CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genewise1.C_90801
(
Cochliobolus heterostrophus C5
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_Genewise1.C_90801
T389836_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_10600
M01373_2.00
Aspergillus nidulans
YCGGAWAW
WTWTCCGR
PBM
Lambert et al.(2019)
pEX0427
0.548
0.526
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1.C_90801
Zinc cluster
42
79
RACDVCKARKSKCSGGQPCDSCARRRVPCQYEATYTRG
Links
Other
Zinc cluster
family TFs
Other
Cochliobolus heterostrophus C5
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
COCC4DRAFT_153890
Bipolaris maydis
COCC4DRAFT_153890
I
0.683
COCCADRAFT_40704
Bipolaris zeicola
COCCADRAFT_40704
I
0.610
COCVIDRAFT_39465
Bipolaris victoriae
COCVIDRAFT_39465
I
0.610
COCMIDRAFT_48551
Bipolaris oryzae
COCMIDRAFT_48551
I
0.610
COCSADRAFT_143282
Bipolaris sorokiniana
COCSADRAFT_143282
I
0.610
HMPREF1624_05727
Sporothrix schenckii
HMPREF1624_05727
I
0.593
MGG_13919
Magnaporthe oryzae
MGG_13919
N
0.566
LEMA_P031570.1
Leptosphaeria maculans
LEMA_P031570.1
I
0.563
MAPG_10268
Magnaporthe poae
MAPG_10268
I
0.558
PFICI_12506
Pestalotiopsis fici
PFICI_12506
I
0.557
GLRG_08912
Colletotrichum graminicola
GLRG_08912
I
0.553
GLRG_08945
Colletotrichum graminicola
GLRG_08945
I
0.553
CGGC5_239
Colletotrichum gloeosporioides
CGGC5_239
I
0.553
CSUB01_07904
Colletotrichum sublineola
CSUB01_07904
I
0.553
CFIO01_05979
Colletotrichum fioriniae
CFIO01_05979
I
0.553
CH063_09531
Colletotrichum higginsianum
CH063_09531
I
0.553
CFIO01_03929
Colletotrichum fioriniae
CFIO01_03929
I
0.553
CADAORAG00012148
Aspergillus oryzae
CADAORAG00012148
I
0.548
CADAFLAG00010143
Aspergillus flavus
CADAFLAG00010143
I
0.548
ANIA_10600
Aspergillus nidulans
CADANIAG00005586
D
0.548
GGTG_05646
Gaeumannomyces graminis
GGTG_05646
N
0.543
MGG_02226
Magnaporthe oryzae
MGG_02226
I
0.543