TCM_030082 (Theobroma cacao)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 TCM_030082 T045410_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ILR3
M01714_2.00 		Arabidopsis thaliana
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH7211 		0.844 0.784
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY28539 bHLH 125 178
EOY28540 bHLH 70 120

Links

Other bHLH family TFs
Other Theobroma cacao TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28166.m001054 Ricinus communis 28166.m001054 I 0.872
AMTR_s00029p00112130 Amborella trichopoda AMTR_s00029p00112130 N 0.864
AMTR_s00098p00170370 Amborella trichopoda AMTR_s00098p00170370 N 0.840
Aquca_005_00425 Aquilegia coerulea Aquca_005_00425 I 0.855
ILR3 Arabidopsis thaliana AT5G54680 D 0.844
Bostr.26833s0797 Boechera stricta Bostr.26833s0797 I 0.844
Bra002964 Brassica rapa Bra002964 I 0.844
Bra022738 Brassica rapa Bra022738 I 0.844
Cagra.1629s0040 Capsella grandiflora Cagra.1629s0040 I 0.844
Carubv10026758m.g Capsella rubella Carubv10026758m.g I 0.844
cassava24574.valid.m1 Manihot esculenta cassava24574.valid.m1 I 0.872
cassava37031.valid.m1 Manihot esculenta cassava37031.valid.m1 I 0.872
cassava37032.valid.m1 Manihot esculenta cassava37032.valid.m1 I 0.872
Ca_06956 Cicer arietinum Ca_06956 I 0.872
Ca_16355 Cicer arietinum Ca_16355 I 0.872
Ciclev10009354m.g Citrus clementina Ciclev10009354m.g I 0.872
Ciclev10016381m.g Citrus clementina Ciclev10016381m.g N 0.855
Ciclev10016511m.g Citrus clementina Ciclev10016511m.g N 0.843
Cla001735 Citrullus lanatus Cla001735 I 0.872
Cucsa.267130 Cucumis sativus Cucsa.267130 I 0.872
Cucsa.267170 Cucumis sativus Cucsa.267170 I 0.872
estExt_gwp_gw1.C_2460032 Physcomitrella patens estExt_gwp_gw1.C_2460032 I 0.875
Eucgr.F03420 Eucalyptus grandis Eucgr.F03420 I 0.872
evm.TU.supercontig_97.78 Carica papaya evm.TU.supercontig_97.78 I 0.872
e_gw1.229.33.1 Physcomitrella patens e_gw1.229.33.1 I 0.875
fgenesh1_pg.scaffold_13000185 Physcomitrella patens fgenesh1_pg.scaffold_13000185 I 0.875
ILR3 Arabidopsis lyrata fgenesh2_kg.8__1365__AT5G54680.1 I 0.844
gene03303-v1.0-hybrid Fragaria vesca gene03303-v1.0-hybrid I 0.872
gene24654-v1.0-hybrid Fragaria vesca gene24654-v1.0-hybrid I 0.872
GLYMA06G41620 Glycine max GLYMA06G41620 I 0.872
GLYMA12G34300 Glycine max GLYMA12G34300 I 0.860
GLYMA13G36260 Glycine max GLYMA13G36260 I 0.860
GLYMA15G06803 Glycine max GLYMA15G06803 I 0.874
GLYMA15G06860 Glycine max GLYMA15G06860 I 0.874
Gorai.009G176000 Gossypium raimondii Gorai.009G176000 N 0.868
GSMUA_Achr8G33180_001 Musa acuminata GSMUA_Achr8G33180_001 I 0.847
Lus10011167.g Linum usitatissimum Lus10011167.g I 0.872
Lus10043076.g Linum usitatissimum Lus10043076.g I 0.872
MDP0000264803 Malus domestica MDP0000264803 I 0.872
MTR_2g082640 Medicago truncatula MTR_2g082640 I 0.872
MTR_4g081370 Medicago truncatula MTR_4g081370 I 0.872
orange1.1g026599m.g Citrus sinensis orange1.1g026599m.g I 0.872
orange1.1g026646m.g Citrus sinensis orange1.1g026646m.g N 0.855
orange1.1g026702m.g Citrus sinensis orange1.1g026702m.g N 0.843
PDK_20s1322801g004 Phoenix dactylifera PDK_20s1322801g004 N 0.864
PK23013.1 Cannabis sativa PK23013.1 I 0.872
Pm029465 Prunus mume Pm029465 I 0.872
POPTR_0001s44230 Populus trichocarpa POPTR_0001s44230 I 0.872
POPTR_0011s13580 Populus trichocarpa POPTR_0011s13580 I 0.872
PRUPE_ppa009077mg Prunus persica PRUPE_ppa009077mg I 0.872
PRUPE_ppa010730mg Prunus persica PRUPE_ppa010730mg I 0.875
SapurV1A.0712s0010 Salix purpurea SapurV1A.0712s0010 I 0.872
SELMODRAFT_165311 Selaginella moellendorffii SELMODRAFT_165311 I 0.875
SELMODRAFT_165556 Selaginella moellendorffii SELMODRAFT_165556 I 0.875
TCM_031118 Theobroma cacao TCM_031118 I 0.872
Thhalv10014564m.g Eutrema salsugineum Thhalv10014564m.g I 0.844
VIT_00s0532g00050 Vitis vinifera VIT_00s0532g00050 N 0.890
VIT_12s0059g02650 Vitis vinifera VIT_12s0059g02650 I 0.855