CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HES1
(
Callithrix jacchus
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSCJAG00000014044
T033354_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hes1
M01726_2.00
Mus musculus
NVCACGYKNN
NNMRCGTGBN
PBM
Weirauch et al.(2014)
pTH5059
0.914
1.000
HES1
M04090_2.00
Homo sapiens
VVCACGYGHM
KDCRCGTGBB
SELEX
Yin et al.(2017)
HES1_eDBD_HT-SELEX
0.914
1.000
HES1
M09822_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HES1_Q2
0.914
1.000
HES1
M09823_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HES1_Q3
0.914
1.000
HES1
M09824_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HES1_Q4
0.914
1.000
HES1
M09825_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HES1_Q6
0.914
1.000
HES1
M04091_2.00
Homo sapiens
VNYACNYNHN
NDNRNGTRNB
SELEX
Yin et al.(2017)
HES1_eDBD_Methyl-HT-SELEX
0.914
1.000
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCJAP00000025821
bHLH
35
92
RKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ
ENSCJAP00000025826
bHLH
35
92
RKSSKPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQ
Links
Other
bHLH
family TFs
Other
Callithrix jacchus
TFs
113 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA035743
Oryza indica
BGIOSGA035743
N
0.000
BRADI4G09190
Brachypodium distachyon
BRADI4G09190
N
0.000
F775_08284
Aegilops tauschii
F775_08284
N
0.000
F775_08285
Aegilops tauschii
F775_08285
N
0.000
GRMZM2G073823
Zea mays
GRMZM2G073823
N
0.000
LPERR11G20420
Leersia perrieri
LPERR11G20420
N
0.000
MLOC_5548
Hordeum vulgare
MLOC_5548
N
0.000
MLOC_7746
Hordeum vulgare
MLOC_7746
N
0.000
OB11G28100
Oryza brachyantha
OB11G28100
N
0.000
OBART11G23680
Oryza barthii
OBART11G23680
N
0.000
OGLUM11G22840
Oryza glumaepatula
OGLUM11G22840
N
0.000
ONIVA11G23200
Oryza nivara
ONIVA11G23200
N
0.000
ORGLA11G0190400
Oryza glaberrima
ORGLA11G0190400
N
0.000
ORUFI11G25560
Oryza rufipogon
ORUFI11G25560
N
0.000
OS11G0705900
Oryza sativa
OS11G0705900
N
0.000
Pavir.Ha00317
Panicum virgatum
Pavir.Ha00317
N
0.000
Pavir.Hb00044
Panicum virgatum
Pavir.Hb00044
N
0.000
Pavir.J31658
Panicum virgatum
Pavir.J31658
N
0.000
Pavir.J39141
Panicum virgatum
Pavir.J39141
N
0.000
Sb05g027785
Sorghum bicolor
Sb05g027785
N
0.000
Si026116m.g
Setaria italica
Si026116m.g
N
0.000
Traes_4AL_977AF4963
Triticum aestivum
Traes_4AL_977AF4963
N
0.000
Traes_4AL_B2CACD56E
Triticum aestivum
Traes_4AL_B2CACD56E
N
0.000
Traes_4AL_E769BB5A6
Triticum aestivum
Traes_4AL_E769BB5A6
N
0.000
Traes_4BS_2EA81743E1
Triticum aestivum
Traes_4BS_2EA81743E1
N
0.000
Traes_4BS_344A932261
Triticum aestivum
Traes_4BS_344A932261
N
0.000
Traes_4DS_050789E2A
Triticum aestivum
Traes_4DS_050789E2A
N
0.000
Traes_4DS_A5CD70F30
Triticum aestivum
Traes_4DS_A5CD70F30
N
0.000
Traes_4DS_C7C37A73D
Triticum aestivum
Traes_4DS_C7C37A73D
N
0.000
Traes_5AL_1A7387EDC
Triticum aestivum
Traes_5AL_1A7387EDC
N
0.000
TRIUR3_21533
Triticum urartu
TRIUR3_21533
N
0.000