orange1.1g018407m.g (Citrus sinensis)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 orange1.1g018407m.g T356639_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WRKY55
M07392_2.00
Arabidopsis thaliana
HWAGTCAACGNH

DNCGTTGACTWD
Dap-seq
OMalley et al.(2016)
WRKY55_col_a
0.852 0.746
WRKY70
M07399_2.00
Arabidopsis thaliana
HAAAGTCAACGNN

NNCGTTGACTTTD
Dap-seq
OMalley et al.(2016)
WRKY70_col
0.831 0.593
WRKY62
M02561_2.00
Arabidopsis thaliana
TRGTCAAM

KTTGACYA
PBM
Weirauch et al.(2014)
pTH8246
0.826 0.508
WRKY53
M01090_2.00
Arabidopsis thaliana
RGTCAACNN

NNGTTGACY
PBM
Sullivan et al.(2014)
pTH8245
0.821 0.627
WRKY46
M07395_2.00
Arabidopsis thaliana
VAAAGTCAAMG

CKTTGACTTTB
Dap-seq
OMalley et al.(2016)
WRKY46_col_a
0.818 0.661
WRKY46
M07396_2.00
Arabidopsis thaliana
HRAAGTCAACG

CGTTGACTTYD
Dap-seq
OMalley et al.(2016)
WRKY46_colamp_a
0.818 0.661
WRKY38
M00901_2.00
Arabidopsis thaliana
NNRGTCAACBN

NVGTTGACYNN
PBM
Franco-Zorrilla et al.(2014)
WRKY38
0.811 0.508
WRKY30
M02563_2.00
Arabidopsis thaliana
RGTCAACNNN

NNNGTTGACY
PBM
Weirauch et al.(2014)
pTH7611
0.811 0.559
WRKY30
M07422_2.00
Arabidopsis thaliana
DAAGTCAACGN

NCGTTGACTTH
Dap-seq
OMalley et al.(2016)
WRKY30_col_a
0.811 0.559
WRKY30
M07423_2.00
Arabidopsis thaliana
NNAAGTCAACGNH

DNCGTTGACTTNN
Dap-seq
OMalley et al.(2016)
WRKY30_colamp_a
0.811 0.559
WRKY43
M02555_2.00
Arabidopsis thaliana
NRGTCAAHNN

NNDTTGACYN
PBM
Weirauch et al.(2014)
pTH7373
0.809 0.576
WRKY43
M07393_2.00
Arabidopsis thaliana
NNAAAGTCAACGNN

NNCGTTGACTTTNN
Dap-seq
OMalley et al.(2016)
WRKY43_col_a
0.809 0.576
WRKY43
M07394_2.00
Arabidopsis thaliana
NNNNAAAGTCAACGN

NCGTTGACTTTNNNN
Dap-seq
OMalley et al.(2016)
WRKY43_colamp_a
0.809 0.576
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g018407m WRKY 186 246

Links

Other WRKY family TFs
Other Citrus sinensis TFs

818 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
A1O1_04664 Capronia coronata A1O1_04664 I 0.000
A1O3_06687 Capronia epimyces A1O3_06687 N 0.000
A1O5_09249 Cladophialophora psammophila A1O5_09249 I 0.000
A1O7_07701 Cladophialophora yegresii A1O7_07701 I 0.000
A1O9_01966 Exophiala aquamarina A1O9_01966 I 0.000
EPUS_00089 Endocarpon pusillum EPUS_00089 I 0.000
FOXG_05651 Fusarium oxysporum FOXG_05651 I 0.000
G647_02381 Cladophialophora carrionii G647_02381 I 0.000
HMPREF1120_01670 Exophiala dermatitidis HMPREF1120_01670 I 0.000
MYCTH_122893 Myceliophthora thermophila MYCTH_122893 I 0.000
OIDMADRAFT_141009 Oidiodendron maius OIDMADRAFT_141009 I 0.000
PAAG_02161 Paracoccidioides sp lutzii PAAG_02161 N 0.000
PDIP_88440 Penicillium digitatum PDIP_88440 I 0.000
PITC_097210 Penicillium italicum PITC_097210 N 0.000
PV04_08189 Capronia semiimmersa PV04_08189 I 0.000
PV05_09089 Exophiala xenobiotica PV05_09089 I 0.000
PV06_02589 Exophiala oligosperma PV06_02589 I 0.000
PV07_11936 Cladophialophora immunda PV07_11936 I 0.000
PV08_11364 Exophiala spinifera PV08_11364 I 0.000
PV11_06331 Exophiala sideris PV11_06331 I 0.000
TRIREDRAFT_119826 Trichoderma reesei TRIREDRAFT_119826 I 0.000
Z517_03357 Fonsecaea pedrosoi Z517_03357 I 0.000
Z518_06732 Rhinocladiella mackenziei Z518_06732 I 0.000
Z519_05358 Cladophialophora bantiana Z519_05358 I 0.000