Pavir.Ga02545 (Panicum virgatum)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Pavir.Ga02545 T356775_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ga02545.1.p WRKY 126 187

Links

Other WRKY family TFs
Other Panicum virgatum TFs

164 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Hb02025 Panicum virgatum Pavir.Hb02025 N 0.888
Pavir.Ca00178 Panicum virgatum Pavir.Ca00178 N 0.886
OPUNC11G00930 Oryza punctata OPUNC11G00930 N 0.877
OPUNC12G00950 Oryza punctata OPUNC12G00950 N 0.875
LPERR11G00940 Leersia perrieri LPERR11G00940 N 0.872
OMERI11G01480 Oryza meridionalis OMERI11G01480 N 0.871
Sb05g001170 Sorghum bicolor Sb05g001170 N 0.871
OB11G10730 Oryza brachyantha OB11G10730 N 0.869
OGLUM12G01250 Oryza glumaepatula OGLUM12G01250 N 0.869
BGIOSGA034616 Oryza indica BGIOSGA034616 N 0.869
ONIVA11G01010 Oryza nivara ONIVA11G01010 N 0.869
Si026670m.g Setaria italica Si026670m.g N 0.869
ORUFI11G01010 Oryza rufipogon ORUFI11G01010 N 0.869
Si010706m.g Setaria italica Si010706m.g N 0.868
OLONG_028722 Oryza longistaminata OLONG_028722 N 0.865
ORUFI12G01140 Oryza rufipogon ORUFI12G01140 N 0.865
BGIOSGA036760 Oryza indica BGIOSGA036760 N 0.865
ONIVA12G00800 Oryza nivara ONIVA12G00800 N 0.865
OBART12G00800 Oryza barthii OBART12G00800 N 0.865
OMERI12G00120 Oryza meridionalis OMERI12G00120 N 0.865
OGLUM12G01320 Oryza glumaepatula OGLUM12G01320 N 0.865
ORGLA12G0007100 Oryza glaberrima ORGLA12G0007100 N 0.865
GRMZM2G099593 Zea mays GRMZM2G099593 N 0.863
ORGLA11G0201600 Oryza glaberrima ORGLA11G0201600 N 0.861
OBART11G01070 Oryza barthii OBART11G01070 N 0.861
Si028270m.g Setaria italica Si028270m.g N 0.860
Pavir.Ib01500 Panicum virgatum Pavir.Ib01500 N 0.858
Si039519m.g Setaria italica Si039519m.g N 0.858
Sb01g036870 Sorghum bicolor Sb01g036870 N 0.858
GRMZM2G030272 Zea mays GRMZM2G030272 N 0.855
Si027998m.g Setaria italica Si027998m.g N 0.853
Si027769m.g Setaria italica Si027769m.g N 0.853
F775_31089 Aegilops tauschii F775_31089 N 0.852
Traes_4BL_A8C6FBEB6 Triticum aestivum Traes_4BL_A8C6FBEB6 N 0.852
TRIUR3_06231 Triticum urartu TRIUR3_06231 N 0.852
Traes_4DL_3140A8240 Triticum aestivum Traes_4DL_3140A8240 N 0.852
Traes_4AS_70DF607CC Triticum aestivum Traes_4AS_70DF607CC N 0.852
MLOC_57764 Hordeum vulgare MLOC_57764 N 0.852
BRADI1G63910 Brachypodium distachyon BRADI1G63910 N 0.852
BGIOSGA012525 Oryza indica BGIOSGA012525 N 0.850
ORUFI03G16080 Oryza rufipogon ORUFI03G16080 N 0.850
ONIVA03G16490 Oryza nivara ONIVA03G16490 N 0.850
OBART03G15470 Oryza barthii OBART03G15470 N 0.850
OPUNC03G15030 Oryza punctata OPUNC03G15030 N 0.850
OGLUM03G15660 Oryza glumaepatula OGLUM03G15660 N 0.850
BGIOSGA012523 Oryza indica BGIOSGA012523 N 0.850
OB03G25300 Oryza brachyantha OB03G25300 N 0.850
OS03G0321700 Oryza sativa OS03G0321700 N 0.850
LPERR03G13630 Leersia perrieri LPERR03G13630 N 0.850
OLONG_001744 Oryza longistaminata OLONG_001744 N 0.850
ORGLA03G0148400 Oryza glaberrima ORGLA03G0148400 N 0.850
GRMZM2G461648 Zea mays GRMZM2G461648 N 0.846
Si027946m.g Setaria italica Si027946m.g N 0.843
Si027328m.g Setaria italica Si027328m.g N 0.840
LPERR10G04210 Leersia perrieri LPERR10G04210 I 0.838
OPUNC10G05310 Oryza punctata OPUNC10G05310 N 0.836
ORGLA10G0049300 Oryza glaberrima ORGLA10G0049300 N 0.836
OMERI10G04260 Oryza meridionalis OMERI10G04260 N 0.836
OBART10G05920 Oryza barthii OBART10G05920 N 0.836
Pavir.Ia03459 Panicum virgatum Pavir.Ia03459 N 0.833
GRMZM2G060918 Zea mays GRMZM2G060918 N 0.832
OLONG_022888 Oryza longistaminata OLONG_022888 N 0.830
ORUFI11G01040 Oryza rufipogon ORUFI11G01040 N 0.828
OS11G0116900 Oryza sativa OS11G0116900 N 0.828
OS12G0116400 Oryza sativa OS12G0116400 N 0.828
ORUFI12G01160 Oryza rufipogon ORUFI12G01160 N 0.828
ORGLA12G0007300 Oryza glaberrima ORGLA12G0007300 N 0.828
OPUNC12G00960 Oryza punctata OPUNC12G00960 N 0.828
ORGLA11G0201700 Oryza glaberrima ORGLA11G0201700 N 0.828
OPUNC11G00940 Oryza punctata OPUNC11G00940 N 0.828
ONIVA11G01030 Oryza nivara ONIVA11G01030 N 0.828
OBART11G01090 Oryza barthii OBART11G01090 N 0.828
OBART12G00820 Oryza barthii OBART12G00820 N 0.828
OB12G11010 Oryza brachyantha OB12G11010 N 0.828
LPERR12G01060 Leersia perrieri LPERR12G01060 N 0.828
LPERR11G00950 Leersia perrieri LPERR11G00950 N 0.828
BGIOSGA034615 Oryza indica BGIOSGA034615 N 0.828
BRADI4G25717 Brachypodium distachyon BRADI4G25717 N 0.828
BGIOSGA036759 Oryza indica BGIOSGA036759 N 0.828
OGLUM12G01270 Oryza glumaepatula OGLUM12G01270 N 0.828
OGLUM05G21430 Oryza glumaepatula OGLUM05G21430 N 0.827
ORGLA05G0177300 Oryza glaberrima ORGLA05G0177300 N 0.827
OBART05G20320 Oryza barthii OBART05G20320 N 0.827
GSMUA_Achr7G22020_001 Musa acuminata GSMUA_Achr7G22020_001 I 0.826
ONIVA05G21450 Oryza nivara ONIVA05G21450 N 0.826
F775_31341 Aegilops tauschii F775_31341 I 0.826
TRIUR3_34396 Triticum urartu TRIUR3_34396 I 0.825
Traes_1BL_B4AFDB663 Triticum aestivum Traes_1BL_B4AFDB663 I 0.825
BGIOSGA032700 Oryza indica BGIOSGA032700 N 0.825
Traes_1AL_B24F28600 Triticum aestivum Traes_1AL_B24F28600 I 0.825
ONIVA10G05410 Oryza nivara ONIVA10G05410 N 0.825
GRMZM2G063216 Zea mays GRMZM2G063216 N 0.824
MLOC_34522 Hordeum vulgare MLOC_34522 N 0.824
MLOC_57051 Hordeum vulgare MLOC_57051 I 0.824
OB11G10740 Oryza brachyantha OB11G10740 N 0.824
Traes_4DS_FE38A59D0 Triticum aestivum Traes_4DS_FE38A59D0 N 0.824
Traes_4AL_9E0D1CFA6 Triticum aestivum Traes_4AL_9E0D1CFA6 N 0.824
Traes_4BS_A6D9EB0E5 Triticum aestivum Traes_4BS_A6D9EB0E5 N 0.824
PDK_20s1519811g002 Phoenix dactylifera PDK_20s1519811g002 I 0.824
F775_28648 Aegilops tauschii F775_28648 N 0.824
Si026831m.g Setaria italica Si026831m.g N 0.823
Si011007m.g Setaria italica Si011007m.g N 0.823
BRADI2G22230 Brachypodium distachyon BRADI2G22230 I 0.821
GRMZM2G065290 Zea mays GRMZM2G065290 I 0.821
Sb03g038180 Sorghum bicolor Sb03g038180 I 0.821
ORUFI10G06270 Oryza rufipogon ORUFI10G06270 N 0.821
LPERR05G16160 Leersia perrieri LPERR05G16160 N 0.819
Pavir.J31578 Panicum virgatum Pavir.J31578 N 0.819
OPUNC05G17990 Oryza punctata OPUNC05G17990 N 0.818
Traes_1AL_309623B48 Triticum aestivum Traes_1AL_309623B48 N 0.818
TRIUR3_22129 Triticum urartu TRIUR3_22129 N 0.818
OB05G27840 Oryza brachyantha OB05G27840 N 0.818
F775_02926 Aegilops tauschii F775_02926 N 0.818
Traes_1BL_46340D685 Triticum aestivum Traes_1BL_46340D685 N 0.818
Traes_1DL_DFE1721E0 Triticum aestivum Traes_1DL_DFE1721E0 N 0.818
Pavir.J16737 Panicum virgatum Pavir.J16737 N 0.817
GSMUA_Achr8G25110_001 Musa acuminata GSMUA_Achr8G25110_001 I 0.817
MTR_5g067700 Medicago truncatula MTR_5g067700 I 0.817
F775_03972 Aegilops tauschii F775_03972 N 0.817
Pavir.J38024 Panicum virgatum Pavir.J38024 N 0.816
TRIUR3_14306 Triticum urartu TRIUR3_14306 I 0.816
Al_scaffold_0004_2305 Arabidopsis lyrata Al_scaffold_0004_2305 I 0.816
PDK_20s1519811g001 Phoenix dactylifera PDK_20s1519811g001 I 0.816
OLONG_007113 Oryza longistaminata OLONG_007113 N 0.816
Pavir.J37617 Panicum virgatum Pavir.J37617 N 0.816
OMERI05G18240 Oryza meridionalis OMERI05G18240 N 0.816
fgenesh1_pm.C_scaffold_4001818 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4001818 I 0.816
OS05G0478700 Oryza sativa OS05G0478700 N 0.816
Si005138m.g Setaria italica Si005138m.g N 0.816
ORUFI05G21590 Oryza rufipogon ORUFI05G21590 N 0.816
BGIOSGA017861 Oryza indica BGIOSGA017861 N 0.816
ONIVA01G40380 Oryza nivara ONIVA01G40380 N 0.814
OGLUM01G39380 Oryza glumaepatula OGLUM01G39380 N 0.814
OPUNC01G34290 Oryza punctata OPUNC01G34290 N 0.814
ORGLA01G0292000 Oryza glaberrima ORGLA01G0292000 N 0.814
ORUFI01G38680 Oryza rufipogon ORUFI01G38680 N 0.814
MLOC_11088 Hordeum vulgare MLOC_11088 N 0.814
BGIOSGA000583 Oryza indica BGIOSGA000583 N 0.814
Cucsa.259110 Cucumis sativus Cucsa.259110 I 0.813
Sb08g002590 Sorghum bicolor Sb08g002590 N 0.813
LPERR01G30490 Leersia perrieri LPERR01G30490 I 0.813
BGIOSGA004703 Oryza indica BGIOSGA004703 I 0.812
OS01G0820700 Oryza sativa OS01G0820700 I 0.812
ORUFI01G38660 Oryza rufipogon ORUFI01G38660 I 0.812
OB01G44140 Oryza brachyantha OB01G44140 I 0.812
ONIVA01G40340 Oryza nivara ONIVA01G40340 I 0.812
ORGLA01G0291800 Oryza glaberrima ORGLA01G0291800 I 0.812
Bo4g012750 Brassica oleracea Bo4g012750 I 0.812
F775_23182 Aegilops tauschii F775_23182 I 0.812
BRADI2G53495 Brachypodium distachyon BRADI2G53495 I 0.812
Traes_3DL_48F7A19D2 Triticum aestivum Traes_3DL_48F7A19D2 I 0.812
Bra004586 Brassica rapa Bra004586 I 0.811
Traes_3AL_2297D6E18 Triticum aestivum Traes_3AL_2297D6E18 I 0.811
OMERI01G32500 Oryza meridionalis OMERI01G32500 N 0.811
OBART01G35310 Oryza barthii OBART01G35310 I 0.810
Pavir.J18239 Panicum virgatum Pavir.J18239 I 0.810
VIT_02s0025g01280 Vitis vinifera VIT_02s0025g01280 I 0.809
Pm024064 Prunus mume Pm024064 I 0.809
mgf020540m Mimulus guttatus mgf020540m I 0.809
cassava42820.valid.m1 Manihot esculenta cassava42820.valid.m1 I 0.809
Si028202m.g Setaria italica Si028202m.g I 0.808
Cucsa.078810 Cucumis sativus Cucsa.078810 I 0.808
GLYMA07G06320 Glycine max GLYMA07G06320 I 0.808
BRADI4G44350 Brachypodium distachyon BRADI4G44350 I 0.808