DAPPUDRAFT_238529 (Daphnia pulex)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 DAPPUDRAFT_238529 T085359_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
bowl
M03676_2.00 		Drosophila melanogaster
GCGTAABACNRGKAGYN
NRCTMCYNGTVTTACGC		 SELEX
Nitta et al.(2015)
bowl_1 		0.823 0.965
bowl
M03677_2.00 		Drosophila melanogaster
NGCTACYGTRTTACGCN
NGCGTAAYACRGTAGCN		 SELEX
Nitta et al.(2015)
bowl_2 		0.823 0.965
bowl
M06090_2.00 		Drosophila melanogaster
RCTWCYGK
MCRGWAGY		 B1H
Zhu et al.(2011)
bowl_SANGER_5_FBgn0004893 		0.823 0.965
sob
M03674_2.00 		Drosophila melanogaster
RCTACYGNRTTACGCV
BGCGTAAYNCRGTAGY		 SELEX
Nitta et al.(2015)
sob_1 		0.813 0.948
sob
M03675_2.00 		Drosophila melanogaster
NGCGTAABNSNRGTAGY
RCTACYNSNVTTACGCN		 SELEX
Nitta et al.(2015)
sob_2 		0.813 0.948
sob
M06088_2.00 		Drosophila melanogaster
GCTWCTGBDNBDV
BHVNHVCAGWAGC		 B1H
Zhu et al.(2011)
sob_SANGER_10_FBgn0004892 		0.813 0.948
sob
M06089_2.00 		Drosophila melanogaster
BDGCTACYGKDBNN
NNVHMCRGTAGCHV		 B1H
Zhu et al.(2011)
sob_SOLEXA_5_FBgn0004892 		0.813 0.948
OSR2
M04521_2.00 		Homo sapiens
NGCTACYGBD
HVCRGTAGCN		 SELEX
Yin et al.(2017)
OSR2_eDBD_HT-SELEX 		0.793 0.870
OSR2
M08324_2.00 		Homo sapiens
NBDGCTNCTGN
NCAGNAGCHVN		 ChIP-seq
Schmitges et al.(2016)
Q8N2R0.MEME 		0.793 0.870
OSR2
M08908_2.00 		Homo sapiens
NBHNYWGCTNCTSHDB
VHDSAGNAGCWRNDVN		 Misc
Kulakovskiy et al.(2013)
OSR2_HUMAN.H11MO.0.C 		0.793 0.870
OSR2
M04522_2.00 		Homo sapiens
NGCTACTGND
HNCAGTAGCN		 SELEX
Yin et al.(2017)
OSR2_eDBD_Methyl-HT-SELEX 		0.793 0.870
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFX84961 C2H2 ZF 257 279
EFX84961 C2H2 ZF 285 307
EFX84961 C2H2 ZF 313 335
EFX84961 C2H2 ZF 341 363
EFX84961 C2H2 ZF 369 391

Links

Other C2H2 ZF family TFs
Other Daphnia pulex TFs

110 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL007453 Aedes aegypti AAEL007453 I 0.807
AAEL008961 Aedes aegypti AAEL008961 I 0.821
AATE001257 Anopheles atroparvus AATE001257 I 0.809
ACEP20577 Atta cephalotes ACEP20577 I 0.805
ACEP20581 Atta cephalotes ACEP20581 I 0.821
ACOM030727 Anopheles coluzzii ACOM030727 I 0.809
ACYPI007518 Acyrthosiphon pisum ACYPI007518 I 0.807
ACYPI008391 Acyrthosiphon pisum ACYPI008391 I 0.819
ADAC005347 Anopheles darlingi ADAC005347 I 0.801
ADAC010373 Anopheles darlingi ADAC010373 I 0.813
AEPI004813 Anopheles epiroticus AEPI004813 I 0.809
AFAF004720 Anopheles farauti AFAF004720 I 0.809
AFUN006320 Anopheles funestus AFUN006320 I 0.809
ODR1 Anopheles gambiae AGAP007973 I 0.809
ODR2 Anopheles gambiae AGAP008222 I 0.821
AMEC005957 Anopheles melas AMEC005957 I 0.809
AMEM017192 Anopheles merus AMEM017192 I 0.809
AMIN006295 Anopheles minimus AMIN006295 I 0.809
ASTEI01738 Anopheles stephensi ASTEI01738 I 0.809
Cflo_02188--XP_001120905.1_APIME Camponotus floridanus Cflo_02188--XP_001120905.1_APIME I 0.801
Cflo_02191--XP_393879.3_APIME Camponotus floridanus Cflo_02191--XP_393879.3_APIME I 0.821
CPIJ010652 Culex quinquefasciatus CPIJ010652 I 0.807
CpipJ_CPIJ010652 Culex pipiens CpipJ_CPIJ010652 I 0.807
D917_03163 Trichinella nativa D917_03163 I 0.760
D917_07818 Trichinella nativa D917_07818 I 0.760
DAPPUDRAFT_347540 Daphnia pulex DAPPUDRAFT_347540 I 0.821
EFV49300 Trichinella spiralis EFV49300 I 0.760
ENSAMEG00000000519 Ailuropoda melanoleuca ENSAMEG00000000519 I 0.793
OSR2 Canis familiaris ENSCAFG00000000493 I 0.793
OSR2 Callithrix jacchus ENSCJAG00000015627 I 0.793
Osr2 Dipodomys ordii ENSDORG00000011823 I 0.793
OSR2 Equus caballus ENSECAG00000017784 I 0.793
OSR2 Erinaceus europaeus ENSEEUG00000008304 I 0.793
ENSFALG00000005731 Ficedula albicollis ENSFALG00000005731 I 0.793
OSR2 Homo sapiens ENSG00000164920 D 0.793
ENSGALG00000016016 Gallus gallus ENSGALG00000016016 I 0.793
OSR2 Gorilla gorilla ENSGGOG00000006716 I 0.793
OSR2 Microcebus murinus ENSMICG00000004390 I 0.793
OSR2 Macaca mulatta ENSMMUG00000022185 I 0.793
ENSMMUP00000029201 Macaca fascicularis ENSMMUP00000029201 I 0.793
ENSNLEG00000002725 Nomascus leucogenys ENSNLEG00000002725 I 0.793
ENSOARG00000002902 Ovis aries ENSOARG00000002902 I 0.793
OSR2 Otolemur garnettii ENSOGAG00000007928 I 0.793
ENSONIG00000006859 Oreochromis niloticus ENSONIG00000006859 I 0.793
OSR2 Ochotona princeps ENSOPRG00000005325 I 0.793
osr2 Oryzias latipes ENSORLG00000002797 I 0.793
OSR2 Procavia capensis ENSPCAG00000003419 I 0.793
ENSPPYG00000018781 Pongo abelii ENSPPYG00000018781 I 0.793
OSR2 Pan troglodytes ENSPTRG00000020463 I 0.793
OSR2 Pteropus vampyrus ENSPVAG00000004363 I 0.793
ENSSHAG00000007793 Sarcophilus harrisii ENSSHAG00000007793 I 0.793
osr2 Takifugu rubripes ENSTRUG00000011070 I 0.793
ENSTSYG00000013426 Tarsius syrichta ENSTSYG00000013426 I 0.793
OSR2 Tursiops truncatus ENSTTRG00000007477 I 0.793
estExt_fgenesh2_pg.C_1600105 Branchiostoma floridae estExt_fgenesh2_pg.C_1600105 I 0.800
estExt_fgenesh2_pg.C_1600113 Branchiostoma floridae estExt_fgenesh2_pg.C_1600113 I 0.800
sob Drosophila melanogaster FBgn0004892 D 0.813
bowl Drosophila melanogaster FBgn0004893 D 0.823
GA10014 Drosophila pseudoobscura FBgn0070073 I 0.823
GF14663 Drosophila ananassae FBgn0091690 I 0.815
GF15254 Drosophila ananassae FBgn0092279 I 0.823
GG24427 Drosophila erecta FBgn0116559 I 0.813
GG24967 Drosophila erecta FBgn0117096 I 0.823
GH13192 Drosophila grimshawi FBgn0120669 I 0.815
GH13710 Drosophila grimshawi FBgn0121186 I 0.823
GI17769 Drosophila mojavensis FBgn0140510 I 0.813
GI23940 Drosophila mojavensis FBgn0146665 I 0.823
GL18676 Drosophila persimilis FBgn0156277 I 0.823
GL19470 Drosophila persimilis FBgn0157069 I 0.813
GM18136 Drosophila sechellia FBgn0173043 I 0.813
GM18435 Drosophila sechellia FBgn0173342 I 0.823
GD22744 Drosophila simulans FBgn0194140 I 0.813
GD23254 Drosophila simulans FBgn0194642 I 0.823
GJ17594 Drosophila virilis FBgn0204764 I 0.813
GJ21213 Drosophila virilis FBgn0208346 I 0.823
GK14650 Drosophila willistoni FBgn0216656 I 0.823
GK15478 Drosophila willistoni FBgn0217483 I 0.813
GE14841 Drosophila yakuba FBgn0232433 I 0.813
GE18258 Drosophila yakuba FBgn0235686 I 0.823
GA25976 Drosophila pseudoobscura FBgn0247353 I 0.813
fgenesh2_pg.scaffold_160000107 Branchiostoma floridae fgenesh2_pg.scaffold_160000107 I 0.800
fgenesh2_pg.scaffold_160000114 Branchiostoma floridae fgenesh2_pg.scaffold_160000114 I 0.800
GB49901 Apis mellifera GB49901 I 0.821
GB49914 Apis mellifera GB49914 I 0.813
ISCW005884 Ixodes scapularis ISCW005884 I 0.797
ISCW017921 Ixodes scapularis ISCW017921 I 0.797
KGM_20290 Danaus plexippus KGM_20290 I 0.811
L798_02529 Zootermopsis nevadensis L798_02529 I 0.801
L798_02536 Zootermopsis nevadensis L798_02536 I 0.821
LCUP002070 Lucilia cuprina LCUP002070 I 0.821
LCUP002077 Lucilia cuprina LCUP002077 I 0.811
MCINX006060 Melitaea cinxia MCINX006060 I 0.811
MDOA005526 Musca domestica MDOA005526 I 0.821
MDOA011451 Musca domestica MDOA011451 I 0.811
NV12185 Nasonia vitripennis NV12185 I 0.813
NV12189 Nasonia vitripennis NV12189 I 0.818
PHUM125070 Pediculus humanus PHUM125070 I 0.804
PHUM125080 Pediculus humanus PHUM125080 I 0.806
PHUM445550 Pediculus humanus PHUM445550 I 0.821
Sakowv30016612m.g Saccoglossus kowalevskii Sakowv30016612m.g I 0.790
SINV17987 Solenopsis invicta SINV17987 I 0.813
SINV18115 Solenopsis invicta SINV18115 I 0.821
SMAR002904 Strigamia maritima SMAR002904 I 0.785
SMAR005255 Strigamia maritima SMAR005255 I 0.797
SPU_024877 Strongylocentrotus purpuratus SPU_024877 I 0.782
TC005784 Tribolium castaneum TC005784 I 0.821
TC005788 Tribolium castaneum TC005788 I 0.811
tetur09g03230 Tetranychus urticae tetur09g03230 I 0.784
XP_002934454 Xenopus tropicalis XP_002934454 I 0.793
YQE_05719 Dendroctonus ponderosae YQE_05719 I 0.811