estExt_fgenesh2_pg.C_1140009 (Branchiostoma floridae)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 estExt_fgenesh2_pg.C_1140009 T070827_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
jund
M01842_2.00 		Xenopus tropicalis
NTGACDCAH
DTGHGTCAN		 PBM
Weirauch et al.(2014)
pTH8562 		0.884 0.875
Jund
M01001_2.00 		Mus musculus
NTGACKYAH
DTRMGTCAN		 PBM
Mann et al.(2013)
JUND_UM_HK 		0.882 0.828
Jund
M01822_2.00 		Mus musculus
RTGACKCAH
DTGMGTCAY		 PBM
Weirauch et al.(2014)
pTH5462 		0.882 0.828
JUND
M04281_2.00 		Homo sapiens
NRTGACGCAYN
NRTGCGTCAYN		 SELEX
Yin et al.(2017)
JUND_eDBD_HT-SELEX_1 		0.882 0.828
JUND
M04282_2.00 		Homo sapiens
BRTKACGTCAYS
SRTGACGTMAYV		 SELEX
Yin et al.(2017)
JUND_eDBD_HT-SELEX_2 		0.882 0.828
JUND
M05836_2.00 		Homo sapiens
RTGACKCAYH
DRTGMGTCAY		 SMiLE-seq
Isakova et al.(2017)
JUND_primary 		0.882 0.828
JUND
M05837_2.00 		Homo sapiens
NNTKACGTCAB
VTGACGTMANN		 SMiLE-seq
Isakova et al.(2017)
JUND_secondary 		0.882 0.828
JUND
M08068_2.00 		Homo sapiens
NDNRATGABGTMATN
NATKACVTCATYNHN		 ChIP-seq
Mathelier et al.(2014)
MA0492.1 		0.882 0.828
JUND
M08067_2.00 		Homo sapiens
DRTGASTCATN
NATGASTCAYH		 ChIP-seq
Mathelier et al.(2014)
MA0491.1 		0.882 0.828
JUND
M07814_2.00 		Homo sapiens
NNTGASTCATWHHDRDANH
DNTHYHDDWATGASTCANN		 ChIP-seq
Gerstein et al.(2012)
GM12878_JUND_Stanford 		0.882 0.828
JUND
M07815_2.00 		Homo sapiens
VTGASTCAYCN
NGRTGASTCAB		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_JUND_HudsonAlpha 		0.882 0.828
JUND
M07816_2.00 		Homo sapiens
DGATGASTCAYNBHN
NDVNRTGASTCATCH		 ChIP-seq
Gerstein et al.(2012)
HeLa-S3_JUND_Stanford 		0.882 0.828
JUND
M07817_2.00 		Homo sapiens
VTGASTCAYYHHN
NDDRRTGASTCAB		 ChIP-seq
Gerstein et al.(2012)
HepG2_JUND_HudsonAlpha 		0.882 0.828
JUND
M07818_2.00 		Homo sapiens
BDRTGACKYMWBNNN
NNNVWKRMGTCAYHV		 ChIP-seq
Gerstein et al.(2012)
HepG2_JUND_Stanford 		0.882 0.828
JUND
M07819_2.00 		Homo sapiens
BVTGACGTCAYYNN
NNRRTGACGTCABV		 ChIP-seq
Gerstein et al.(2012)
K562_JUND_Stanford 		0.882 0.828
JUND
M07820_2.00 		Homo sapiens
NGRTGASTCAYNBBB
VVVNRTGASTCAYCN		 ChIP-seq
Gerstein et al.(2012)
K562_JUND_UChicago 		0.882 0.828
JUND
M08797_2.00 		Homo sapiens
NRTGACTCABN
NVTGAGTCAYN		 Misc
Kulakovskiy et al.(2013)
JUND_HUMAN.H11MO.0.A 		0.882 0.828
Jund
M08846_2.00 		Mus musculus
RTGACTCABNN
NNVTGAGTCAY		 Misc
Kulakovskiy et al.(2013)
JUND_MOUSE.H11MO.0.A 		0.882 0.828
JUND
M09487_2.00 		Homo sapiens
RTGACGTCAYNN
NNRTGACGTCAY		 Misc
Heinz et al.(2010)
K562-JunD 		0.882 0.828
JUND
M09966_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$JUND_01 		0.882 0.828
JUND
M09967_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$JUND_02 		0.882 0.828
JUND
M09968_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$JUND_Q6 		0.882 0.828
Jund
M01000_2.00 		Mus musculus
NRTGACTCAN
NTGAGTCAYN		 PBM
Mann et al.(2013)
JUND_M_HK 		0.882 0.828
JUND
M04283_2.00 		Homo sapiens
BATGASTCATB
VATGASTCATV		 SELEX
Yin et al.(2017)
JUND_eDBD_Methyl-HT-SELEX_1 		0.882 0.828
JUND
M04284_2.00 		Homo sapiens
BRTGACDCATV
BATGHGTCAYV		 SELEX
Yin et al.(2017)
JUND_eDBD_Methyl-HT-SELEX_2 		0.882 0.828
Jun
M00995_2.00 		Mus musculus
NTGACKYMH
DKRMGTCAN		 PBM
Mann et al.(2013)
JUN_UM_HK 		0.871 0.812
Jun
M01816_2.00 		Mus musculus
NTKACKYAD
HTRMGTMAN		 PBM
Weirauch et al.(2014)
pTH4337 		0.871 0.812
JUN
M04339_2.00 		Homo sapiens
NATGACGTCAYN
NRTGACGTCATN		 SELEX
Yin et al.(2017)
JUN_FL_HT-SELEX_1 		0.871 0.812
JUN
M04340_2.00 		Homo sapiens
NRTGACKCAYN
NRTGMGTCAYN		 SELEX
Yin et al.(2017)
JUN_FL_HT-SELEX_2 		0.871 0.812
JUN
M05841_2.00 		Homo sapiens
NATGACKCATN
NATGMGTCATN		 SMiLE-seq
Isakova et al.(2017)
JUN_primary 		0.871 0.812
JUN
M05842_2.00 		Homo sapiens
NNNDATGACGTMAHNVN
NBNDTKACGTCATHNNN		 SMiLE-seq
Isakova et al.(2017)
JUN_secondary 		0.871 0.812
JUN
M04037_2.00 		Homo sapiens
RTGACKCAY
RTGMGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
JUN.1 		0.871 0.812
JUN
M04038_2.00 		Homo sapiens
RTGACGTCAT
ATGACGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
JUN.2 		0.871 0.812
JUN
M08072_2.00 		Homo sapiens
ATKACMTCATHNN
NNDATGAKGTMAT		 ChIP-seq
Mathelier et al.(2014)
MA0488.1 		0.871 0.812
JUN
M08073_2.00 		Homo sapiens
DDDDDRTGASTCAB
VTGASTCAYHHHHH		 ChIP-seq
Mathelier et al.(2014)
MA0489.1 		0.871 0.812
JUN
M07834_2.00 		Homo sapiens
VATDSYHNNNNVVTGASKYM
KRMSTCABBNNNNDRSHATB		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_CJUN_Stanford 		0.871 0.812
JUN
M07835_2.00 		Homo sapiens
DRTGACTCABN
NVTGAGTCAYH		 ChIP-seq
Gerstein et al.(2012)
HeLa-S3_CJUN_Stanford 		0.871 0.812
JUN
M07836_2.00 		Homo sapiens
NRTGACRTCAYYNNN
NNNRRTGAYGTCAYN		 ChIP-seq
Gerstein et al.(2012)
HepG2_CJUN_Stanford 		0.871 0.812
JUN
M07837_2.00 		Homo sapiens
NDRDDRRTGASTCAY
RTGASTCAYYHHYHN		 ChIP-seq
Gerstein et al.(2012)
HUVEC_CJUN_Stanford 		0.871 0.812
JUN
M07838_2.00 		Homo sapiens
NRTGACTCABN
NVTGAGTCAYN		 ChIP-seq
Gerstein et al.(2012)
K562_CJUN_Stanford 		0.871 0.812
JUN
M08806_2.00 		Homo sapiens
DRTGACTCABN
NVTGAGTCAYH		 Misc
Kulakovskiy et al.(2013)
JUN_HUMAN.H11MO.0.A 		0.871 0.812
Jun
M08837_2.00 		Mus musculus
VTGACTCABN
NVTGAGTCAB		 Misc
Kulakovskiy et al.(2013)
JUN_MOUSE.H11MO.0.A 		0.871 0.812
JUN
M10004_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CJUN_Q6 		0.871 0.812
JUN
M04341_2.00 		Homo sapiens
NATGACTCATN
NATGAGTCATN		 SELEX
Yin et al.(2017)
JUN_FL_Methyl-HT-SELEX_1 		0.871 0.812
JUN
M04342_2.00 		Homo sapiens
NATGASTCATN
NATGASTCATN		 SELEX
Yin et al.(2017)
JUN_FL_Methyl-HT-SELEX_2 		0.871 0.812
JUNB
M04329_2.00 		Homo sapiens
BRTGACGTCATN
NATGACGTCAYV		 SELEX
Yin et al.(2017)
JUNB_eDBD_HT-SELEX 		0.839 0.766
JUNB
M05838_2.00 		Homo sapiens
VTGACTCA
TGAGTCAB		 SMiLE-seq
Isakova et al.(2017)
JUNB_primary 		0.839 0.766
JUNB
M05839_2.00 		Homo sapiens
RTKACGTMAY
RTKACGTMAY		 SMiLE-seq
Isakova et al.(2017)
JUNB_secondary 		0.839 0.766
JUNB
M08070_2.00 		Homo sapiens
NRRTGASTCAB
VTGASTCAYYN		 ChIP-seq
Mathelier et al.(2014)
MA0490.1 		0.839 0.766
JUNB
M07829_2.00 		Homo sapiens
NDRTGASTCABNNNB
VNNNVTGASTCAYHN		 ChIP-seq
Gerstein et al.(2012)
K562_JUNB_UChicago 		0.839 0.766
JUNB
M08803_2.00 		Homo sapiens
NVTGACTCABH
DVTGAGTCABN		 Misc
Kulakovskiy et al.(2013)
JUNB_HUMAN.H11MO.0.A 		0.839 0.766
JUNB
M09992_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$JUNB_Q6 		0.839 0.766
JUNB
M04330_2.00 		Homo sapiens
BRTGASTCATV
BATGASTCAYV		 SELEX
Yin et al.(2017)
JUNB_eDBD_Methyl-HT-SELEX 		0.839 0.766
Junb
M00760_2.00 		Mus musculus
NNNNNNNN
NNNNNNNN		 PBM
Weirauch et al.(2013)
pTH3064 		0.839 0.750
Junb
M08838_2.00 		Mus musculus
VTGACTCAB
VTGAGTCAB		 Misc
Kulakovskiy et al.(2013)
JUNB_MOUSE.H11MO.0.A 		0.839 0.750
Jra
M03636_2.00 		Drosophila melanogaster
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Nitta et al.(2015)
Jra_1 		0.813 0.656
Jra
M06018_2.00 		Drosophila melanogaster
DMTGASTCAYS
SRTGASTCAKH		 B1H
Zhu et al.(2011)
kay_Jra_SANGER_5_FBgn0001291 		0.813 0.656
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh2_pg.C_1140009 bZIP 240 303

Links

Other bZIP family TFs
Other Branchiostoma floridae TFs

232 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29929.m004704 Ricinus communis 29929.m004704 D
AMTR_s00005p00185670 Amborella trichopoda AMTR_s00005p00185670 I
AMTR_s00055p00209070 Amborella trichopoda AMTR_s00055p00209070 I
Aquca_011_00297 Aquilegia coerulea Aquca_011_00297 I
Aquca_123_00031 Aquilegia coerulea Aquca_123_00031 I
GT-1 Arabidopsis thaliana AT1G13450 D
GT-4 Arabidopsis thaliana AT3G25990 D
Bo2g138840 Brassica oleracea Bo2g138840 I
Bo5g017510 Brassica oleracea Bo5g017510 I
Bo8g107400 Brassica oleracea Bo8g107400 I
Bostr.0556s0275 Boechera stricta Bostr.0556s0275 I
Bostr.13671s0104 Boechera stricta Bostr.13671s0104 I
Bra019721 Brassica rapa Bra019721 I
Bra026903 Brassica rapa Bra026903 I
Bra036354 Brassica rapa Bra036354 I
Cagra.3501s0157 Capsella grandiflora Cagra.3501s0157 I
Cagra.6197s0012 Capsella grandiflora Cagra.6197s0012 I
Carubv10009313m.g Capsella rubella Carubv10009313m.g I
Carubv10017413m.g Capsella rubella Carubv10017413m.g I
cassava11841.valid.m1 Manihot esculenta cassava11841.valid.m1 I
cassava13991.valid.m1 Manihot esculenta cassava13991.valid.m1 D
Ciclev10031750m.g Citrus clementina Ciclev10031750m.g I
Cla023054 Citrullus lanatus Cla023054 I
Cucsa.394820 Cucumis sativus Cucsa.394820 I
Eucgr.B03456 Eucalyptus grandis Eucgr.B03456 I
Eucgr.J02286 Eucalyptus grandis Eucgr.J02286 I
evm.TU.supercontig_130.35 Carica papaya evm.TU.supercontig_130.35 I
evm.TU.supercontig_1453.1 Carica papaya evm.TU.supercontig_1453.1 I
fgenesh2_kg.5__353__AT3G25990.1 Arabidopsis lyrata fgenesh2_kg.5__353__AT3G25990.1 D
GLYMA11G37390 Glycine max GLYMA11G37390 D
GLYMA18G01360 Glycine max GLYMA18G01360 I
Gorai.008G163200 Gossypium raimondii Gorai.008G163200 I
Gorai.009G333800 Gossypium raimondii Gorai.009G333800 I
GRMZM2G047370 Zea mays GRMZM2G047370 I
GSMUA_Achr3G19370_001 Musa acuminata GSMUA_Achr3G19370_001 I
GSMUA_Achr5G17240_001 Musa acuminata GSMUA_Achr5G17240_001 I
LjT04G17.70.nc Lotus japonicus LjT04G17.70.nc I
Lus10015824.g Linum usitatissimum Lus10015824.g I
Lus10036978.g Linum usitatissimum Lus10036978.g I
MDP0000164819 Malus domestica MDP0000164819 D
MDP0000275412 Malus domestica MDP0000275412 I
mgf016368m Mimulus guttatus mgf016368m I
MLOC_64014 Hordeum vulgare MLOC_64014 I
MTR_3g085960 Medicago truncatula MTR_3g085960 D
OB04G23970 Oryza brachyantha OB04G23970 I
orange1.1g015940m.g Citrus sinensis orange1.1g015940m.g I
OS04G0486400 Oryza sativa OS04G0486400 D
Pavir.Ga01561 Panicum virgatum Pavir.Ga01561 I
PDK_20s1345831g002 Phoenix dactylifera PDK_20s1345831g002 I
PK20543.1 Cannabis sativa PK20543.1 D
Pm006885 Prunus mume Pm006885 I
Pm016214 Prunus mume Pm016214 I
POPTR_0008s17980 Populus trichocarpa POPTR_0008s17980 I
POPTR_0010s06510 Populus trichocarpa POPTR_0010s06510 I
PRUPE_ppa005942mg Prunus persica PRUPE_ppa005942mg I
PRUPE_ppa009404mg Prunus persica PRUPE_ppa009404mg I
SapurV1A.0206s0170 Salix purpurea SapurV1A.0206s0170 I
SapurV1A.1719s0020 Salix purpurea SapurV1A.1719s0020 I
GT-1 Arabidopsis lyrata scaffold_101505.1 D
Si010147m.g Setaria italica Si010147m.g I
Si036121m.g Setaria italica Si036121m.g I
Solyc12g077540.1 Solanum lycopersicum Solyc12g077540.1 I
TCM_010751 Theobroma cacao TCM_010751 I
Thhalv10004359m.g Eutrema salsugineum Thhalv10004359m.g I
Thhalv10007959m.g Eutrema salsugineum Thhalv10007959m.g I
VIT_01s0010g02420 Vitis vinifera VIT_01s0010g02420 I
VIT_14s0171g00450 Vitis vinifera VIT_14s0171g00450 I
VIT_17s0000g10420 Vitis vinifera VIT_17s0000g10420 D