Gorai.008G253900 (Gossypium raimondii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Gorai.008G253900 T008632_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G65130
M06686_2.00 		Arabidopsis thaliana
YCDYCDCCRCCGCCN
NGGCGGYGGHGRHGR		 Dap-seq
OMalley et al.(2016)
At5g65130_col_a 		0.702 0.780
AT5G65130
M06687_2.00 		Arabidopsis thaliana
NNNNHNNHDSCRCCGMCMW
WKGKCGGYGSHDNNDNNNN		 Dap-seq
OMalley et al.(2016)
At5g65130_colamp_a 		0.702 0.780
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.008G253900.1 AP2 105 156

Links

Other AP2 family TFs
Other Gossypium raimondii TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29738.m001046 Ricinus communis 29738.m001046 I 0.000
29917.m002016 Ricinus communis 29917.m002016 I 0.000
29983.m003125 Ricinus communis 29983.m003125 I 0.000
AMTR_s00021p00209320 Amborella trichopoda AMTR_s00021p00209320 I 0.000
AMTR_s00049p00217400 Amborella trichopoda AMTR_s00049p00217400 I 0.000
AMTR_s00060p00054700 Amborella trichopoda AMTR_s00060p00054700 I 0.000
Aquca_002_01098 Aquilegia coerulea Aquca_002_01098 I 0.000
Aquca_036_00051 Aquilegia coerulea Aquca_036_00051 I 0.000
Aquca_054_00006 Aquilegia coerulea Aquca_054_00006 I 0.000
BGIOSGA006133 Oryza indica BGIOSGA006133 N 0.000
BGIOSGA014881 Oryza indica BGIOSGA014881 N 0.000
BGIOSGA018654 Oryza indica BGIOSGA018654 I 0.000
Bostr.7867s0691 Boechera stricta Bostr.7867s0691 I 0.000
Bra024197 Brassica rapa Bra024197 I 0.000
BRADI1G43840 Brachypodium distachyon BRADI1G43840 I 0.000
BRADI2G33307 Brachypodium distachyon BRADI2G33307 I 0.000
BRADI3G47627 Brachypodium distachyon BRADI3G47627 I 0.000
BRADI5G13450 Brachypodium distachyon BRADI5G13450 N 0.000
cassava12330.valid.m1 Manihot esculenta cassava12330.valid.m1 I 0.000
cassava14633.m1 Manihot esculenta cassava14633.m1 I 0.000
cassava17166.m1 Manihot esculenta cassava17166.m1 I 0.000
cassava3690.m1 Manihot esculenta cassava3690.m1 I 0.000
cassava46566.m1 Manihot esculenta cassava46566.m1 I 0.000
Ca_06348 Cicer arietinum Ca_06348 I 0.000
Ca_23230 Cicer arietinum Ca_23230 N 0.000
chr1.CM0001.370.nd Lotus japonicus chr1.CM0001.370.nd N 0.000
chr2.CM0749.410.nc Lotus japonicus chr2.CM0749.410.nc I 0.000
chr6.LjT04E21.30.nc Lotus japonicus chr6.LjT04E21.30.nc I 0.000
Ciclev10015507m.g Citrus clementina Ciclev10015507m.g I 0.000
Ciclev10015976m.g Citrus clementina Ciclev10015976m.g I 0.000
Ciclev10017822m.g Citrus clementina Ciclev10017822m.g I 0.000
Cla004701 Citrullus lanatus Cla004701 I 0.000
Cla020673 Citrullus lanatus Cla020673 I 0.000
Cucsa.011210 Cucumis sativus Cucsa.011210 I 0.000
Cucsa.046530 Cucumis sativus Cucsa.046530 I 0.000
Cucsa.283900 Cucumis sativus Cucsa.283900 I 0.000
Eucgr.D00592 Eucalyptus grandis Eucgr.D00592 I 0.000
Eucgr.D00594 Eucalyptus grandis Eucgr.D00594 I 0.000
Eucgr.J02254 Eucalyptus grandis Eucgr.J02254 I 0.000
Eucgr.K01061 Eucalyptus grandis Eucgr.K01061 I 0.000
evm.TU.supercontig_83.99 Carica papaya evm.TU.supercontig_83.99 I 0.000
F775_00415 Aegilops tauschii F775_00415 N 0.000
F775_14938 Aegilops tauschii F775_14938 N 0.000
F775_30638 Aegilops tauschii F775_30638 I 0.000
gene27940-v1.0-hybrid Fragaria vesca gene27940-v1.0-hybrid I 0.000
gene29766-v1.0-hybrid Fragaria vesca gene29766-v1.0-hybrid I 0.000
GLYMA01G22510 Glycine max GLYMA01G22510 I 0.000
GLYMA02G11140 Glycine max GLYMA02G11140 I 0.000
GLYMA05G09110 Glycine max GLYMA05G09110 I 0.000
GLYMA13G30800 Glycine max GLYMA13G30800 I 0.000
GLYMA15G08480 Glycine max GLYMA15G08480 I 0.000
GLYMA16G07501 Glycine max GLYMA16G07501 N 0.000
GLYMA19G00640 Glycine max GLYMA19G00640 N 0.000
GLYMA19G08510 Glycine max GLYMA19G08510 N 0.000
GLYMA20G32690 Glycine max GLYMA20G32690 I 0.000
Gorai.006G034600 Gossypium raimondii Gorai.006G034600 I 0.000
Gorai.007G075300 Gossypium raimondii Gorai.007G075300 I 0.000
Gorai.008G155200 Gossypium raimondii Gorai.008G155200 I 0.000
GRMZM2G038073 Zea mays GRMZM2G038073 N 0.000
GRMZM2G104078 Zea mays GRMZM2G104078 N 0.000
GRMZM2G450445 Zea mays GRMZM2G450445 N 0.000
GSMUA_Achr2G16590_001 Musa acuminata GSMUA_Achr2G16590_001 I 0.000
GSMUA_Achr3G07330_001 Musa acuminata GSMUA_Achr3G07330_001 I 0.000
GSMUA_Achr9G01880_001 Musa acuminata GSMUA_Achr9G01880_001 I 0.000
GSMUA_AchrUn_randomG17050_001 Musa acuminata GSMUA_AchrUn_randomG17050_001 I 0.000
LPERR02G18380 Leersia perrieri LPERR02G18380 N 0.000
LPERR05G05170 Leersia perrieri LPERR05G05170 I 0.000
Lus10003668.g Linum usitatissimum Lus10003668.g N 0.000
Lus10018637.g Linum usitatissimum Lus10018637.g I 0.000
Lus10021708.g Linum usitatissimum Lus10021708.g I 0.000
Lus10039873.g Linum usitatissimum Lus10039873.g I 0.000
MDP0000283975 Malus domestica MDP0000283975 N 0.000
MDP0000663564 Malus domestica MDP0000663564 I 0.000
mgf018486m Mimulus guttatus mgf018486m I 0.000
MTR_1g093670 Medicago truncatula MTR_1g093670 I 0.000
MTR_2g014680 Medicago truncatula MTR_2g014680 I 0.000
MTR_4g088245 Medicago truncatula MTR_4g088245 I 0.000
MTR_7g033320 Medicago truncatula MTR_7g033320 I 0.000
MTR_8g069160 Medicago truncatula MTR_8g069160 I 0.000
OB05G15600 Oryza brachyantha OB05G15600 I 0.000
OB06G19430 Oryza brachyantha OB06G19430 I 0.000
OBART02G22660 Oryza barthii OBART02G22660 N 0.000
OBART04G16110 Oryza barthii OBART04G16110 N 0.000
OBART05G06140 Oryza barthii OBART05G06140 I 0.000
OGLUM02G22980 Oryza glumaepatula OGLUM02G22980 N 0.000
OGLUM04G16020 Oryza glumaepatula OGLUM04G16020 N 0.000
OGLUM05G06420 Oryza glumaepatula OGLUM05G06420 I 0.000
OLONG_005904 Oryza longistaminata OLONG_005904 N 0.000
OLONG_021085 Oryza longistaminata OLONG_021085 I 0.000
OLONG_021848 Oryza longistaminata OLONG_021848 N 0.000
OMERI01G02010 Oryza meridionalis OMERI01G02010 N 0.000
OMERI02G22200 Oryza meridionalis OMERI02G22200 N 0.000
ONIVA02G25300 Oryza nivara ONIVA02G25300 N 0.000
ONIVA04G14230 Oryza nivara ONIVA04G14230 N 0.000
ONIVA05G06750 Oryza nivara ONIVA05G06750 I 0.000
OPUNC02G20570 Oryza punctata OPUNC02G20570 N 0.000
OPUNC04G13980 Oryza punctata OPUNC04G13980 N 0.000
OPUNC05G05600 Oryza punctata OPUNC05G05600 I 0.000
orange1.1g021635m.g Citrus sinensis orange1.1g021635m.g I 0.000
ORGLA02G0193300 Oryza glaberrima ORGLA02G0193300 N 0.000
ORGLA05G0055000 Oryza glaberrima ORGLA05G0055000 I 0.000
ORUFI02G23890 Oryza rufipogon ORUFI02G23890 N 0.000
ORUFI04G17470 Oryza rufipogon ORUFI04G17470 N 0.000
ORUFI05G06530 Oryza rufipogon ORUFI05G06530 I 0.000
OS02G0594800 Oryza sativa OS02G0594800 N 0.000
OS05G0194500 Oryza sativa OS05G0194500 I 0.000
Pavir.Aa00442 Panicum virgatum Pavir.Aa00442 I 0.000
Pavir.Aa01341 Panicum virgatum Pavir.Aa01341 I 0.000
Pavir.Ab02181 Panicum virgatum Pavir.Ab02181 I 0.000
Pavir.Ab02919 Panicum virgatum Pavir.Ab02919 I 0.000
Pavir.Da01643 Panicum virgatum Pavir.Da01643 I 0.000
Pavir.Ga01597 Panicum virgatum Pavir.Ga01597 I 0.000
Pavir.Ga02265 Panicum virgatum Pavir.Ga02265 I 0.000
Pavir.Ga02302 Panicum virgatum Pavir.Ga02302 I 0.000
Pavir.Gb01338 Panicum virgatum Pavir.Gb01338 I 0.000
PDK_20s1306131g001 Phoenix dactylifera PDK_20s1306131g001 I 0.000
PDK_20s1381351g001 Phoenix dactylifera PDK_20s1381351g001 I 0.000
PGSC0003DMG400000809 Solanum tuberosum PGSC0003DMG400000809 I 0.000
PGSC0003DMG400009381 Solanum tuberosum PGSC0003DMG400009381 I 0.000
PGSC0003DMG400012607 Solanum tuberosum PGSC0003DMG400012607 I 0.000
PK17141.1 Cannabis sativa PK17141.1 I 0.000
PK25812.1 Cannabis sativa PK25812.1 I 0.000
PK28347.1 Cannabis sativa PK28347.1 I 0.000
Pm015625 Prunus mume Pm015625 I 0.000
POPTR_0001s35490 Populus trichocarpa POPTR_0001s35490 I 0.000
POPTR_0007s01350 Populus trichocarpa POPTR_0007s01350 I 0.000
POPTR_0010s13980 Populus trichocarpa POPTR_0010s13980 I 0.000
POPTR_0017s04800 Populus trichocarpa POPTR_0017s04800 I 0.000
PRUPE_ppa006948mg Prunus persica PRUPE_ppa006948mg I 0.000
SapurV1A.0079s0500 Salix purpurea SapurV1A.0079s0500 I 0.000
SapurV1A.0304s0050 Salix purpurea SapurV1A.0304s0050 I 0.000
SapurV1A.0716s0010 Salix purpurea SapurV1A.0716s0010 I 0.000
SapurV1A.1388s0020 Salix purpurea SapurV1A.1388s0020 I 0.000
SapurV1A.1828s0030 Salix purpurea SapurV1A.1828s0030 I 0.000
SapurV1A.2554s0030 Salix purpurea SapurV1A.2554s0030 I 0.000
SapurV1A.2846s0020 Salix purpurea SapurV1A.2846s0020 I 0.000
SapurV1A.3101s0030 Salix purpurea SapurV1A.3101s0030 I 0.000
Sb04g024780 Sorghum bicolor Sb04g024780 N 0.000
Sb06g020103 Sorghum bicolor Sb06g020103 I 0.000
Si006639m.g Setaria italica Si006639m.g I 0.000
Si012740m.g Setaria italica Si012740m.g N 0.000
Si017393m.g Setaria italica Si017393m.g I 0.000
Si019444m.g Setaria italica Si019444m.g I 0.000
Solyc02g077610.2 Solanum lycopersicum Solyc02g077610.2 I 0.000
Solyc02g093420.2 Solanum lycopersicum Solyc02g093420.2 I 0.000
Solyc07g053590.2 Solanum lycopersicum Solyc07g053590.2 I 0.000
TCM_008229 Theobroma cacao TCM_008229 I 0.000
TCM_016984 Theobroma cacao TCM_016984 I 0.000
TRAES3BF097400030CFD_g Triticum aestivum TRAES3BF097400030CFD_g I 0.000
Traes_2DL_3757D78B3 Triticum aestivum Traes_2DL_3757D78B3 N 0.000
Traes_2DL_AE270CBAA Triticum aestivum Traes_2DL_AE270CBAA N 0.000
Traes_2DL_AE270CBAA1 Triticum aestivum Traes_2DL_AE270CBAA1 N 0.000
Traes_6AL_C14335DC8 Triticum aestivum Traes_6AL_C14335DC8 I 0.000
Traes_6BL_B27806C89 Triticum aestivum Traes_6BL_B27806C89 I 0.000
Traes_6DL_2F3586557 Triticum aestivum Traes_6DL_2F3586557 I 0.000
Traes_7BS_99BF8BA2F Triticum aestivum Traes_7BS_99BF8BA2F I 0.000
Traes_7DS_78B5508C0 Triticum aestivum Traes_7DS_78B5508C0 I 0.000
ANAC073 Vitis vinifera VIT_12s0028g03050 I 0.000
VIT_14s0066g00360 Vitis vinifera VIT_14s0066g00360 I 0.000