Bostr.19424s1037 (Boechera stricta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Bostr.19424s1037 T007588_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2A
M06655_2.00 		Arabidopsis thaliana
NNNNHDHMACCGMCWYHNNNN
NNNNDRWGKCGGTKDHDNNNN		 Dap-seq
OMalley et al.(2016)
DREB2_col_a 		0.750 0.898
DREB2A
M06656_2.00 		Arabidopsis thaliana
NHNHMACCGMCWTWD
HWAWGKCGGTKDNDN		 Dap-seq
OMalley et al.(2016)
DREB2_colamp_a 		0.750 0.898
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.707 0.878
Q8H769_WHEAT
M09721_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1_01 		0.678 0.816
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.19424s1037.1.p AP2 76 127
Bostr.19424s1037.2.p AP2 76 127

Links

Other AP2 family TFs
Other Boechera stricta TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29820.m001008 Ricinus communis 29820.m001008 I 0.683
DREB2B Arabidopsis thaliana AT3G11020 I 0.692
DREB2A Arabidopsis thaliana AT5G05410 D 0.750
BGIOSGA002846 Oryza indica BGIOSGA002846 I 0.679
Bo1g141310 Brassica oleracea Bo1g141310 I 0.748
Bo2g006960 Brassica oleracea Bo2g006960 I 0.768
Bo3g063910 Brassica oleracea Bo3g063910 I 0.742
Bo5g136930 Brassica oleracea Bo5g136930 I 0.735
Bostr.13129s0423 Boechera stricta Bostr.13129s0423 I 0.747
Bra001386 Brassica rapa Bra001386 I 0.744
Bra005852 Brassica rapa Bra005852 I 0.764
Bra028759 Brassica rapa Bra028759 I 0.768
Bra029889 Brassica rapa Bra029889 I 0.735
Bra034159 Brassica rapa Bra034159 I 0.758
Cagra.1504s0045 Capsella grandiflora Cagra.1504s0045 I 0.756
Cagra.1655s0066 Capsella grandiflora Cagra.1655s0066 I 0.776
Cagra.7053s0020 Capsella grandiflora Cagra.7053s0020 I 0.697
Carubv10001099m.g Capsella rubella Carubv10001099m.g I 0.756
Carubv10013771m.g Capsella rubella Carubv10013771m.g I 0.776
Carubv10023556m.g Capsella rubella Carubv10023556m.g I 0.697
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.685
cassava46663.m1 Manihot esculenta cassava46663.m1 I 0.686
chr1.LjT01D01.90.nd Lotus japonicus chr1.LjT01D01.90.nd I 0.710
Ciclev10032029m.g Citrus clementina Ciclev10032029m.g I 0.681
Cla006713 Citrullus lanatus Cla006713 I 0.688
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.689
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I 0.677
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.689
F775_05774 Aegilops tauschii F775_05774 I 0.678
DREB2B Arabidopsis lyrata fgenesh2_kg.3__1148__AT3G11020.1 I 0.750
DREB2A Arabidopsis lyrata fgenesh2_kg.6__469__AT5G05410.1 I 0.756
GLYMA07G19221 Glycine max GLYMA07G19221 I 0.704
GLYMA18G43750 Glycine max GLYMA18G43750 I 0.694
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I 0.678
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.678
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.704
gw1.120.55.1 Physcomitrella patens gw1.120.55.1 I 0.681
MLOC_66686 Hordeum vulgare MLOC_66686 I 0.678
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.684
OB01G13930 Oryza brachyantha OB01G13930 I 0.679
OBART01G04210 Oryza barthii OBART01G04210 I 0.679
OGLUM01G04560 Oryza glumaepatula OGLUM01G04560 I 0.679
OLONG_014228 Oryza longistaminata OLONG_014228 I 0.679
OMERI01G04110 Oryza meridionalis OMERI01G04110 I 0.679
ONIVA01G04630 Oryza nivara ONIVA01G04630 I 0.679
OPUNC01G03970 Oryza punctata OPUNC01G03970 I 0.679
orange1.1g019546m.g Citrus sinensis orange1.1g019546m.g I 0.681
ORGLA01G0037700 Oryza glaberrima ORGLA01G0037700 I 0.679
ORUFI01G04360 Oryza rufipogon ORUFI01G04360 I 0.679
DREB2A Oryza sativa OS01G0165000 I 0.679
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.684
PGSC0003DMG401023951 Solanum tuberosum PGSC0003DMG401023951 I 0.700
PK07402.1 Cannabis sativa PK07402.1 D 0.707
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.693
Q8H769_WHEAT Triticum aestivum Q8H769_WHEAT D 0.678
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I 0.678
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.707
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I 0.678
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.707
Solyc06g050520.1 Solanum lycopersicum Solyc06g050520.1 I 0.694
Thhalv10021161m.g Eutrema salsugineum Thhalv10021161m.g I 0.760
TRAES3BF064700080CFD_g Triticum aestivum TRAES3BF064700080CFD_g I 0.678
Traes_3AS_62742A0471 Triticum aestivum Traes_3AS_62742A0471 I 0.678
TRIUR3_17973 Triticum urartu TRIUR3_17973 I 0.678
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.686