Q84JE9_HORVU (Hordeum vulgare)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Q84JE9_HORVU T004921_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q84JE9_HORVU
M09718_2.00		 Hordeum vulgare Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DRF13_01		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q84ND8_HORVU
M09719_2.00 		Hordeum vulgare Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DRF11_01 		0.823 1.000
Q1ESI9_MAIZE
M09714_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB2A_02 		0.724 0.900
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Q84JE9_HORVU AP2 92 143

Links

Other AP2 family TFs
Other Hordeum vulgare TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00023p00044590 Amborella trichopoda AMTR_s00023p00044590 I 0.680
BGIOSGA018253 Oryza indica BGIOSGA018253 I 0.712
Bo9g177130 Brassica oleracea Bo9g177130 I 0.680
BRADI2G29960 Brachypodium distachyon BRADI2G29960 I 0.744
F775_32062 Aegilops tauschii F775_32062 I 0.732
GRMZM2G006745 Zea mays GRMZM2G006745 I 0.724
gw1.81.143.1 Physcomitrella patens gw1.81.143.1 I 0.703
LPERR05G09930 Leersia perrieri LPERR05G09930 I 0.734
MLOC_45501 Hordeum vulgare MLOC_45501 I 0.715
MLOC_77405 Hordeum vulgare MLOC_77405 I 0.823
OB05G20700 Oryza brachyantha OB05G20700 I 0.728
OBART05G12580 Oryza barthii OBART05G12580 I 0.703
OGLUM05G13290 Oryza glumaepatula OGLUM05G13290 I 0.712
OLONG_017780 Oryza longistaminata OLONG_017780 I 0.712
OMERI05G11290 Oryza meridionalis OMERI05G11290 I 0.712
ONIVA05G13030 Oryza nivara ONIVA05G13030 I 0.712
OPUNC05G10700 Oryza punctata OPUNC05G10700 I 0.712
ORGLA05G0107600 Oryza glaberrima ORGLA05G0107600 I 0.703
ORUFI05G13560 Oryza rufipogon ORUFI05G13560 I 0.702
Pavir.Ca01725 Panicum virgatum Pavir.Ca01725 I 0.726
Pavir.Cb01298 Panicum virgatum Pavir.Cb01298 I 0.726
Q1ESI9_MAIZE Zea mays Q1ESI9_MAIZE D 0.724
Q84ND8_HORVU Hordeum vulgare Q84ND8_HORVU D 0.823
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.678
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.678
Sb09g016150 Sorghum bicolor Sb09g016150 I 0.726
Si022619m.g Setaria italica Si022619m.g I 0.696
Traes_1AL_A9FB6BF52 Triticum aestivum Traes_1AL_A9FB6BF52 I 0.732
Traes_1BL_BDF0801D01 Triticum aestivum Traes_1BL_BDF0801D01 I 0.732
TRIUR3_17409 Triticum urartu TRIUR3_17409 I 0.732
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.683