Lus10029022.g I 0.815
VIT_15s0046g01140 Vitis vinifera VIT_15s0046g01140 I 0.815
LPERR03G14340 Leersia perrieri LPERR03G14340 I 0.814
Gorai.001G155800 Gossypium raimondii Gorai.001G155800 I 0.814
GLYMA13G34251 Glycine max GLYMA13G34251 I 0.814
MTR_8g027860 Medicago truncatula MTR_8g027860 I 0.814
Gorai.009G292600 Gossypium raimondii Gorai.009G292600 I 0.813
Lus10014177.g Linum usitatissimum Lus10014177.g I 0.813
MTR_0002s1250 Medicago truncatula MTR_0002s1250 I 0.813
Bo4g012750 Brassica oleracea Bo4g012750 I 0.813
gene21365-v1.0-hybrid Fragaria vesca gene21365-v1.0-hybrid I 0.813
PDK_20s1571901g001 Phoenix dactylifera PDK_20s1571901g001 I 0.812
Solyc05g050330.2 Solanum lycopersicum Solyc05g050330.2 I 0.812
Gorai.010G219200 Gossypium raimondii Gorai.010G219200 I 0.812
PGSC0003DMG400020608 Solanum tuberosum PGSC0003DMG400020608 I 0.812
GLYMA14G36438 Glycine max GLYMA14G36438 I 0.812
Aquca_030_00182 Aquilegia coerulea Aquca_030_00182 I 0.812
Gorai.007G107300 Gossypium raimondii Gorai.007G107300 I 0.812
Ciclev10033384m.g Citrus clementina Ciclev10033384m.g I 0.811
Bra004586 Brassica rapa Bra004586 I 0.811
30169.m006533 Ricinus communis 30169.m006533 I 0.811
Bo3g035140 Brassica oleracea Bo3g035140 I 0.811
SapurV1A.1043s0030 Salix purpurea SapurV1A.1043s0030 I 0.811
SELMODRAFT_113487 Selaginella moellendorffii SELMODRAFT_113487 I 0.811
SELMODRAFT_29692 Selaginella moellendorffii SELMODRAFT_29692 I 0.811
TCM_006116 Theobroma cacao TCM_006116 I 0.811
Solyc03g095770.2 Solanum lycopersicum Solyc03g095770.2 I 0.811
Si030531m.g Setaria italica Si030531m.g I 0.811
POPTR_0012s01380 Populus trichocarpa POPTR_0012s01380 I 0.811
cassava36814.valid.m1 Manihot esculenta cassava36814.valid.m1 I 0.811
GLYMA19G44380 Glycine max GLYMA19G44380 I 0.811
orange1.1g018407m.g Citrus sinensis orange1.1g018407m.g I 0.811
BRADI4G44370 Brachypodium distachyon BRADI4G44370 N 0.811
Bra000203 Brassica rapa Bra000203 I 0.811
cassava36815.valid.m1 Manihot esculenta cassava36815.valid.m1 I 0.811
SapurV1A.0377s0020 Salix purpurea SapurV1A.0377s0020 I 0.811
cassava7221.valid.m1 Manihot esculenta cassava7221.valid.m1 I 0.811
Bra016975 Brassica rapa Bra016975 I 0.810
Pavir.Gb01556 Panicum virgatum Pavir.Gb01556 I 0.810
evm.TU.contig_32256 Carica papaya evm.TU.contig_32256 I 0.810
MTR_8g032510 Medicago truncatula MTR_8g032510 N 0.810
Aquca_013_00135 Aquilegia coerulea Aquca_013_00135 I 0.810
Bostr.9345s0060 Boechera stricta Bostr.9345s0060 I 0.810
POPTR_0014s09190 Populus trichocarpa POPTR_0014s09190 I 0.810
Eucgr.D02359 Eucalyptus grandis Eucgr.D02359 I 0.810
TCM_005179 Theobroma cacao TCM_005179 I 0.810
GSMUA_Achr6G05710_001 Musa acuminata GSMUA_Achr6G05710_001 I 0.810
Bra000202 Brassica rapa Bra000202 I 0.809
Bo3g035130 Brassica oleracea Bo3g035130 I 0.809
GRMZM2G025895 Zea mays GRMZM2G025895 I 0.809
MDP0000828055 Malus domestica MDP0000828055 I 0.809
30174.m008651 Ricinus communis 30174.m008651 I 0.809
Sb08g005080 Sorghum bicolor Sb08g005080 I 0.809
Bostr.9345s0061 Boechera stricta Bostr.9345s0061 I 0.809
Carubv10023773m.g Capsella rubella Carubv10023773m.g I 0.809
Cagra.1642s0038 Capsella grandiflora Cagra.1642s0038 I 0.809
WRKY55 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4001817 I 0.809
GRMZM2G061408 Zea mays GRMZM2G061408 I 0.809
Bo4g190380 Brassica oleracea Bo4g190380 I 0.808
Si022702m.g Setaria italica Si022702m.g I 0.808
Thhalv10017926m.g Eutrema salsugineum Thhalv10017926m.g I 0.808
OS03G0335200 Oryza sativa OS03G0335200 I 0.808
BGIOSGA012571 Oryza indica BGIOSGA012571 I 0.808
WRKY55 Arabidopsis thaliana AT2G40740 D 0.808
OLONG_024544 Oryza longistaminata OLONG_024544 I 0.808
OBART03G16400 Oryza barthii OBART03G16400 I 0.808
Eucgr.G03144 Eucalyptus grandis Eucgr.G03144 I 0.808
GSMUA_Achr8G25110_001 Musa acuminata GSMUA_Achr8G25110_001 I 0.808
GLYMA14G36446 Glycine max GLYMA14G36446 I 0.808
OGLUM03G16780 Oryza glumaepatula OGLUM03G16780 I 0.808
Pavir.Cb01173 Panicum virgatum Pavir.Cb01173 I 0.808
ONIVA03G17390 Oryza nivara ONIVA03G17390 I 0.808
Pavir.J05812 Panicum virgatum Pavir.J05812 I 0.808
Pavir.Ib01568 Panicum virgatum Pavir.Ib01568 I 0.808
OMERI03G14670 Oryza meridionalis OMERI03G14670 I 0.808
ORUFI03G16960 Oryza rufipogon ORUFI03G16960 I 0.808