olig2 (Tetraodon nigroviridis)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSTNIG00000000234 T037692_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OLIG2
M02812_2.00 		Homo sapiens
AMCATATGBY
RVCATATGKT		 SELEX
Jolma et al.(2013)
OLIG2_1 		0.870 0.945
OLIG2
M02813_2.00 		Homo sapiens
AMCATATGBY
RVCATATGKT		 SELEX
Jolma et al.(2013)
OLIG2_2 		0.870 0.945
OLIG2
M04223_2.00 		Homo sapiens
AACAKMTGTB
VACAKMTGTT		 SELEX
Yin et al.(2017)
OLIG2_eDBD_HT-SELEX_1 		0.870 0.945
OLIG2
M04224_2.00 		Homo sapiens
AMCATATGKY
RMCATATGKT		 SELEX
Yin et al.(2017)
OLIG2_eDBD_HT-SELEX_2 		0.870 0.945
OLIG2
M08742_2.00 		Homo sapiens
NDNVHNRVVRVCAGMTGK
MCAKCTGBYBBYNDBNHN		 Misc
Kulakovskiy et al.(2013)
OLIG2_HUMAN.H11MO.0.B 		0.870 0.945
Olig2
M08771_2.00 		Mus musculus
NDNVHNRVVRVCAGMTGK
MCAKCTGBYBBYNDBNHN		 Misc
Kulakovskiy et al.(2013)
OLIG2_MOUSE.H11MO.0.A 		0.870 0.945
Olig2
M09477_2.00 		Mus musculus
RVCAKMTGKH
DMCAKMTGBY		 Misc
Heinz et al.(2010)
Neuron-Olig2_GSE30882 		0.870 0.945
OLIG2
M04225_2.00 		Homo sapiens
AACAKMTGKB
VMCAKMTGTT		 SELEX
Yin et al.(2017)
OLIG2_eDBD_Methyl-HT-SELEX_1 		0.870 0.945
OLIG2
M04226_2.00 		Homo sapiens
AMCATATGKT
AMCATATGKT		 SELEX
Yin et al.(2017)
OLIG2_eDBD_Methyl-HT-SELEX_2 		0.870 0.945
Olig3
M01745_2.00 		Mus musculus
NWAHHATANNN
NNNTATDDTWN		 PBM
Weirauch et al.(2014)
pTH5164 		0.870 0.927
OLIG3
M02798_2.00 		Homo sapiens
AMCATATGBY
RVCATATGKT		 SELEX
Jolma et al.(2013)
OLIG3_1 		0.870 0.927
OLIG3
M04175_2.00 		Homo sapiens
RMCATATGSY
RSCATATGKY		 SELEX
Yin et al.(2017)
OLIG3_FL_HT-SELEX 		0.870 0.927
OLIG3
M04171_2.00 		Homo sapiens
RMCATATGSY
RSCATATGKY		 SELEX
Yin et al.(2017)
OLIG3_eDBD_HT-SELEX_1 		0.870 0.927
OLIG3
M04172_2.00 		Homo sapiens
AACAKMTGBT
AVCAKMTGTT		 SELEX
Yin et al.(2017)
OLIG3_eDBD_HT-SELEX_2 		0.870 0.927
OLIG3
M04176_2.00 		Homo sapiens
RMCATATGGY
RCCATATGKY		 SELEX
Yin et al.(2017)
OLIG3_FL_Methyl-HT-SELEX 		0.870 0.927
OLIG3
M04173_2.00 		Homo sapiens
RMCATATGSY
RSCATATGKY		 SELEX
Yin et al.(2017)
OLIG3_eDBD_Methyl-HT-SELEX_1 		0.870 0.927
OLIG3
M04174_2.00 		Homo sapiens
VACAKMTGKY
RMCAKMTGTB		 SELEX
Yin et al.(2017)
OLIG3_eDBD_Methyl-HT-SELEX_2 		0.870 0.927
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000001699 bHLH 81 135

Links

Other bHLH family TFs
Other Tetraodon nigroviridis TFs

107 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28166.m001054 Ricinus communis 28166.m001054 I
AMTR_s00029p00112130 Amborella trichopoda AMTR_s00029p00112130 N
AMTR_s00098p00170370 Amborella trichopoda AMTR_s00098p00170370 N
Aquca_005_00425 Aquilegia coerulea Aquca_005_00425 I
BGIOSGA007247 Oryza indica BGIOSGA007247 N
cassava24574.valid.m1 Manihot esculenta cassava24574.valid.m1 I
cassava37031.valid.m1 Manihot esculenta cassava37031.valid.m1 I
cassava37032.valid.m1 Manihot esculenta cassava37032.valid.m1 I
Ca_06956 Cicer arietinum Ca_06956 I
Ca_16355 Cicer arietinum Ca_16355 I
Ciclev10009354m.g Citrus clementina Ciclev10009354m.g I
Ciclev10016381m.g Citrus clementina Ciclev10016381m.g N
Cla001735 Citrullus lanatus Cla001735 I
Cucsa.267130 Cucumis sativus Cucsa.267130 I
Cucsa.267170 Cucumis sativus Cucsa.267170 I
estExt_gwp_gw1.C_2460032 Physcomitrella patens estExt_gwp_gw1.C_2460032 I
Eucgr.F03420 Eucalyptus grandis Eucgr.F03420 I
evm.TU.supercontig_97.78 Carica papaya evm.TU.supercontig_97.78 I
e_gw1.229.33.1 Physcomitrella patens e_gw1.229.33.1 I
fgenesh1_pg.scaffold_13000185 Physcomitrella patens fgenesh1_pg.scaffold_13000185 I
gene03303-v1.0-hybrid Fragaria vesca gene03303-v1.0-hybrid I
gene24654-v1.0-hybrid Fragaria vesca gene24654-v1.0-hybrid I
GLYMA06G41620 Glycine max GLYMA06G41620 I
GLYMA12G34300 Glycine max GLYMA12G34300 I
GLYMA13G36260 Glycine max GLYMA13G36260 I
Gorai.009G176000 Gossypium raimondii Gorai.009G176000 N
GSMUA_Achr4G05280_001 Musa acuminata GSMUA_Achr4G05280_001 N
GSMUA_Achr4G05310_001 Musa acuminata GSMUA_Achr4G05310_001 N
GSMUA_Achr7G04180_001 Musa acuminata GSMUA_Achr7G04180_001 N
LPERR02G01020 Leersia perrieri LPERR02G01020 N
Lus10011167.g Linum usitatissimum Lus10011167.g I
Lus10043076.g Linum usitatissimum Lus10043076.g I
MDP0000264803 Malus domestica MDP0000264803 I
MTR_2g082640 Medicago truncatula MTR_2g082640 I
MTR_4g081370 Medicago truncatula MTR_4g081370 I
OBART02G01220 Oryza barthii OBART02G01220 N
OGLUM02G01100 Oryza glumaepatula OGLUM02G01100 N
OLONG_000275 Oryza longistaminata OLONG_000275 N
OMERI02G00630 Oryza meridionalis OMERI02G00630 N
ONIVA02G01100 Oryza nivara ONIVA02G01100 N
OPUNC02G00650 Oryza punctata OPUNC02G00650 N
orange1.1g026599m.g Citrus sinensis orange1.1g026599m.g I
orange1.1g026646m.g Citrus sinensis orange1.1g026646m.g N
ORGLA02G0011200 Oryza glaberrima ORGLA02G0011200 N
ORUFI02G01220 Oryza rufipogon ORUFI02G01220 N
OS02G0116600 Oryza sativa OS02G0116600 N
Pavir.Ab00172 Panicum virgatum Pavir.Ab00172 N
PK23013.1 Cannabis sativa PK23013.1 I
Pm029465 Prunus mume Pm029465 I
POPTR_0001s44230 Populus trichocarpa POPTR_0001s44230 I
POPTR_0011s13580 Populus trichocarpa POPTR_0011s13580 I
PRUPE_ppa009077mg Prunus persica PRUPE_ppa009077mg I
PRUPE_ppa010730mg Prunus persica PRUPE_ppa010730mg I
SapurV1A.0712s0010 Salix purpurea SapurV1A.0712s0010 I
SELMODRAFT_165311 Selaginella moellendorffii SELMODRAFT_165311 I
SELMODRAFT_165556 Selaginella moellendorffii SELMODRAFT_165556 I
Si018232m.g Setaria italica Si018232m.g N
TCM_030082 Theobroma cacao TCM_030082 I
TCM_031118 Theobroma cacao TCM_031118 I
VIT_00s0532g00050 Vitis vinifera VIT_00s0532g00050 N
VIT_12s0059g02650 Vitis vinifera VIT_12s0059g02650 I