cassava46879.m1 (Manihot esculenta)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 cassava46879.m1 T048107_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK15505.1
M01125_2.00 		Cannabis sativa
NRCACGTGYN
NRCACGTGYN		 PBM
Lambert et al.(2019)
pTH10268 		0.881 0.776
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava46879.m1 bHLH 339 387

Links

Other bHLH family TFs
Other Manihot esculenta TFs

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29912.m005337 Ricinus communis 29912.m005337 I 0.914
Al_scaffold_0008_2143 Arabidopsis lyrata Al_scaffold_0008_2143 I 0.868
AMTR_s00064p00208400 Amborella trichopoda AMTR_s00064p00208400 I 0.880
Aquca_020_00438 Aquilegia coerulea Aquca_020_00438 I 0.857
AT5G56960 Arabidopsis thaliana AT5G56960 I 0.868
BGIOSGA002941 Oryza indica BGIOSGA002941 N 0.839
BGIOSGA033976 Oryza indica BGIOSGA033976 I 0.882
Bo2g032920 Brassica oleracea Bo2g032920 I 0.857
Bostr.26833s0565 Boechera stricta Bostr.26833s0565 I 0.868
Bra035639 Brassica rapa Bra035639 I 0.868
Cagra.1569s0004 Capsella grandiflora Cagra.1569s0004 I 0.868
Carubv10026331m.g Capsella rubella Carubv10026331m.g I 0.868
cassava25701.m1 Manihot esculenta cassava25701.m1 I 0.887
Ciclev10007937m.g Citrus clementina Ciclev10007937m.g I 0.892
Cla017100 Citrullus lanatus Cla017100 I 0.892
Cucsa.117060 Cucumis sativus Cucsa.117060 I 0.892
Eucgr.C03476 Eucalyptus grandis Eucgr.C03476 I 0.892
gene12658-v1.0-hybrid Fragaria vesca gene12658-v1.0-hybrid I 0.868
GLYMA09G07391 Glycine max GLYMA09G07391 I 0.853
GLYMA15G18580 Glycine max GLYMA15G18580 I 0.853
Gorai.001G012400 Gossypium raimondii Gorai.001G012400 I 0.849
GRMZM2G175480 Zea mays GRMZM2G175480 N 0.869
GSMUA_Achr6G00900_001 Musa acuminata GSMUA_Achr6G00900_001 I 0.892
LjT02N03.60.nd Lotus japonicus LjT02N03.60.nd I 0.853
LPERR05G05410 Leersia perrieri LPERR05G05410 I 0.882
Lus10017152.g Linum usitatissimum Lus10017152.g N 0.843
MDP0000119495 Malus domestica MDP0000119495 I 0.893
MDP0000252899 Malus domestica MDP0000252899 I 0.893
MDP0000782908 Malus domestica MDP0000782908 I 0.892
mgf018190m Mimulus guttatus mgf018190m I 0.868
OB05G15870 Oryza brachyantha OB05G15870 I 0.882
OBART05G06380 Oryza barthii OBART05G06380 I 0.882
OGLUM01G06710 Oryza glumaepatula OGLUM01G06710 N 0.839
OGLUM05G06690 Oryza glumaepatula OGLUM05G06690 I 0.882
ONIVA01G07090 Oryza nivara ONIVA01G07090 N 0.839
ONIVA05G07120 Oryza nivara ONIVA05G07120 I 0.882
OPUNC05G05910 Oryza punctata OPUNC05G05910 I 0.902
orange1.1g008967m.g Citrus sinensis orange1.1g008967m.g I 0.892
ORGLA05G0058200 Oryza glaberrima ORGLA05G0058200 I 0.882
ORUFI05G06870 Oryza rufipogon ORUFI05G06870 I 0.882
OS05G0199800 Oryza sativa OS05G0199800 I 0.882
Pavir.Ca00825 Panicum virgatum Pavir.Ca00825 I 0.893
Pavir.J01638 Panicum virgatum Pavir.J01638 I 0.893
PDK_20s1427741g002 Phoenix dactylifera PDK_20s1427741g002 I 0.859
PGSC0003DMG400000335 Solanum tuberosum PGSC0003DMG400000335 I 0.877
PGSC0003DMG400022043 Solanum tuberosum PGSC0003DMG400022043 I 0.860
PK15505.1 Cannabis sativa PK15505.1 D 0.881
Pm027191 Prunus mume Pm027191 I 0.868
POPTR_0006s15310 Populus trichocarpa POPTR_0006s15310 I 0.914
PRUPE_ppa020972mg Prunus persica PRUPE_ppa020972mg I 0.868
SapurV1A.0108s0270 Salix purpurea SapurV1A.0108s0270 I 0.884
Sb09g006196 Sorghum bicolor Sb09g006196 N 0.845
Si024546m.g Setaria italica Si024546m.g I 0.893
Solyc07g039570.2 Solanum lycopersicum Solyc07g039570.2 I 0.860
Thhalv10013360m.g Eutrema salsugineum Thhalv10013360m.g I 0.868
VIT_11s0016g02070 Vitis vinifera VIT_11s0016g02070 I 0.892