MSGN1 (Equus caballus)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSECAG00000002724 T033917_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MSGN1
M04144_2.00 		Homo sapiens
NVMCAWWTGGYN
NRCCAWWTGKBN		 SELEX
Yin et al.(2017)
MSGN1_eDBD_HT-SELEX 		0.914 1.000
Msgn1
M08772_2.00 		Mus musculus
NNRMCAAATGGY
RCCATTTGKYNN		 Misc
Kulakovskiy et al.(2013)
MSGN1_MOUSE.H11MO.0.C 		0.914 1.000
MSGN1
M04145_2.00 		Homo sapiens
NRMCAWWTGSYN
NRSCAWWTGKYN		 SELEX
Yin et al.(2017)
MSGN1_eDBD_Methyl-HT-SELEX 		0.914 1.000
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSECAP00000001823 bHLH 125 179

Links

Other bHLH family TFs
Other Equus caballus TFs

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
DREB1C Oryza indica BGIOSGA022219 N
BRADI1G49560 Brachypodium distachyon BRADI1G49560 I
BRADI1G49570 Brachypodium distachyon BRADI1G49570 I
BRADI4G35630 Brachypodium distachyon BRADI4G35630 I
GRMZM2G069082 Zea mays GRMZM2G069082 I
GRMZM2G124037 Zea mays GRMZM2G124037 I
GRMZM2G380377 Zea mays GRMZM2G380377 N
GSMUA_Achr4G19660_001 Musa acuminata GSMUA_Achr4G19660_001 I
GSMUA_Achr7G05900_001 Musa acuminata GSMUA_Achr7G05900_001 I
LPERR06G01360 Leersia perrieri LPERR06G01360 N
OMERI06G01670 Oryza meridionalis OMERI06G01670 N
ONIVA06G01850 Oryza nivara ONIVA06G01850 N
OPUNC06G01430 Oryza punctata OPUNC06G01430 N
ORUFI06G01550 Oryza rufipogon ORUFI06G01550 N
DREB1C Oryza sativa OS06G0127100 N
Pavir.J35991 Panicum virgatum Pavir.J35991 N
Q8GZQ2_MAIZE Zea mays Q8GZQ2_MAIZE D
Sb10g001620 Sorghum bicolor Sb10g001620 N
Si007199m.g Setaria italica Si007199m.g N