SapurV1A.0471s0080 (Salix purpurea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 SapurV1A.0471s0080 T009771_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF115
M06657_2.00 		Arabidopsis thaliana
CCGCCGYMRYHDCCR
YGGHDRYKRCGGCGG		 Dap-seq
OMalley et al.(2016)
ERF115_col_a 		0.723 0.776
ERF115
M06658_2.00 		Arabidopsis thaliana
CKCCGCCGYMRYHDY
RHDRYKRCGGCGGMG		 Dap-seq
OMalley et al.(2016)
ERF115_colamp_a 		0.723 0.776
A4F248_TOBAC
M09725_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRAF1_01 		0.719 0.918
RAP2-6
M00717_2.00 		Arabidopsis thaliana
NBGCYGNH
DNCRGCVN		 PBM
Chang et al.(2013)
pTH7225 		0.717 0.816
RAP2-6
M00841_2.00 		Arabidopsis thaliana
NGCCGHHNNN
NNNDDCGGCN		 PBM
Franco-Zorrilla et al.(2014)
RAP2.6 		0.717 0.816
RAP2-6
M06579_2.00 		Arabidopsis thaliana
HHDYCKCCGCCGYMD
HKRCGGCGGMGRHDD		 Dap-seq
OMalley et al.(2016)
RAP26_col_a 		0.717 0.816
RAP2-6
M06580_2.00 		Arabidopsis thaliana
CGCCGY
RCGGCG		 Dap-seq
OMalley et al.(2016)
RAP26_colamp_a 		0.717 0.816
A4F249_TOBAC
M09726_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRAF2_01 		0.714 0.918
AT2G33710
M01613_2.00 		Arabidopsis thaliana
NSMGCCGHMN
NKDCGGCKSN		 PBM
Weirauch et al.(2014)
pTH7543 		0.694 0.816
AT2G33710
M06606_2.00 		Arabidopsis thaliana
DBCGCCGCCGYHDHHDNH
DNHDDHDRCGGCGGCGVH		 Dap-seq
OMalley et al.(2016)
At2g33710_colamp_a 		0.694 0.816
AT2G33710
M06607_2.00 		Arabidopsis thaliana
NHDYCKCCGCCGYMD
HKRCGGCGGMGRHDN		 Dap-seq
OMalley et al.(2016)
At2g33710_col 		0.694 0.816
LOC_Os08g36920
M01634_2.00 		Oryza sativa
NNNGSCGHNN
NNDCGSCNNN		 PBM
Weirauch et al.(2014)
pTH8596 		0.688 0.796
ERF109
M00849_2.00 		Arabidopsis thaliana
NGCCGNHNN
NNDNCGGCN		 PBM
Franco-Zorrilla et al.(2014)
RRTF1 		0.683 0.837
ERF109
M06653_2.00 		Arabidopsis thaliana
CKSCGCCGYHWHHNN
NNDDWDRCGGCGSMG		 Dap-seq
OMalley et al.(2016)
RRTF1_col_a 		0.683 0.837
ERF109
M06654_2.00 		Arabidopsis thaliana
HNNHDSCGCCGYHWTHNNN
NNNDAWDRCGGCGSHDNND		 Dap-seq
OMalley et al.(2016)
RRTF1_colamp_a 		0.683 0.837
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0471s0080.1.p AP2 130 181

Links

Other AP2 family TFs
Other Salix purpurea TFs

349 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28859.m000324 Ricinus communis 28859.m000324 N
29758.m000681 Ricinus communis 29758.m000681 N
FRS10 Arabidopsis thaliana AT5G28530 N
Bo2g152930 Brassica oleracea Bo2g152930 N
Bostr.29827s0002 Boechera stricta Bostr.29827s0002 N
Bra020611 Brassica rapa Bra020611 N
Cagra.13833s0001 Capsella grandiflora Cagra.13833s0001 N
Carubv10000250m.g Capsella rubella Carubv10000250m.g N
cassava40276.m1 Manihot esculenta cassava40276.m1 N
cassava40936.m1 Manihot esculenta cassava40936.m1 N
Ca_07896 Cicer arietinum Ca_07896 N
Ciclev10014474m.g Citrus clementina Ciclev10014474m.g N
Ciclev10014481m.g Citrus clementina Ciclev10014481m.g N
Cucsa.044640 Cucumis sativus Cucsa.044640 N
Cucsa.100320 Cucumis sativus Cucsa.100320 N
Eucgr.D01451 Eucalyptus grandis Eucgr.D01451 N
Eucgr.H00883 Eucalyptus grandis Eucgr.H00883 N
gene15606-v1.0-hybrid Fragaria vesca gene15606-v1.0-hybrid N
GLYMA09G01540 Glycine max GLYMA09G01540 N
Gorai.005G129200 Gossypium raimondii Gorai.005G129200 N
Gorai.010G189600 Gossypium raimondii Gorai.010G189600 N
MDP0000249284 Malus domestica MDP0000249284 N
mgf004308m Mimulus guttatus mgf004308m N
orange1.1g005549m.g Citrus sinensis orange1.1g005549m.g N
orange1.1g005579m.g Citrus sinensis orange1.1g005579m.g N
PK07950.1 Cannabis sativa PK07950.1 N
PK09224.1 Cannabis sativa PK09224.1 N
Pm015052 Prunus mume Pm015052 N
FRS10 Populus trichocarpa POPTR_0014s16500 N
POPTR_0016s00900 Populus trichocarpa POPTR_0016s00900 N
PRUPE_ppa002276mg Prunus persica PRUPE_ppa002276mg N
PRUPE_ppa002284mg Prunus persica PRUPE_ppa002284mg N
SapurV1A.0054s0360 Salix purpurea SapurV1A.0054s0360 N
SapurV1A.0089s0660 Salix purpurea SapurV1A.0089s0660 N
Solyc07g045520.2 Solanum lycopersicum Solyc07g045520.2 N
TCM_020251 Theobroma cacao TCM_020251 N
TCM_030416 Theobroma cacao TCM_030416 N
Thhalv10003748m.g Eutrema salsugineum Thhalv10003748m.g N
VIT_00s0194g00200 Vitis vinifera VIT_00s0194g00200 N
FRS10 Vitis vinifera VIT_12s0057g00960 N