Traes_6DL_EE9625E89 (Triticum aestivum)
AT hook

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02178 (AT_hook) IPR017956 Traes_6DL_EE9625E89 T017845_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BRADI3G55950
M01673_2.00 		Brachypodium distachyon
NNNNRHDDN
NHHDYNNNN		 PBM
Weirauch et al.(2014)
pTH9369 		0.991 1.000
OS02G0824300
M01688_2.00 		Oryza sativa
NNDWAWWN
NWWTWHNN		 PBM
Weirauch et al.(2014)
pTH8406 		0.991 1.000
AHL13
M01672_2.00 		Arabidopsis thaliana
NAWWTAWWWN
NWWWTAWWTN		 PBM
Weirauch et al.(2014)
pTH8202 		0.991 0.846
VIT_08s0007g04020
M01689_2.00 		Vitis vinifera
DBNDDDDDDN
NHHHHHHNVH		 PBM
Weirauch et al.(2014)
pTH9295 		0.991 0.808
TVAG_474020
M01106_2.00 		Trichomonas vaginalis
DNWWWAWW
WWTWWWNH		 PBM
Lambert et al.(2019)
pTH11493 		0.991 0.538
FGRRES_17512
M01105_2.00 		Fusarium graminearum
NNNDNWWWW
WWWWNHNNN		 PBM
Lambert et al.(2019)
pTH11412 		0.991 0.500
SUM1
M00008_2.00 		Saccharomyces cerevisiae
NNDWWWH
DWWWHNN		 PBM
Badis et al.(2008)
SUM1_2124 		0.991 0.462
SUM1
M07439_2.00 		Saccharomyces cerevisiae
DWAAATWWN
NWWATTTWH		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0398.1 		0.991 0.462
SUM1
M08478_2.00 		Saccharomyces cerevisiae
RYGWCASWAAW
WTTWSTGWCRY		 Misc
DeBoer et al.(2011)
YDR310C_383 		0.991 0.462
SUM1
M08479_2.00 		Saccharomyces cerevisiae
DWAAATWWN
NWWATTTWH		 Misc
DeBoer et al.(2011)
YDR310C_478 		0.991 0.462
MTR_4g101990
M01687_2.00 		Medicago truncatula
AAAWTAAT
ATTAWTTT		 PBM
Weirauch et al.(2014)
pTH9209 		0.991 0.423
PK00377.1
M01107_2.00 		Cannabis sativa
DAWWWAWW
WWTWWWTH		 PBM
Lambert et al.(2019)
pTH11338 		0.991 0.423
Q7DLU9_PEA
M09772_2.00 		Pisum sativum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HMGIY_01 		0.991 0.423
HMGA1
M09769_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HMGIY_01 		0.991 0.410
HMGA1
M09770_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HMGIY_Q4 		0.991 0.410
ANIA_01690
M01675_2.00 		Aspergillus nidulans
NNNNRHDDN
NHHDYNNNN		 PBM
Weirauch et al.(2014)
pTH8216 		0.991 0.405
ENSPPYG00000004736
M01685_2.00 		Pongo abelii
NNNNDWWW
WWWHNNNN		 PBM
Weirauch et al.(2014)
pTH9279 		0.991 0.395
Hmga2
M00751_2.00 		Mus musculus
NNNNRHWWNN
NNWWDYNNNN		 PBM
Weirauch et al.(2013)
pTH3046 		0.991 0.385
HMGA2
M09771_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HMGA2_01 		0.991 0.385
BRADI5G22430
M01674_2.00 		Brachypodium distachyon
VNRDDDHDD
HHDHHHYNB		 PBM
Weirauch et al.(2014)
pTH9242 		0.991 0.346
FGRRES_05233
M01104_2.00 		Fusarium graminearum
NNNDWWAWWH
DWWTWWHNNN		 PBM
Lambert et al.(2019)
pTH11377 		0.991 0.333
Setbp1
M01683_2.00 		Mus musculus
NDNNNNNNHN
NDNNNNNNHN		 PBM
Weirauch et al.(2014)
pTH1294 		0.991 0.308
Ahctf1
M00750_2.00 		Mus musculus
AAAWAWAW
ATWTWTTT		 PBM
Weirauch et al.(2013)
pTH2361 		0.991 0.308
Xrp1
M01686_2.00 		Drosophila melanogaster
NNNNDWAWW
WWTWHNNNN		 PBM
Weirauch et al.(2014)
pTH9260 		0.991 0.308
PK26376.1
M01108_2.00 		Cannabis sativa
DDWWWAWW
WWTWWWHH		 PBM
Lambert et al.(2019)
pTH11261 		0.991 0.308
Xrp1
M05900_2.00 		Drosophila melanogaster
RTKRYGYAAT
ATTRCRYMAY		 B1H
Zhu et al.(2011)
Xrp1_CG6272_SANGER_5_FBgn0261113 		0.991 0.308
NCU05635
M01694_2.00 		Neurospora crassa
NNNWWWWNNN
NNNWWWWNNN		 PBM
Weirauch et al.(2014)
pTH8863 		0.991 0.289
ATEG_07399
M01676_2.00 		Aspergillus terreus
DHNNHNDWWW
WWWHNDNNDH		 PBM
Weirauch et al.(2014)
pTH9237 		0.991 0.269
ENSACAG00000014978
M01677_2.00 		Anolis carolinensis
NNNNNDRH
DYHNNNNN		 PBM
Weirauch et al.(2014)
pTH9222 		0.991 0.269
phf21ab
M01678_2.00 		Danio rerio
NNNDNADW
WHTNHNNN		 PBM
Weirauch et al.(2014)
pTH9254 		0.991 0.269
kmt2cb
M01679_2.00 		Danio rerio
WWAWAWAT
ATWTWTWW		 PBM
Weirauch et al.(2014)
pTH7876 		0.991 0.269
phf21ab
M01680_2.00 		Gasterosteus aculeatus
AAAAWAAA
TTTWTTTT		 PBM
Weirauch et al.(2014)
pTH9180 		0.991 0.269
PHF21A
M01681_2.00 		Meleagris gallopavo
HDNHNNDNHD
HDNHNNDNHD		 PBM
Weirauch et al.(2014)
pTH7875 		0.991 0.269
PHF21A
M01103_2.00 		Monodelphis domestica
NNNAWATWAATN
NATTWATWTNNN		 PBM
Lambert et al.(2019)
pTH9309 		0.991 0.269
PHF21A
M01682_2.00 		Monodelphis domestica
NNNNNHRH
DYDNNNNN		 PBM
Weirauch et al.(2014)
pTH9335 		0.991 0.269
Phf21a
M01684_2.00 		Mus musculus
NNNATATWAATN
NATTWATATNNN		 PBM
Weirauch et al.(2014)
pTH8550 		0.991 0.269
HMGA
M01671_2.00 		Arabidopsis thaliana
NNNNDWAWH
DWTWHNNNN		 PBM
Weirauch et al.(2014)
pTH7395 		0.991 0.250
HMG-I Y
M02652_2.00 		Pisum sativum
NDWVAAANRVMRWMAY
RTKWYKBYNTTTBWHN		 SELEX
Mathelier et al.(2014)
MA0045.1 		0.991 0.250
estExt_fgeneshNG_pg.C_820014
M01692_2.00 		Naegleria gruberi
NNNNNDRH
DYHNNNNN		 PBM
Weirauch et al.(2014)
pTH9380 		0.991 0.231
NCU01145
M01693_2.00 		Neurospora crassa
RWATAWWTNN
NNAWWTATWY		 PBM
Weirauch et al.(2014)
pTH8916 		0.991 0.226
athp-3
M01691_2.00 		Caenorhabditis elegans
NNDDWDH
DHWHHNN		 PBM
Weirauch et al.(2014)
pTH9097 		0.991 0.210
hmg-12
M01690_2.00 		Caenorhabditis elegans
NNAWWTAWWTNN
NNAWWTAWWTNN		 PBM
Weirauch et al.(2014)
pTH8997 		0.991 0.148
SUM1
M01517_2.00 		Saccharomyces cerevisiae
NNNDWAWW
WWTWHNNN		 PBM
Zhu et al.(2009)
Sum1 		0.991 0.038
For this family, TFs with SR scores > 0.990 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_6DL_EE9625E89.1 AT hook 58 70
Traes_6DL_EE9625E89.1 AT hook 119 131

Links

Other AT hook family TFs
Other Triticum aestivum TFs

1072 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00039p00172240 Amborella trichopoda AMTR_s00039p00172240 I
Aquca_002_00902 Aquilegia coerulea Aquca_002_00902 I
Aquca_025_00059 Aquilegia coerulea Aquca_025_00059 I
MYB305 Arabidopsis thaliana AT3G24310 I
ATMYB121 Arabidopsis thaliana AT3G30210 D
AtMYB79 Arabidopsis thaliana AT4G13480 I
BGIOSGA004072 Oryza indica BGIOSGA004072 I
BGIOSGA006030 Oryza indica BGIOSGA006030 I
BGIOSGA011479 Oryza indica BGIOSGA011479 I
BGIOSGA014750 Oryza indica BGIOSGA014750 I
Bo1g098860 Brassica oleracea Bo1g098860 I
Bo2g057760 Brassica oleracea Bo2g057760 I
Bo3g083130 Brassica oleracea Bo3g083130 I
Bo7g033260 Brassica oleracea Bo7g033260 I
Bo7g088650 Brassica oleracea Bo7g088650 I
Bo9g009020 Brassica oleracea Bo9g009020 I
Bostr.0556s0619 Boechera stricta Bostr.0556s0619 I
Bostr.19424s0195 Boechera stricta Bostr.19424s0195 I
Bostr.2021s0106 Boechera stricta Bostr.2021s0106 I
Bra001941 Brassica rapa Bra001941 I
Bra015029 Brassica rapa Bra015029 I
Bra020744 Brassica rapa Bra020744 I
Bra025410 Brassica rapa Bra025410 I
Bra028369 Brassica rapa Bra028369 I
Bra033948 Brassica rapa Bra033948 I
BRADI2G38560 Brachypodium distachyon BRADI2G38560 I
BRADI2G44770 Brachypodium distachyon BRADI2G44770 I
Cagra.0454s0003 Capsella grandiflora Cagra.0454s0003 I
Cagra.1138s0003 Capsella grandiflora Cagra.1138s0003 I
Cagra.15509s0001 Capsella grandiflora Cagra.15509s0001 I
Carubv10007255m.g Capsella rubella Carubv10007255m.g I
Carubv10014367m.g Capsella rubella Carubv10014367m.g I
Carubv10018530m.g Capsella rubella Carubv10018530m.g I
cassava24389.valid.m1 Manihot esculenta cassava24389.valid.m1 I
cassava24463.valid.m1 Manihot esculenta cassava24463.valid.m1 I
cassava9891.m1 Manihot esculenta cassava9891.m1 I
Ca_07872 Cicer arietinum Ca_07872 I
Ca_20437 Cicer arietinum Ca_20437 I
chr1.CM0163.50.nc Lotus japonicus chr1.CM0163.50.nc I
Ciclev10006914m.g Citrus clementina Ciclev10006914m.g I
Ciclev10015986m.g Citrus clementina Ciclev10015986m.g I
Cla007745 Citrullus lanatus Cla007745 I
Cla016762 Citrullus lanatus Cla016762 I
Cla017610 Citrullus lanatus Cla017610 I
Cla021798 Citrullus lanatus Cla021798 I
Cucsa.238540 Cucumis sativus Cucsa.238540 I
Cucsa.255900 Cucumis sativus Cucsa.255900 I
Cucsa.383230 Cucumis sativus Cucsa.383230 I
Eucgr.H02896 Eucalyptus grandis Eucgr.H02896 I
Eucgr.I02057 Eucalyptus grandis Eucgr.I02057 I
evm.TU.supercontig_59.23 Carica papaya evm.TU.supercontig_59.23 I
F775_06959 Aegilops tauschii F775_06959 I
F775_23572 Aegilops tauschii F775_23572 I
F775_32337 Aegilops tauschii F775_32337 N
fgenesh2_kg.3__2645__AT3G24310.1 Arabidopsis lyrata fgenesh2_kg.3__2645__AT3G24310.1 I
ATMYB121 Arabidopsis lyrata fgenesh2_kg.5__710__AT3G30210.1 I
fgenesh2_kg.9__1__AT4G13480.1 Arabidopsis lyrata fgenesh2_kg.9__1__AT4G13480.1 I
gene28293-v1.0-hybrid Fragaria vesca gene28293-v1.0-hybrid I
GLYMA04G26650 Glycine max GLYMA04G26650 I
GLYMA06G38340 Glycine max GLYMA06G38340 I
GLYMA10G26681 Glycine max GLYMA10G26681 I
GLYMA10G33450 Glycine max GLYMA10G33450 I
GLYMA15G14190 Glycine max GLYMA15G14190 I
GLYMA17G17560 Glycine max GLYMA17G17560 I
GLYMA18G50881 Glycine max GLYMA18G50881 I
GLYMA20G20980 Glycine max GLYMA20G20980 I
GLYMA20G34140 Glycine max GLYMA20G34140 I
Gorai.001G090100 Gossypium raimondii Gorai.001G090100 I
Gorai.001G143200 Gossypium raimondii Gorai.001G143200 I
Gorai.001G207500 Gossypium raimondii Gorai.001G207500 I
Gorai.004G146000 Gossypium raimondii Gorai.004G146000 I
Gorai.005G054900 Gossypium raimondii Gorai.005G054900 I
Gorai.006G060300 Gossypium raimondii Gorai.006G060300 I
Gorai.006G073500 Gossypium raimondii Gorai.006G073500 I
Gorai.006G254200 Gossypium raimondii Gorai.006G254200 I
Gorai.007G312400 Gossypium raimondii Gorai.007G312400 I
GRMZM2G027697 Zea mays GRMZM2G027697 I
GRMZM2G043792 Zea mays GRMZM2G043792 I
GRMZM2G089686 Zea mays GRMZM2G089686 I
GRMZM2G143328 Zea mays GRMZM2G143328 I
GSMUA_Achr11G02410_001 Musa acuminata GSMUA_Achr11G02410_001 I
GSMUA_Achr11G17190_001 Musa acuminata GSMUA_Achr11G17190_001 I
GSMUA_Achr1G03450_001 Musa acuminata GSMUA_Achr1G03450_001 I
GSMUA_Achr3G12730_001 Musa acuminata GSMUA_Achr3G12730_001 I
LPERR01G20550 Leersia perrieri LPERR01G20550 I
LPERR04G14700 Leersia perrieri LPERR04G14700 I
Lus10014453.g Linum usitatissimum Lus10014453.g I
Lus10023711.g Linum usitatissimum Lus10023711.g I
Lus10034372.g Linum usitatissimum Lus10034372.g I
MDP0000133412 Malus domestica MDP0000133412 I
MDP0000183451 Malus domestica MDP0000183451 I
mgf002201m Mimulus guttatus mgf002201m I
mgf004640m Mimulus guttatus mgf004640m I
MLOC_5568 Hordeum vulgare MLOC_5568 I
MLOC_6786 Hordeum vulgare MLOC_6786 I
MLOC_9927 Hordeum vulgare MLOC_9927 I
MTR_1g045610 Medicago truncatula MTR_1g045610 I
MTR_1g073170 Medicago truncatula MTR_1g073170 I
OB01G33330 Oryza brachyantha OB01G33330 I
OB02G31640 Oryza brachyantha OB02G31640 I
OB03G13340 Oryza brachyantha OB03G13340 I
OB04G25360 Oryza brachyantha OB04G25360 I
OBART01G24030 Oryza barthii OBART01G24030 I
OBART02G24300 Oryza barthii OBART02G24300 I
OGLUM01G27780 Oryza glumaepatula OGLUM01G27780 I
OGLUM02G24660 Oryza glumaepatula OGLUM02G24660 I
OMERI01G22060 Oryza meridionalis OMERI01G22060 I
OMERI02G23750 Oryza meridionalis OMERI02G23750 I
ONIVA01G27030 Oryza nivara ONIVA01G27030 I
ONIVA09G12460 Oryza nivara ONIVA09G12460 I
OPUNC01G24010 Oryza punctata OPUNC01G24010 I
OPUNC02G22200 Oryza punctata OPUNC02G22200 I
orange1.1g021188m.g Citrus sinensis orange1.1g021188m.g I
orange1.1g047839m.g Citrus sinensis orange1.1g047839m.g I
ORGLA01G0193500 Oryza glaberrima ORGLA01G0193500 I
ORGLA02G0210000 Oryza glaberrima ORGLA02G0210000 I
ORGLA03G0030900 Oryza glaberrima ORGLA03G0030900 I
ORGLA04G0153500 Oryza glaberrima ORGLA04G0153500 I
ORUFI01G26910 Oryza rufipogon ORUFI01G26910 I
ORUFI02G25650 Oryza rufipogon ORUFI02G25650 I
ORUFI03G03040 Oryza rufipogon ORUFI03G03040 I
ORUFI04G19690 Oryza rufipogon ORUFI04G19690 I
OS01G0637800 Oryza sativa OS01G0637800 I
OS02G0618400 Oryza sativa OS02G0618400 I
OS03G0142600 Oryza sativa OS03G0142600 I
OS04G0508500 Oryza sativa OS04G0508500 I
Pavir.Aa01294 Panicum virgatum Pavir.Aa01294 I
Pavir.Ea00964 Panicum virgatum Pavir.Ea00964 I
Pavir.Eb01664 Panicum virgatum Pavir.Eb01664 N
Pavir.Ga01308 Panicum virgatum Pavir.Ga01308 I
Pavir.Ia04415 Panicum virgatum Pavir.Ia04415 I
Pavir.Ib00221 Panicum virgatum Pavir.Ib00221 I
Pavir.J35999 Panicum virgatum Pavir.J35999 I
Pavir.J37992 Panicum virgatum Pavir.J37992 I
PGSC0003DMG400001376 Solanum tuberosum PGSC0003DMG400001376 I
PGSC0003DMG400001504 Solanum tuberosum PGSC0003DMG400001504 I
PGSC0003DMG400027202 Solanum tuberosum PGSC0003DMG400027202 I
Pm009050 Prunus mume Pm009050 I
Pm015392 Prunus mume Pm015392 I
POPTR_0004s11720 Populus trichocarpa POPTR_0004s11720 I
POPTR_0008s17350 Populus trichocarpa POPTR_0008s17350 I
POPTR_0010s07450 Populus trichocarpa POPTR_0010s07450 I
PRUPE_ppa016385mg Prunus persica PRUPE_ppa016385mg I
PRUPE_ppa017942mg Prunus persica PRUPE_ppa017942mg I
PRUPE_ppa024234mg Prunus persica PRUPE_ppa024234mg I
SapurV1A.0021s0310 Salix purpurea SapurV1A.0021s0310 I
SapurV1A.0096s0360 Salix purpurea SapurV1A.0096s0360 I
Sb01g047450 Sorghum bicolor Sb01g047450 I
Sb03g029050 Sorghum bicolor Sb03g029050 I
Sb04g026210 Sorghum bicolor Sb04g026210 I
Si002446m.g Setaria italica Si002446m.g I
Si003965m.g Setaria italica Si003965m.g I
Si010822m.g Setaria italica Si010822m.g I
Si018007m.g Setaria italica Si018007m.g I
Si037281m.g Setaria italica Si037281m.g I
Solyc02g089190.1 Solanum lycopersicum Solyc02g089190.1 I
Solyc05g053150.1 Solanum lycopersicum Solyc05g053150.1 I
Solyc09g090790.2 Solanum lycopersicum Solyc09g090790.2 I
TCM_018971 Theobroma cacao TCM_018971 I
TCM_021037 Theobroma cacao TCM_021037 I
Thhalv10002634m.g Eutrema salsugineum Thhalv10002634m.g I
TRAES3BF026200120CFD_g Triticum aestivum TRAES3BF026200120CFD_g I
Traes_2AL_605C25CDF Triticum aestivum Traes_2AL_605C25CDF I
Traes_4DL_14C563681 Triticum aestivum Traes_4DL_14C563681 N
Traes_6AL_89BA7115C Triticum aestivum Traes_6AL_89BA7115C I
Traes_6BL_8E4A831B6 Triticum aestivum Traes_6BL_8E4A831B6 I
Traes_6DL_FDFCBA57D Triticum aestivum Traes_6DL_FDFCBA57D I
Traes_6DL_FDFCBA57D1 Triticum aestivum Traes_6DL_FDFCBA57D1 I
TRIUR3_18020 Triticum urartu TRIUR3_18020 I
TRIUR3_25064 Triticum urartu TRIUR3_25064 I
TRIUR3_31527 Triticum urartu TRIUR3_31527 I
VIT_05s0049g02260 Vitis vinifera VIT_05s0049g02260 I