OBART09G16810 (Oryza barthii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OBART09G16810 T003172_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1A
M09710_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1A_01 		0.924 0.981
DREB1A
M09711_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$SED_Q2 		0.924 0.981
Q8GZQ2_MAIZE
M09720_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1A_02 		0.706 0.774
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART09G16810.1 AP2 31 84

Links

Other AP2 family TFs
Other Oryza barthii TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
DREB1A Oryza indica BGIOSGA029415 I 0.924
BRADI4G35610 Brachypodium distachyon BRADI4G35610 I 0.708
BRADI4G35650 Brachypodium distachyon BRADI4G35650 I 0.825
F775_27111 Aegilops tauschii F775_27111 I 0.777
GRMZM2G069082 Zea mays GRMZM2G069082 I 0.705
GRMZM2G069126 Zea mays GRMZM2G069126 I 0.795
GRMZM2G069146 Zea mays GRMZM2G069146 I 0.806
GRMZM2G124011 Zea mays GRMZM2G124011 I 0.802
GRMZM2G124037 Zea mays GRMZM2G124037 I 0.710
GRMZM2G175856 Zea mays GRMZM2G175856 N 0.000
LPERR09G12950 Leersia perrieri LPERR09G12950 I 0.845
OBART09G16830 Oryza barthii OBART09G16830 I 0.738
OGLUM09G17430 Oryza glumaepatula OGLUM09G17430 I 0.924
OMERI09G12480 Oryza meridionalis OMERI09G12480 I 0.000
OMERI09G12490 Oryza meridionalis OMERI09G12490 I 0.924
ONIVA09G17900 Oryza nivara ONIVA09G17900 I 0.924
OPUNC09G15260 Oryza punctata OPUNC09G15260 I 0.724
OPUNC09G15280 Oryza punctata OPUNC09G15280 I 0.000
OPUNC09G15290 Oryza punctata OPUNC09G15290 I 0.924
ORGLA08G0220100 Oryza glaberrima ORGLA08G0220100 I 0.772
ORUFI09G18210 Oryza rufipogon ORUFI09G18210 I 0.924
DREB1A Oryza sativa OS09G0522200 D 0.924
Pavir.Ba01280 Panicum virgatum Pavir.Ba01280 I 0.916
Pavir.Ba01281 Panicum virgatum Pavir.Ba01281 I 0.785
Pavir.Fa00114 Panicum virgatum Pavir.Fa00114 N 0.000
Pavir.Fb02246 Panicum virgatum Pavir.Fb02246 I 0.692
Pavir.J03891 Panicum virgatum Pavir.J03891 I 0.918
Pavir.J03892 Panicum virgatum Pavir.J03892 I 0.825
Pavir.J03893 Panicum virgatum Pavir.J03893 I 0.827
Pavir.J27101 Panicum virgatum Pavir.J27101 I 0.851
Pavir.J32829 Panicum virgatum Pavir.J32829 N 0.000
Q8GZQ2_MAIZE Zea mays Q8GZQ2_MAIZE D 0.706
Sb02g030300 Sorghum bicolor Sb02g030300 I 0.000
Sb02g030320 Sorghum bicolor Sb02g030320 I 0.851
Sb02g030330 Sorghum bicolor Sb02g030330 I 0.845
Sb05g006275 Sorghum bicolor Sb05g006275 I 0.843
Sb07g025210 Sorghum bicolor Sb07g025210 N 0.000
Si030998m.g Setaria italica Si030998m.g I 0.918
Si031001m.g Setaria italica Si031001m.g I 0.851
Traes_5BL_0C3609EF0 Triticum aestivum Traes_5BL_0C3609EF0 N 0.000
Traes_5BL_5299B6B33 Triticum aestivum Traes_5BL_5299B6B33 N 0.000
Traes_5BL_D16B19610 Triticum aestivum Traes_5BL_D16B19610 I 0.777