estExt_Genewise1Plus.C_12733 (Neurospora discreta)
APSES

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04383 (KilA-N) IPR018004 estExt_Genewise1Plus.C_12733 T013920_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU07246
M01653_2.00 		Neurospora crassa
NDCRCGN
NCGYGHN		 PBM
Weirauch et al.(2014)
pTH8957 		0.872 1.000
estExt_fgenesh2_pg.C_10694_CONSTRUCT
M01102_2.00 		PBM CONSTRUCTS
NNACGCGW
WCGCGTNN		 PBM
Lambert et al.(2019)
pTH9838 		0.789 0.577
ANIA_03154
M01650_2.00 		Aspergillus nidulans
NNACGCG
CGCGTNN		 PBM
Weirauch et al.(2014)
pTH8232 		0.778 0.487
MBP1
M00003_2.00 		Saccharomyces cerevisiae
VACGCGWD
HWCGCGTB		 PBM
Badis et al.(2008)
MBP1_4486 		0.762 0.603
MBP1
M01514_2.00 		Saccharomyces cerevisiae
NNNNDCRCGH
DCGYGHNNNN		 PBM
Zhu et al.(2009)
Mbp1 		0.762 0.603
MBP1
M07434_2.00 		Saccharomyces cerevisiae
NDCGCGH
DCGCGHN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0329.1 		0.762 0.603
MBP1
M08472_2.00 		Saccharomyces cerevisiae
NDCGCGH
DCGCGHN		 Misc
DeBoer et al.(2011)
YDL056W_500 		0.762 0.603
NCU07587
M01654_2.00 		Neurospora crassa
NNNDCRCGN
NCGYGHNNN		 PBM
Weirauch et al.(2014)
pTH9687 		0.700 0.474
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1Plus.C_12733 APSES 30 110

Links

Other APSES family TFs
Other Neurospora discreta TFs

430 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29983.m003255 Ricinus communis 29983.m003255 N 0.000
BGIOSGA000702 Oryza indica BGIOSGA000702 N 0.000
BRADI2G51790 Brachypodium distachyon BRADI2G51790 N 0.000
Eucgr.K00939 Eucalyptus grandis Eucgr.K00939 N 0.000
Gorai.005G204800 Gossypium raimondii Gorai.005G204800 N 0.000
GRMZM2G004690 Zea mays GRMZM2G004690 N 0.000
GRMZM2G082745 Zea mays GRMZM2G082745 N 0.000
GSMUA_Achr1G08820_001 Musa acuminata GSMUA_Achr1G08820_001 N 0.000
GSMUA_Achr2G02900_001 Musa acuminata GSMUA_Achr2G02900_001 N 0.000
GSMUA_AchrUn_randomG13850_001 Musa acuminata GSMUA_AchrUn_randomG13850_001 N 0.000
LPERR01G28620 Leersia perrieri LPERR01G28620 N 0.000
Lus10018560.g Linum usitatissimum Lus10018560.g N 0.000
Lus10039791.g Linum usitatissimum Lus10039791.g N 0.000
MDP0000089136 Malus domestica MDP0000089136 N 0.000
OB01G42000 Oryza brachyantha OB01G42000 N 0.000
OBART01G33150 Oryza barthii OBART01G33150 N 0.000
OGLUM01G37340 Oryza glumaepatula OGLUM01G37340 N 0.000
OLONG_014986 Oryza longistaminata OLONG_014986 N 0.000
OMERI01G30050 Oryza meridionalis OMERI01G30050 N 0.000
ONIVA01G37460 Oryza nivara ONIVA01G37460 N 0.000
OPUNC01G32160 Oryza punctata OPUNC01G32160 N 0.000
ORGLA01G0271200 Oryza glaberrima ORGLA01G0271200 N 0.000
ORUFI01G36290 Oryza rufipogon ORUFI01G36290 N 0.000
OS01G0780800 Oryza sativa OS01G0780800 N 0.000
PK16281.1 Cannabis sativa PK16281.1 N 0.000
SapurV1A.0492s0170 Salix purpurea SapurV1A.0492s0170 N 0.000
Sb03g036430 Sorghum bicolor Sb03g036430 N 0.000
Si002762m.g Setaria italica Si002762m.g N 0.000