Pavir.J18543 (Panicum virgatum)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Pavir.J18543 T072470_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BZIP17
M01778_2.00 		Arabidopsis thaliana
NNHBACGYRN
NYRCGTVDNN		 PBM
Weirauch et al.(2014)
pTH7221 		0.815 0.781
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J18543.1.p bZIP 174 238

Links

Other bZIP family TFs
Other Panicum virgatum TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30204.m001750 Ricinus communis 30204.m001750 N 0.000
AMTR_s00029p00248140 Amborella trichopoda AMTR_s00029p00248140 N 0.000
AMTR_s00045p00026940 Amborella trichopoda AMTR_s00045p00026940 N 0.000
EAF1B Arabidopsis thaliana AT3G24870 N 0.000
EAF1A Arabidopsis thaliana AT3G24880 N 0.000
Bo3g083740 Brassica oleracea Bo3g083740 N 0.000
Bo4g133290 Brassica oleracea Bo4g133290 N 0.000
Bo7g031610 Brassica oleracea Bo7g031610 N 0.000
Bostr.19424s0133 Boechera stricta Bostr.19424s0133 N 0.000
Bostr.2021s0055 Boechera stricta Bostr.2021s0055 N 0.000
Bra013238 Brassica rapa Bra013238 N 0.000
Bra032689 Brassica rapa Bra032689 N 0.000
Carubv10016123m.g Capsella rubella Carubv10016123m.g N 0.000
cassava349.valid.m1 Manihot esculenta cassava349.valid.m1 N 0.000
chr1.LjT36F23.70.nd Lotus japonicus chr1.LjT36F23.70.nd N 0.000
Ciclev10018446m.g Citrus clementina Ciclev10018446m.g N 0.000
Cla015187 Citrullus lanatus Cla015187 N 0.000
Cucsa.078210 Cucumis sativus Cucsa.078210 N 0.000
Eucgr.H00795 Eucalyptus grandis Eucgr.H00795 N 0.000
Eucgr.K02162 Eucalyptus grandis Eucgr.K02162 N 0.000
evm.TU.supercontig_8.144 Carica papaya evm.TU.supercontig_8.144 N 0.000
fgenesh2_kg.3__2706__AT3G24880.1 Arabidopsis lyrata fgenesh2_kg.3__2706__AT3G24880.1 N 0.000
gene17608-v1.0-hybrid Fragaria vesca gene17608-v1.0-hybrid N 0.000
GLYMA03G18725 Glycine max GLYMA03G18725 N 0.000
GLYMA08G46710 Glycine max GLYMA08G46710 N 0.000
GLYMA16G14060 Glycine max GLYMA16G14060 N 0.000
GLYMA18G36628 Glycine max GLYMA18G36628 N 0.000
Gorai.001G187100 Gossypium raimondii Gorai.001G187100 N 0.000
Gorai.001G233800 Gossypium raimondii Gorai.001G233800 N 0.000
Gorai.004G226000 Gossypium raimondii Gorai.004G226000 N 0.000
Gorai.007G155000 Gossypium raimondii Gorai.007G155000 N 0.000
GSMUA_Achr11G13340_001 Musa acuminata GSMUA_Achr11G13340_001 N 0.000
GSMUA_Achr1G21080_001 Musa acuminata GSMUA_Achr1G21080_001 N 0.000
Lus10011850.g Linum usitatissimum Lus10011850.g N 0.000
Lus10022788.g Linum usitatissimum Lus10022788.g N 0.000
MDP0000155726 Malus domestica MDP0000155726 N 0.000
MDP0000250529 Malus domestica MDP0000250529 N 0.000
MTR_7g056603 Medicago truncatula MTR_7g056603 N 0.000
orange1.1g000147m.g Citrus sinensis orange1.1g000147m.g N 0.000
PDK_20s1355591g002 Phoenix dactylifera PDK_20s1355591g002 N 0.000
PK23540.1 Cannabis sativa PK23540.1 N 0.000
Pm020347 Prunus mume Pm020347 N 0.000
POPTR_0002s24490 Populus trichocarpa POPTR_0002s24490 N 0.000
POPTR_0014s19020 Populus trichocarpa POPTR_0014s19020 N 0.000
PRUPE_ppa000065mg Prunus persica PRUPE_ppa000065mg N 0.000
SapurV1A.0135s0340 Salix purpurea SapurV1A.0135s0340 N 0.000
SapurV1A.0342s0100 Salix purpurea SapurV1A.0342s0100 N 0.000
Solyc06g083420.1 Solanum lycopersicum Solyc06g083420.1 N 0.000
Solyc09g060080.2 Solanum lycopersicum Solyc09g060080.2 N 0.000
TCM_002924 Theobroma cacao TCM_002924 N 0.000
Thhalv10002368m.g Eutrema salsugineum Thhalv10002368m.g N 0.000
VIT_07s0005g06680 Vitis vinifera VIT_07s0005g06680 N 0.000