Gorai.009G060600 (Gossypium raimondii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Gorai.009G060600 T008641_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF003
M06667_2.00 		Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN
NDRHDDHKRCGGYGGHGRH		 Dap-seq
OMalley et al.(2016)
ESE3_col_a 		0.857 0.980
ERF003
M06668_2.00 		Arabidopsis thaliana
HDYCKCCGCCGYHDH
DHDRCGGCGGMGRHD		 Dap-seq
OMalley et al.(2016)
ESE3_colamp_a 		0.857 0.980
WIN1
M01603_2.00 		Arabidopsis thaliana
VCRCCGCNNN
NNNGCGGYGB		 PBM
Weirauch et al.(2014)
pTH7566 		0.727 0.824
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.009G060600.1 AP2 6 57

Links

Other AP2 family TFs
Other Gossypium raimondii TFs

298 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29742.m001400 Ricinus communis 29742.m001400 I
AMTR_s00021p00223240 Amborella trichopoda AMTR_s00021p00223240 I
ERF023 Arabidopsis thaliana AT1G01250 D
Bo5g002600 Brassica oleracea Bo5g002600 I
Bo8g117810 Brassica oleracea Bo8g117810 I
Bostr.5325s0047 Boechera stricta Bostr.5325s0047 I
Bra032630 Brassica rapa Bra032630 I
Bra033274 Brassica rapa Bra033274 I
Cagra.1968s0069 Capsella grandiflora Cagra.1968s0069 I
Carubv10010347m.g Capsella rubella Carubv10010347m.g I
cassava32974.m1 Manihot esculenta cassava32974.m1 I
cassava43608.valid.m1 Manihot esculenta cassava43608.valid.m1 I
Ca_01325 Cicer arietinum Ca_01325 I
Ca_17638 Cicer arietinum Ca_17638 I
chr1.LjT43L07.200.nd Lotus japonicus chr1.LjT43L07.200.nd I
Ciclev10022410m.g Citrus clementina Ciclev10022410m.g I
fgenesh2_kg.1__103__AT1G01250.1 Arabidopsis lyrata fgenesh2_kg.1__103__AT1G01250.1 I
gene19141-v1.0-hybrid Fragaria vesca gene19141-v1.0-hybrid I
GLYMA03G41910 Glycine max GLYMA03G41910 I
GLYMA07G06080 Glycine max GLYMA07G06080 I
GLYMA16G02680 Glycine max GLYMA16G02680 I
GLYMA19G44580 Glycine max GLYMA19G44580 I
Gorai.007G109400 Gossypium raimondii Gorai.007G109400 I
Gorai.008G126000 Gossypium raimondii Gorai.008G126000 I
mgf020568m Mimulus guttatus mgf020568m I
MTR_7g117690 Medicago truncatula MTR_7g117690 I
orange1.1g029627m.g Citrus sinensis orange1.1g029627m.g I
PGSC0003DMG400007036 Solanum tuberosum PGSC0003DMG400007036 N
PK15554.1 Cannabis sativa PK15554.1 I
Pm018354 Prunus mume Pm018354 I
POPTR_0002s17320 Populus trichocarpa POPTR_0002s17320 I
POPTR_0002s17330 Populus trichocarpa POPTR_0002s17330 I
POPTR_0014s09540 Populus trichocarpa POPTR_0014s09540 I
POPTR_0855s00200 Populus trichocarpa POPTR_0855s00200 I
PRUPE_ppa026139mg Prunus persica PRUPE_ppa026139mg I
SapurV1A.0003s1030 Salix purpurea SapurV1A.0003s1030 I
SapurV1A.0013s0250 Salix purpurea SapurV1A.0013s0250 I
TCM_005130 Theobroma cacao TCM_005130 I
Thhalv10009402m.g Eutrema salsugineum Thhalv10009402m.g I
VIT_15s0046g00310 Vitis vinifera VIT_15s0046g00310 I