Cagra.0882s0006 (Capsella grandiflora)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Cagra.0882s0006 T049223_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.0882s0006.1.p bHLH 137 185

Links

Other bHLH family TFs
Other Capsella grandiflora TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27763.m000042 Ricinus communis 27763.m000042 I
MYB75 Arabidopsis thaliana AT1G56650 I
MYB113 Arabidopsis thaliana AT1G66370 D
MYB114 Arabidopsis thaliana AT1G66380 I
MYB90 Arabidopsis thaliana AT1G66390 I
Bo00835s060 Brassica oleracea Bo00835s060 I
Bo6g099880 Brassica oleracea Bo6g099880 I
Bo6g100940 Brassica oleracea Bo6g100940 I
Bostr.26959s0279 Boechera stricta Bostr.26959s0279 I
Bra001917 Brassica rapa Bra001917 I
Bra004162 Brassica rapa Bra004162 I
Bra039763 Brassica rapa Bra039763 I
Cagra.0463s0006 Capsella grandiflora Cagra.0463s0006 I
Cagra.0463s0007 Capsella grandiflora Cagra.0463s0007 I
Cagra.0463s0008 Capsella grandiflora Cagra.0463s0008 I
Cagra.2400s0001 Capsella grandiflora Cagra.2400s0001 I
Cagra.2629s0007 Capsella grandiflora Cagra.2629s0007 I
Carubv10020856m.g Capsella rubella Carubv10020856m.g I
Carubv10020888m.g Capsella rubella Carubv10020888m.g I
Ca_22078 Cicer arietinum Ca_22078 I
chr1.CM0141.350.nd Lotus japonicus chr1.CM0141.350.nd I
Ciclev10013455m.g Citrus clementina Ciclev10013455m.g I
Eucgr.H04157 Eucalyptus grandis Eucgr.H04157 I
evm.TU.supercontig_116.38 Carica papaya evm.TU.supercontig_116.38 I
evm.TU.supercontig_2742.1 Carica papaya evm.TU.supercontig_2742.1 I
evm.TU.supercontig_51.67 Carica papaya evm.TU.supercontig_51.67 I
fgenesh1_pg.C_scaffold_2000950 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000950 I
PAP1 Arabidopsis lyrata fgenesh2_kg.1__4777__AT1G56650.1 I
MYB113 Arabidopsis lyrata fgenesh2_kg.2__869__AT1G66370.1 I
gene31413-v1.0-hybrid Fragaria vesca gene31413-v1.0-hybrid I
GLYMA09G36966 Glycine max GLYMA09G36966 I
Gorai.001G087200 Gossypium raimondii Gorai.001G087200 I
Gorai.001G087400 Gossypium raimondii Gorai.001G087400 I
Gorai.013G118300 Gossypium raimondii Gorai.013G118300 I
Lus10042522.g Linum usitatissimum Lus10042522.g I
mgf019317m Mimulus guttatus mgf019317m I
MTR_0001s0360 Medicago truncatula MTR_0001s0360 I
MTR_5g078800 Medicago truncatula MTR_5g078800 I
MTR_5g078860 Medicago truncatula MTR_5g078860 I
MTR_5g078910 Medicago truncatula MTR_5g078910 I
MTR_5g078950 Medicago truncatula MTR_5g078950 I
MTR_5g079120 Medicago truncatula MTR_5g079120 I
MTR_5g079220 Medicago truncatula MTR_5g079220 I
MTR_5g079290 Medicago truncatula MTR_5g079290 I
MTR_7g017260 Medicago truncatula MTR_7g017260 I
MTR_8g060940 Medicago truncatula MTR_8g060940 I
PK05760.1 Cannabis sativa PK05760.1 I
PK17827.1 Cannabis sativa PK17827.1 I
Pm029440 Prunus mume Pm029440 I
Pm029442 Prunus mume Pm029442 I
Pm029445 Prunus mume Pm029445 I
POPTR_0005s14450 Populus trichocarpa POPTR_0005s14450 I
POPTR_0005s14460 Populus trichocarpa POPTR_0005s14460 I
POPTR_0005s14470 Populus trichocarpa POPTR_0005s14470 I
POPTR_0005s14480 Populus trichocarpa POPTR_0005s14480 I
PRUPE_ppa026640mg Prunus persica PRUPE_ppa026640mg I
SapurV1A.0230s0260 Salix purpurea SapurV1A.0230s0260 I
scaffold_201357.1 Arabidopsis lyrata scaffold_201357.1 I
ATMYB90 Arabidopsis lyrata scaffold_201358.1 I
Solyc10g086250.1 Solanum lycopersicum Solyc10g086250.1 I
Solyc10g086260.1 Solanum lycopersicum Solyc10g086260.1 I
Solyc10g086270.1 Solanum lycopersicum Solyc10g086270.1 I
Solyc10g086290.1 Solanum lycopersicum Solyc10g086290.1 I
TCM_019192 Theobroma cacao TCM_019192 I
Thhalv10019041m.g Eutrema salsugineum Thhalv10019041m.g I
VIT_02s0033g00390 Vitis vinifera VIT_02s0033g00390 I
VIT_02s0033g00400 Vitis vinifera VIT_02s0033g00400 I
VIT_02s0033g00410 Vitis vinifera VIT_02s0033g00410 I
VIT_02s0033g00450 Vitis vinifera VIT_02s0033g00450 I
VIT_14s0006g01280 Vitis vinifera VIT_14s0006g01280 I
VIT_14s0006g01290 Vitis vinifera VIT_14s0006g01290 I
VIT_14s0006g01340 Vitis vinifera VIT_14s0006g01340 I