CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J31578
(
Panicum virgatum
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03106 (WRKY)
IPR003657
Pavir.J31578
T356854_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J31578.1.p
WRKY
43
104
DDGHQWRKYGEKKLSNSNFPRFYYRCTYKNDMKCPATKQVQQKDTTDPPLFSVTYFNHHTCI
Links
Other
WRKY
family TFs
Other
Panicum virgatum
TFs
154 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Si026831m.g
Setaria italica
Si026831m.g
N
0.895
Si011007m.g
Setaria italica
Si011007m.g
N
0.895
OS11G0116900
Oryza sativa
OS11G0116900
N
0.894
ORUFI12G01160
Oryza rufipogon
ORUFI12G01160
N
0.894
BRADI4G25717
Brachypodium distachyon
BRADI4G25717
N
0.894
ORUFI11G01040
Oryza rufipogon
ORUFI11G01040
N
0.894
ORGLA11G0201700
Oryza glaberrima
ORGLA11G0201700
N
0.894
LPERR12G01060
Leersia perrieri
LPERR12G01060
N
0.894
ORGLA12G0007300
Oryza glaberrima
ORGLA12G0007300
N
0.894
LPERR11G00950
Leersia perrieri
LPERR11G00950
N
0.894
OPUNC12G00960
Oryza punctata
OPUNC12G00960
N
0.894
BGIOSGA034615
Oryza indica
BGIOSGA034615
N
0.894
ONIVA11G01030
Oryza nivara
ONIVA11G01030
N
0.894
OBART12G00820
Oryza barthii
OBART12G00820
N
0.894
OGLUM12G01270
Oryza glumaepatula
OGLUM12G01270
N
0.894
OB12G11010
Oryza brachyantha
OB12G11010
N
0.894
OBART11G01090
Oryza barthii
OBART11G01090
N
0.894
OPUNC11G00940
Oryza punctata
OPUNC11G00940
N
0.894
BGIOSGA036759
Oryza indica
BGIOSGA036759
N
0.894
OS12G0116400
Oryza sativa
OS12G0116400
N
0.894
OB11G10740
Oryza brachyantha
OB11G10740
N
0.890
MLOC_34522
Hordeum vulgare
MLOC_34522
N
0.883
Traes_4AL_9E0D1CFA6
Triticum aestivum
Traes_4AL_9E0D1CFA6
N
0.883
Traes_4DS_FE38A59D0
Triticum aestivum
Traes_4DS_FE38A59D0
N
0.883
F775_28648
Aegilops tauschii
F775_28648
N
0.883
GRMZM2G063216
Zea mays
GRMZM2G063216
N
0.883
Traes_4BS_A6D9EB0E5
Triticum aestivum
Traes_4BS_A6D9EB0E5
N
0.883
Sb08g002590
Sorghum bicolor
Sb08g002590
N
0.870
Sb01g036870
Sorghum bicolor
Sb01g036870
N
0.853
Si039519m.g
Setaria italica
Si039519m.g
N
0.853
Pavir.Ib01500
Panicum virgatum
Pavir.Ib01500
N
0.853
ORUFI03G16080
Oryza rufipogon
ORUFI03G16080
N
0.852
ORGLA03G0148400
Oryza glaberrima
ORGLA03G0148400
N
0.852
OB03G25300
Oryza brachyantha
OB03G25300
N
0.852
LPERR03G13630
Leersia perrieri
LPERR03G13630
N
0.852
OPUNC03G15030
Oryza punctata
OPUNC03G15030
N
0.852
OBART03G15470
Oryza barthii
OBART03G15470
N
0.852
ONIVA03G16490
Oryza nivara
ONIVA03G16490
N
0.852
GRMZM2G030272
Zea mays
GRMZM2G030272
N
0.852
BGIOSGA012523
Oryza indica
BGIOSGA012523
N
0.852
OLONG_001744
Oryza longistaminata
OLONG_001744
N
0.852
OGLUM03G15660
Oryza glumaepatula
OGLUM03G15660
N
0.852
OS03G0321700
Oryza sativa
OS03G0321700
N
0.852
BGIOSGA012525
Oryza indica
BGIOSGA012525
N
0.852
Traes_4AS_70DF607CC
Triticum aestivum
Traes_4AS_70DF607CC
N
0.850
TRIUR3_06231
Triticum urartu
TRIUR3_06231
N
0.850
Traes_4BL_A8C6FBEB6
Triticum aestivum
Traes_4BL_A8C6FBEB6
N
0.850
BRADI1G63910
Brachypodium distachyon
BRADI1G63910
N
0.850
F775_31089
Aegilops tauschii
F775_31089
N
0.850
Traes_4DL_3140A8240
Triticum aestivum
Traes_4DL_3140A8240
N
0.850
MLOC_57764
Hordeum vulgare
MLOC_57764
N
0.850
LPERR10G04210
Leersia perrieri
LPERR10G04210
I
0.840
OLONG_022888
Oryza longistaminata
OLONG_022888
N
0.839
OMERI10G04260
Oryza meridionalis
OMERI10G04260
N
0.838
ORGLA10G0049300
Oryza glaberrima
ORGLA10G0049300
N
0.838
OPUNC10G05310
Oryza punctata
OPUNC10G05310
N
0.838
OBART10G05920
Oryza barthii
OBART10G05920
N
0.838
PDK_20s1519811g002
Phoenix dactylifera
PDK_20s1519811g002
I
0.834
Pavir.Ia03459
Panicum virgatum
Pavir.Ia03459
N
0.833
GRMZM2G060918
Zea mays
GRMZM2G060918
N
0.832
OBART11G01070
Oryza barthii
OBART11G01070
N
0.827
ORGLA11G0201600
Oryza glaberrima
ORGLA11G0201600
N
0.827
Pavir.Gb02382
Panicum virgatum
Pavir.Gb02382
N
0.824
MLOC_57051
Hordeum vulgare
MLOC_57051
I
0.824
OGLUM05G21430
Oryza glumaepatula
OGLUM05G21430
N
0.823
MTR_7g073430
Medicago truncatula
MTR_7g073430
I
0.823
BRADI2G22230
Brachypodium distachyon
BRADI2G22230
I
0.823
MTR_7g073380
Medicago truncatula
MTR_7g073380
I
0.822
Traes_1BL_B4AFDB663
Triticum aestivum
Traes_1BL_B4AFDB663
I
0.821
F775_31341
Aegilops tauschii
F775_31341
I
0.821
TRIUR3_34396
Triticum urartu
TRIUR3_34396
I
0.821
Traes_1AL_B24F28600
Triticum aestivum
Traes_1AL_B24F28600
I
0.821
Traes_1DL_DFE1721E0
Triticum aestivum
Traes_1DL_DFE1721E0
N
0.820
F775_02926
Aegilops tauschii
F775_02926
N
0.820
Traes_1AL_309623B48
Triticum aestivum
Traes_1AL_309623B48
N
0.820
Traes_1BL_46340D685
Triticum aestivum
Traes_1BL_46340D685
N
0.820
TRIUR3_22129
Triticum urartu
TRIUR3_22129
N
0.820
ORUFI11G01010
Oryza rufipogon
ORUFI11G01010
N
0.819
OGLUM12G01250
Oryza glumaepatula
OGLUM12G01250
N
0.819
Lus10025216.g
Linum usitatissimum
Lus10025216.g
I
0.819
BGIOSGA034616
Oryza indica
BGIOSGA034616
N
0.819
ONIVA11G01010
Oryza nivara
ONIVA11G01010
N
0.819
Pavir.Ga02545
Panicum virgatum
Pavir.Ga02545
N
0.819
OPUNC12G00950
Oryza punctata
OPUNC12G00950
N
0.818
Pavir.J38024
Panicum virgatum
Pavir.J38024
N
0.817
OPUNC11G00930
Oryza punctata
OPUNC11G00930
N
0.817
Pavir.J37617
Panicum virgatum
Pavir.J37617
N
0.817
Si005138m.g
Setaria italica
Si005138m.g
N
0.817
MTR_2g075700
Medicago truncatula
MTR_2g075700
I
0.817
Sb03g038180
Sorghum bicolor
Sb03g038180
I
0.817
GRMZM2G065290
Zea mays
GRMZM2G065290
I
0.816
MLOC_11088
Hordeum vulgare
MLOC_11088
N
0.816
ORGLA12G0007100
Oryza glaberrima
ORGLA12G0007100
N
0.815
BRADI2G53495
Brachypodium distachyon
BRADI2G53495
I
0.815
OBART05G20320
Oryza barthii
OBART05G20320
N
0.815
ONIVA12G00800
Oryza nivara
ONIVA12G00800
N
0.815
OBART12G00800
Oryza barthii
OBART12G00800
N
0.815
OMERI12G00120
Oryza meridionalis
OMERI12G00120
N
0.815
OLONG_028722
Oryza longistaminata
OLONG_028722
N
0.815
ORGLA05G0177300
Oryza glaberrima
ORGLA05G0177300
N
0.815
BGIOSGA036760
Oryza indica
BGIOSGA036760
N
0.815
OGLUM12G01320
Oryza glumaepatula
OGLUM12G01320
N
0.815
OPUNC05G18030
Oryza punctata
OPUNC05G18030
I
0.815
ORUFI12G01140
Oryza rufipogon
ORUFI12G01140
N
0.815
BGIOSGA004703
Oryza indica
BGIOSGA004703
I
0.814
OS01G0820700
Oryza sativa
OS01G0820700
I
0.814
OB05G27850
Oryza brachyantha
OB05G27850
I
0.814
F775_23182
Aegilops tauschii
F775_23182
I
0.814
Ca_09495
Cicer arietinum
Ca_09495
I
0.814
ONIVA01G40340
Oryza nivara
ONIVA01G40340
I
0.814
OB01G44140
Oryza brachyantha
OB01G44140
I
0.814
ORGLA01G0291800
Oryza glaberrima
ORGLA01G0291800
I
0.814
ORUFI01G38660
Oryza rufipogon
ORUFI01G38660
I
0.814
Traes_3DL_48F7A19D2
Triticum aestivum
Traes_3DL_48F7A19D2
I
0.814
Traes_3AL_2297D6E18
Triticum aestivum
Traes_3AL_2297D6E18
I
0.814
OMERI11G01480
Oryza meridionalis
OMERI11G01480
N
0.813
BGIOSGA032700
Oryza indica
BGIOSGA032700
N
0.813
OPUNC05G18000
Oryza punctata
OPUNC05G18000
I
0.813
ONIVA10G05410
Oryza nivara
ONIVA10G05410
N
0.813
OGLUM12G01380
Oryza glumaepatula
OGLUM12G01380
N
0.812
OGLUM01G39380
Oryza glumaepatula
OGLUM01G39380
N
0.812
OBART05G20330
Oryza barthii
OBART05G20330
I
0.812
MTR_2g075750
Medicago truncatula
MTR_2g075750
I
0.812
MTR_2g075610
Medicago truncatula
MTR_2g075610
I
0.812
ONIVA01G40380
Oryza nivara
ONIVA01G40380
N
0.812
BGIOSGA000583
Oryza indica
BGIOSGA000583
N
0.812
ORGLA05G0177400
Oryza glaberrima
ORGLA05G0177400
I
0.812
ORGLA01G0292000
Oryza glaberrima
ORGLA01G0292000
N
0.812
OPUNC01G34290
Oryza punctata
OPUNC01G34290
N
0.812
ORUFI01G38680
Oryza rufipogon
ORUFI01G38680
N
0.812
ONIVA05G21450
Oryza nivara
ONIVA05G21450
N
0.811
LPERR05G16170
Leersia perrieri
LPERR05G16170
I
0.811
OB11G10730
Oryza brachyantha
OB11G10730
N
0.811
OMERI01G32500
Oryza meridionalis
OMERI01G32500
N
0.811
OGLUM05G21510
Oryza glumaepatula
OGLUM05G21510
I
0.811
Pavir.J16737
Panicum virgatum
Pavir.J16737
N
0.810
LPERR11G00940
Leersia perrieri
LPERR11G00940
N
0.810
LPERR05G16160
Leersia perrieri
LPERR05G16160
N
0.810
Pavir.Ca00178
Panicum virgatum
Pavir.Ca00178
N
0.809
BGIOSGA036756
Oryza indica
BGIOSGA036756
N
0.809
OS12G0116700
Oryza sativa
OS12G0116700
N
0.809
Pavir.Hb02025
Panicum virgatum
Pavir.Hb02025
N
0.809
Bo4g012750
Brassica oleracea
Bo4g012750
I
0.809
Si025181m.g
Setaria italica
Si025181m.g
I
0.809
TRIUR3_14306
Triticum urartu
TRIUR3_14306
I
0.809
OBART12G00850
Oryza barthii
OBART12G00850
N
0.809
ORGLA12G0007600
Oryza glaberrima
ORGLA12G0007600
N
0.809
ORUFI10G06270
Oryza rufipogon
ORUFI10G06270
N
0.809
Eucgr.D02359
Eucalyptus grandis
Eucgr.D02359
I
0.808
OS11G0117500
Oryza sativa
OS11G0117500
N
0.808
OMERI11G01570
Oryza meridionalis
OMERI11G01570
N
0.808
Ca_12915
Cicer arietinum
Ca_12915
I
0.808
OB12G11030
Oryza brachyantha
OB12G11030
N
0.808
OB11G10760
Oryza brachyantha
OB11G10760
N
0.808