CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MLOC_9927
(
Hordeum vulgare
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
MLOC_9927
T274609_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ATMYB121
M07091_2.00
Arabidopsis thaliana
NYNWACCTAMYHHH
DDDRKTAGGTWNRN
Dap-seq
OMalley et al.(2016)
MYB121_col_a
0.670
0.731
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MLOC_9927.1
Myb
17
64
KGPWTALEDRLLTEYVQQQGEGSWNSVAKLTGLRRSGKSCRLRWVNYL
MLOC_9927.1
Myb
70
101
RGKITPDEESVILHLHAMLGNRCGRRSRGACR
MLOC_9927.2
Myb
17
64
KGPWTALEDRLLTEYVQQQGEGSWNSVAKLTGLRRSGKSCRLRWVNYL
MLOC_9927.2
Myb
70
115
RGKITPDEESVILHLHAMLGNRWSAIARCLPGRTDNEIKNYWRTHF
Links
Other
Myb/SANT
family TFs
Other
Hordeum vulgare
TFs
176 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA011479
Oryza indica
BGIOSGA011479
I
0.900
GRMZM2G054111
Zea mays
GRMZM2G054111
I
0.900
OB03G13340
Oryza brachyantha
OB03G13340
I
0.900
ORGLA03G0030900
Oryza glaberrima
ORGLA03G0030900
I
0.900
ORUFI03G03040
Oryza rufipogon
ORUFI03G03040
I
0.900
OS03G0142600
Oryza sativa
OS03G0142600
I
0.900
Sb01g047450
Sorghum bicolor
Sb01g047450
I
0.900
Si037281m.g
Setaria italica
Si037281m.g
I
0.900
Pavir.Ia04415
Panicum virgatum
Pavir.Ia04415
I
0.900
Pavir.Ib00221
Panicum virgatum
Pavir.Ib00221
I
0.896
F775_32337
Aegilops tauschii
F775_32337
N
0.883
Traes_4DL_14C563681
Triticum aestivum
Traes_4DL_14C563681
N
0.883
GRMZM2G089686
Zea mays
GRMZM2G089686
I
0.852
GRMZM2G043792
Zea mays
GRMZM2G043792
I
0.834
GRMZM2G027697
Zea mays
GRMZM2G027697
I
0.804
OGLUM02G24660
Oryza glumaepatula
OGLUM02G24660
I
0.804
Sb04g026210
Sorghum bicolor
Sb04g026210
I
0.804
Si018007m.g
Setaria italica
Si018007m.g
I
0.804
Traes_6BL_8E4A831B6
Triticum aestivum
Traes_6BL_8E4A831B6
I
0.804
Pavir.Aa01294
Panicum virgatum
Pavir.Aa01294
I
0.804
Pavir.J37992
Panicum virgatum
Pavir.J37992
I
0.804
BGIOSGA006030
Oryza indica
BGIOSGA006030
I
0.795
MLOC_6786
Hordeum vulgare
MLOC_6786
I
0.795
OB02G31640
Oryza brachyantha
OB02G31640
I
0.795
OBART02G24300
Oryza barthii
OBART02G24300
I
0.795
OMERI02G23750
Oryza meridionalis
OMERI02G23750
I
0.795
ONIVA09G12460
Oryza nivara
ONIVA09G12460
I
0.795
OPUNC02G22200
Oryza punctata
OPUNC02G22200
I
0.795
ORGLA02G0210000
Oryza glaberrima
ORGLA02G0210000
I
0.795
ORUFI02G25650
Oryza rufipogon
ORUFI02G25650
I
0.795
OS02G0618400
Oryza sativa
OS02G0618400
I
0.795
F775_23572
Aegilops tauschii
F775_23572
I
0.760
Traes_6DL_FDFCBA57D1
Triticum aestivum
Traes_6DL_FDFCBA57D1
I
0.760
Traes_6DL_FDFCBA57D
Triticum aestivum
Traes_6DL_FDFCBA57D
I
0.760
Eucgr.H02896
Eucalyptus grandis
Eucgr.H02896
I
0.754
Traes_6AL_89BA7115C
Triticum aestivum
Traes_6AL_89BA7115C
I
0.751
TRIUR3_31527
Triticum urartu
TRIUR3_31527
I
0.751
Cla007745
Citrullus lanatus
Cla007745
I
0.739
Cucsa.383230
Cucumis sativus
Cucsa.383230
I
0.739
Ciclev10006914m.g
Citrus clementina
Ciclev10006914m.g
I
0.739
orange1.1g047839m.g
Citrus sinensis
orange1.1g047839m.g
I
0.739
MTR_1g045610
Medicago truncatula
MTR_1g045610
I
0.738
Gorai.006G073500
Gossypium raimondii
Gorai.006G073500
I
0.737
AtMYB79
Arabidopsis thaliana
AT4G13480
I
0.733
BGIOSGA014750
Oryza indica
BGIOSGA014750
I
0.733
GLYMA10G26681
Glycine max
GLYMA10G26681
I
0.733
GLYMA17G17560
Glycine max
GLYMA17G17560
I
0.733
LPERR04G14700
Leersia perrieri
LPERR04G14700
I
0.733
OB04G25360
Oryza brachyantha
OB04G25360
I
0.733
ORGLA04G0153500
Oryza glaberrima
ORGLA04G0153500
I
0.733
ORUFI04G19690
Oryza rufipogon
ORUFI04G19690
I
0.733
OS04G0508500
Oryza sativa
OS04G0508500
I
0.733
TCM_021037
Theobroma cacao
TCM_021037
I
0.733
VIT_05s0049g02260
Vitis vinifera
VIT_05s0049g02260
I
0.733
Cla021798
Citrullus lanatus
Cla021798
I
0.733
cassava24389.valid.m1
Manihot esculenta
cassava24389.valid.m1
I
0.733
Cucsa.255900
Cucumis sativus
Cucsa.255900
I
0.733
Bostr.2021s0106
Boechera stricta
Bostr.2021s0106
I
0.733
Pavir.Ga01308
Panicum virgatum
Pavir.Ga01308
I
0.733
SapurV1A.0096s0360
Salix purpurea
SapurV1A.0096s0360
I
0.733
PRUPE_ppa017942mg
Prunus persica
PRUPE_ppa017942mg
I
0.730
Cagra.15509s0001
Capsella grandiflora
Cagra.15509s0001
I
0.730
Carubv10007255m.g
Capsella rubella
Carubv10007255m.g
I
0.730
Bo7g033260
Brassica oleracea
Bo7g033260
I
0.729
Bra015029
Brassica rapa
Bra015029
I
0.729
Traes_4BL_F7B9CBA99
Triticum aestivum
Traes_4BL_F7B9CBA99
N
0.729
Gorai.006G254200
Gossypium raimondii
Gorai.006G254200
I
0.729
PRUPE_ppa024234mg
Prunus persica
PRUPE_ppa024234mg
I
0.727
GSMUA_Achr1G03450_001
Musa acuminata
GSMUA_Achr1G03450_001
I
0.725
MYB305
Arabidopsis thaliana
AT3G24310
I
0.724
Bo1g098860
Brassica oleracea
Bo1g098860
I
0.724
Bo3g083130
Brassica oleracea
Bo3g083130
I
0.724
Bra001941
Brassica rapa
Bra001941
I
0.724
Bra028369
Brassica rapa
Bra028369
I
0.724
fgenesh2_kg.3__2645__AT3G24310.1
Arabidopsis lyrata
fgenesh2_kg.3__2645__AT3G24310.1
I
0.724
Si010822m.g
Setaria italica
Si010822m.g
I
0.724
Pm009050
Prunus mume
Pm009050
I
0.724
Bostr.19424s0195
Boechera stricta
Bostr.19424s0195
I
0.724
Carubv10014367m.g
Capsella rubella
Carubv10014367m.g
I
0.724
evm.TU.supercontig_59.23
Carica papaya
evm.TU.supercontig_59.23
I
0.724
Thhalv10002634m.g
Eutrema salsugineum
Thhalv10002634m.g
I
0.724
F775_06959
Aegilops tauschii
F775_06959
I
0.723
fgenesh2_kg.9__1__AT4G13480.1
Arabidopsis lyrata
fgenesh2_kg.9__1__AT4G13480.1
I
0.723
Traes_2AL_605C25CDF
Triticum aestivum
Traes_2AL_605C25CDF
I
0.723
TRIUR3_18020
Triticum urartu
TRIUR3_18020
I
0.723
POPTR_0010s07450
Populus trichocarpa
POPTR_0010s07450
I
0.721
Ca_20437
Cicer arietinum
Ca_20437
I
0.721
Gorai.005G054900
Gossypium raimondii
Gorai.005G054900
I
0.721
MDP0000133412
Malus domestica
MDP0000133412
I
0.721
MDP0000183451
Malus domestica
MDP0000183451
I
0.721
BGIOSGA004072
Oryza indica
BGIOSGA004072
I
0.718
OB01G33330
Oryza brachyantha
OB01G33330
I
0.718
OBART01G24030
Oryza barthii
OBART01G24030
I
0.718
OGLUM01G27780
Oryza glumaepatula
OGLUM01G27780
I
0.718
OMERI01G22060
Oryza meridionalis
OMERI01G22060
I
0.718
ONIVA01G27030
Oryza nivara
ONIVA01G27030
I
0.718
OPUNC01G24010
Oryza punctata
OPUNC01G24010
I
0.718
ORGLA01G0193500
Oryza glaberrima
ORGLA01G0193500
I
0.718
ORUFI01G26910
Oryza rufipogon
ORUFI01G26910
I
0.718
OS01G0637800
Oryza sativa
OS01G0637800
I
0.718
PGSC0003DMG400001504
Solanum tuberosum
PGSC0003DMG400001504
I
0.718
Solyc09g090790.2
Solanum lycopersicum
Solyc09g090790.2
I
0.718
GLYMA20G20980
Glycine max
GLYMA20G20980
I
0.716
gene28293-v1.0-hybrid
Fragaria vesca
gene28293-v1.0-hybrid
I
0.716
mgf004640m
Mimulus guttatus
mgf004640m
I
0.715
cassava24463.valid.m1
Manihot esculenta
cassava24463.valid.m1
I
0.712
Si003965m.g
Setaria italica
Si003965m.g
I
0.710
Lus10023711.g
Linum usitatissimum
Lus10023711.g
I
0.710
Cagra.0454s0003
Capsella grandiflora
Cagra.0454s0003
I
0.707
GLYMA04G26650
Glycine max
GLYMA04G26650
I
0.706
GLYMA06G38340
Glycine max
GLYMA06G38340
I
0.706
GLYMA10G33450
Glycine max
GLYMA10G33450
I
0.703
GLYMA20G34140
Glycine max
GLYMA20G34140
I
0.703
Ca_07872
Cicer arietinum
Ca_07872
I
0.702
BRADI2G44770
Brachypodium distachyon
BRADI2G44770
I
0.700
MLOC_5568
Hordeum vulgare
MLOC_5568
I
0.700
Solyc05g053150.1
Solanum lycopersicum
Solyc05g053150.1
I
0.698
Aquca_025_00059
Aquilegia coerulea
Aquca_025_00059
I
0.697
mgf002201m
Mimulus guttatus
mgf002201m
I
0.696
chr1.CM0163.50.nc
Lotus japonicus
chr1.CM0163.50.nc
I
0.696
PGSC0003DMG400027202
Solanum tuberosum
PGSC0003DMG400027202
I
0.695
SapurV1A.0021s0310
Salix purpurea
SapurV1A.0021s0310
I
0.695
TRAES3BF026200120CFD_g
Triticum aestivum
TRAES3BF026200120CFD_g
I
0.693
GLYMA15G14190
Glycine max
GLYMA15G14190
I
0.689
GRMZM2G143328
Zea mays
GRMZM2G143328
I
0.688
Sb03g029050
Sorghum bicolor
Sb03g029050
I
0.688
Aquca_002_00902
Aquilegia coerulea
Aquca_002_00902
I
0.687
BRADI2G38560
Brachypodium distachyon
BRADI2G38560
I
0.685
GSMUA_Achr11G02410_001
Musa acuminata
GSMUA_Achr11G02410_001
I
0.685
Ciclev10015986m.g
Citrus clementina
Ciclev10015986m.g
I
0.685
orange1.1g021188m.g
Citrus sinensis
orange1.1g021188m.g
I
0.685
Pavir.J35999
Panicum virgatum
Pavir.J35999
I
0.685
Lus10014453.g
Linum usitatissimum
Lus10014453.g
I
0.684
AMTR_s00039p00172240
Amborella trichopoda
AMTR_s00039p00172240
I
0.683
Cucsa.238540
Cucumis sativus
Cucsa.238540
I
0.683
Gorai.006G060300
Gossypium raimondii
Gorai.006G060300
I
0.682
GSMUA_Achr11G17190_001
Musa acuminata
GSMUA_Achr11G17190_001
I
0.680
MTR_1g073170
Medicago truncatula
MTR_1g073170
I
0.680
POPTR_0008s17350
Populus trichocarpa
POPTR_0008s17350
I
0.679
Gorai.001G143200
Gossypium raimondii
Gorai.001G143200
I
0.678
Gorai.004G146000
Gossypium raimondii
Gorai.004G146000
I
0.677
Bo2g057760
Brassica oleracea
Bo2g057760
I
0.676
Bra033948
Brassica rapa
Bra033948
I
0.676
TCM_018971
Theobroma cacao
TCM_018971
I
0.676
PRUPE_ppa016385mg
Prunus persica
PRUPE_ppa016385mg
I
0.675
LPERR01G20550
Leersia perrieri
LPERR01G20550
I
0.674
Bra020744
Brassica rapa
Bra020744
I
0.673
cassava9891.m1
Manihot esculenta
cassava9891.m1
I
0.673
Gorai.007G312400
Gossypium raimondii
Gorai.007G312400
I
0.673
Cla016762
Citrullus lanatus
Cla016762
I
0.672
Pavir.Eb01664
Panicum virgatum
Pavir.Eb01664
N
0.672
Pm015392
Prunus mume
Pm015392
I
0.671
ATMYB121
Arabidopsis thaliana
AT3G30210
D
0.670
Bo7g088650
Brassica oleracea
Bo7g088650
I
0.670
Bo9g009020
Brassica oleracea
Bo9g009020
I
0.670
Bra025410
Brassica rapa
Bra025410
I
0.670
ATMYB121
Arabidopsis lyrata
fgenesh2_kg.5__710__AT3G30210.1
I
0.670
Bostr.0556s0619
Boechera stricta
Bostr.0556s0619
I
0.670
Cagra.1138s0003
Capsella grandiflora
Cagra.1138s0003
I
0.670
Carubv10018530m.g
Capsella rubella
Carubv10018530m.g
I
0.670
Gorai.001G090100
Gossypium raimondii
Gorai.001G090100
I
0.670
POPTR_0004s11720
Populus trichocarpa
POPTR_0004s11720
I
0.668
Eucgr.I02057
Eucalyptus grandis
Eucgr.I02057
I
0.668
PGSC0003DMG400001376
Solanum tuberosum
PGSC0003DMG400001376
I
0.667
Solyc02g089190.1
Solanum lycopersicum
Solyc02g089190.1
I
0.667
GLYMA18G50881
Glycine max
GLYMA18G50881
I
0.666
Gorai.001G207500
Gossypium raimondii
Gorai.001G207500
I
0.666
Cla017610
Citrullus lanatus
Cla017610
I
0.665
GSMUA_Achr3G12730_001
Musa acuminata
GSMUA_Achr3G12730_001
I
0.664
evm.TU.supercontig_107.48
Carica papaya
evm.TU.supercontig_107.48
I
0.664
TRIUR3_25064
Triticum urartu
TRIUR3_25064
I
0.663
Thhalv10026896m.g
Eutrema salsugineum
Thhalv10026896m.g
I
0.663
Si002446m.g
Setaria italica
Si002446m.g
I
0.662
Lus10034372.g
Linum usitatissimum
Lus10034372.g
I
0.662
Pavir.Ea00964
Panicum virgatum
Pavir.Ea00964
I
0.662