CJA04579 (Caenorhabditis japonica)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CJA04579 T083740_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
odd-2
M00618_2.00 		Caenorhabditis elegans
NGCTACYGK
MCRGTAGCN		 PBM
Narasimhan et al.(2015)
pTH9150 		0.823 0.971
Osr2
M00132_2.00 		Mus musculus
NGCTWCYGNN
NNCRGWAGCN		 PBM
Badis et al.(2009)
Osr2_1727 		0.770 0.826
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CJA04579 C2H2 ZF 125 147
CJA04579 C2H2 ZF 153 175
CJA04579 C2H2 ZF 181 203

Links

Other C2H2 ZF family TFs
Other Caenorhabditis japonica TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29801.m003200 Ricinus communis 29801.m003200 N 0.000
AT3G19184 Arabidopsis thaliana AT3G19184 N 0.000
Bo6g124000 Brassica oleracea Bo6g124000 N 0.000
Bra035129 Brassica rapa Bra035129 N 0.000
cassava1104.valid.m1 Manihot esculenta cassava1104.valid.m1 N 0.000
Ciclev10029072m.g Citrus clementina Ciclev10029072m.g N 0.000
Cla016258 Citrullus lanatus Cla016258 N 0.000
Cucsa.219930 Cucumis sativus Cucsa.219930 N 0.000
evm.TU.supercontig_62.23 Carica papaya evm.TU.supercontig_62.23 N 0.000
fgenesh2_kg.3__2134__AT3G19184.1 Arabidopsis lyrata fgenesh2_kg.3__2134__AT3G19184.1 N 0.000
GLYMA06G04200 Glycine max GLYMA06G04200 N 0.000
Gorai.013G042700 Gossypium raimondii Gorai.013G042700 N 0.000
Lus10014044.g Linum usitatissimum Lus10014044.g N 0.000
Lus10019870.g Linum usitatissimum Lus10019870.g N 0.000
mgf008645m Mimulus guttatus mgf008645m N 0.000
orange1.1g036915m.g Citrus sinensis orange1.1g036915m.g N 0.000
PGSC0003DMG400025792 Solanum tuberosum PGSC0003DMG400025792 N 0.000
PK25650.1 Cannabis sativa PK25650.1 N 0.000
Pm021349 Prunus mume Pm021349 N 0.000
POPTR_0009s10600 Populus trichocarpa POPTR_0009s10600 N 0.000
SapurV1A.0090s0760 Salix purpurea SapurV1A.0090s0760 N 0.000
SapurV1A.0090s0770 Salix purpurea SapurV1A.0090s0770 N 0.000
Solyc01g108140.2 Solanum lycopersicum Solyc01g108140.2 N 0.000
TCM_007039 Theobroma cacao TCM_007039 N 0.000
Thhalv10019015m.g Eutrema salsugineum Thhalv10019015m.g N 0.000
VIT_03s0063g00620 Vitis vinifera VIT_03s0063g00620 N 0.000