BCL6 (Bos taurus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSBTAG00000001511 T087707_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL6
M00228_2.00 		Homo sapiens
NNVNDVRANN
NNTYBHNBNN		 PBM
Barrera et al.(2016)
BCL6_REF 		0.827 1.000
BCL6
M04424_2.00 		Homo sapiens
NYGCTTTCKAGGAAHN
NDTTCCTMGAAAGCRN		 SELEX
Yin et al.(2017)
BCL6_eDBD_HT-SELEX_1 		0.827 1.000
BCL6
M04425_2.00 		Homo sapiens
NDTTCCTMGAWWRCVN
NBGYWWTCKAGGAAHN		 SELEX
Yin et al.(2017)
BCL6_eDBD_HT-SELEX_2 		0.827 1.000
Bcl6
M08097_2.00 		Mus musculus
NDCYYTCYAGGAAN
NTTCCTRGARRGHN		 ChIP-seq
Mathelier et al.(2014)
MA0463.1 		0.827 1.000
Bcl6
M08024_2.00 		Mus musculus
HYNBHHWBWSHTCHYNYYYYYYNBYYHYYH
DRRDRRVNRRRRRRNRDGADSWVWDDVNRD		 ChIP-seq
Chen et al.(2011)
SRP001843_Bcl6_IgG_LPSstim 		0.827 1.000
BCL6
M08877_2.00 		Homo sapiens
NNMYYTCYAGGAA
TTCCTRGARRKNN		 Misc
Kulakovskiy et al.(2013)
BCL6_HUMAN.H11MO.0.A 		0.827 1.000
Bcl6
M08972_2.00 		Mus musculus
NNMTYTCYAGGAA
TTCCTRGARAKNN		 Misc
Kulakovskiy et al.(2013)
BCL6_MOUSE.H11MO.0.A 		0.827 1.000
Bcl6
M09513_2.00 		Mus musculus
NNNNYTTCYWGGAAN
NTTCCWRGAARNNNN		 Misc
Heinz et al.(2010)
Liver-Bcl6_GSE31578 		0.827 1.000
BCL6
M10180_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL6_01 		0.827 1.000
BCL6
M10181_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL6_02 		0.827 1.000
BCL6
M10182_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL6_Q3_01 		0.827 1.000
BCL6
M10183_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL6_Q3 		0.827 1.000
BCL6
M10184_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL6_Q6 		0.827 1.000
BCL6
M04426_2.00 		Homo sapiens
NTGCTTTCTAGGAAHN
NDTTCCTAGAAAGCAN		 SELEX
Yin et al.(2017)
BCL6_eDBD_Methyl-HT-SELEX_1 		0.827 1.000
BCL6
M04427_2.00 		Homo sapiens
NDTTCCTMGAWWRCVN
NBGYWWTCKAGGAAHN		 SELEX
Yin et al.(2017)
BCL6_eDBD_Methyl-HT-SELEX_2 		0.827 1.000
BCL6
M00227_2.00 		Homo sapiens
NTAATTRWNN
NNWYAATTAN		 PBM
Barrera et al.(2016)
BCL6_H676Y 		0.821 0.964
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000001978 C2H2 ZF 518 541
ENSBTAP00000001978 C2H2 ZF 546 568
ENSBTAP00000001978 C2H2 ZF 574 596
ENSBTAP00000001978 C2H2 ZF 602 624
ENSBTAP00000001978 C2H2 ZF 630 652
ENSBTAP00000001978 C2H2 ZF 658 681

Links

Other C2H2 ZF family TFs
Other Bos taurus TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29801.m003200 Ricinus communis 29801.m003200 N 0.000
Aquca_016_00429 Aquilegia coerulea Aquca_016_00429 N 0.000
AT3G19184 Arabidopsis thaliana AT3G19184 N 0.000
BGIOSGA022464 Oryza indica BGIOSGA022464 N 0.000
Bo6g124000 Brassica oleracea Bo6g124000 N 0.000
Bostr.19424s0744 Boechera stricta Bostr.19424s0744 N 0.000
Bra035129 Brassica rapa Bra035129 N 0.000
BRADI1G45517 Brachypodium distachyon BRADI1G45517 N 0.000
Cagra.5742s0010 Capsella grandiflora Cagra.5742s0010 N 0.000
Carubv10014420m.g Capsella rubella Carubv10014420m.g N 0.000
Ciclev10029072m.g Citrus clementina Ciclev10029072m.g N 0.000
Cla016258 Citrullus lanatus Cla016258 N 0.000
Cucsa.219930 Cucumis sativus Cucsa.219930 N 0.000
evm.TU.supercontig_62.23 Carica papaya evm.TU.supercontig_62.23 N 0.000
F775_06135 Aegilops tauschii F775_06135 N 0.000
fgenesh2_kg.3__2134__AT3G19184.1 Arabidopsis lyrata fgenesh2_kg.3__2134__AT3G19184.1 N 0.000
Gorai.002G131600 Gossypium raimondii Gorai.002G131600 N 0.000
Gorai.013G042700 Gossypium raimondii Gorai.013G042700 N 0.000
GRMZM2G173321 Zea mays GRMZM2G173321 N 0.000
LPERR06G05590 Leersia perrieri LPERR06G05590 N 0.000
Lus10014044.g Linum usitatissimum Lus10014044.g N 0.000
Lus10019870.g Linum usitatissimum Lus10019870.g N 0.000
MTR_3g101520 Medicago truncatula MTR_3g101520 N 0.000
OB06G15600 Oryza brachyantha OB06G15600 N 0.000
OGLUM06G06330 Oryza glumaepatula OGLUM06G06330 N 0.000
OLONG_013315 Oryza longistaminata OLONG_013315 N 0.000
OMERI06G07230 Oryza meridionalis OMERI06G07230 N 0.000
ONIVA06G07020 Oryza nivara ONIVA06G07020 N 0.000
orange1.1g036915m.g Citrus sinensis orange1.1g036915m.g N 0.000
ORGLA06G0055700 Oryza glaberrima ORGLA06G0055700 N 0.000
ORUFI06G06290 Oryza rufipogon ORUFI06G06290 N 0.000
OS06G0194400 Oryza sativa OS06G0194400 N 0.000
PGSC0003DMG400025792 Solanum tuberosum PGSC0003DMG400025792 N 0.000
PK09561.1 Cannabis sativa PK09561.1 N 0.000
PK25650.1 Cannabis sativa PK25650.1 N 0.000
Pm005256 Prunus mume Pm005256 N 0.000
POPTR_0009s10590 Populus trichocarpa POPTR_0009s10590 N 0.000
PRUPE_ppb024440mg Prunus persica PRUPE_ppb024440mg N 0.000
SapurV1A.0090s0770 Salix purpurea SapurV1A.0090s0770 N 0.000
Sb07g006170 Sorghum bicolor Sb07g006170 N 0.000
Si014404m.g Setaria italica Si014404m.g N 0.000
Solyc01g108140.2 Solanum lycopersicum Solyc01g108140.2 N 0.000
TCM_007039 Theobroma cacao TCM_007039 N 0.000
TCM_033870 Theobroma cacao TCM_033870 N 0.000
Thhalv10019015m.g Eutrema salsugineum Thhalv10019015m.g N 0.000
Traes_7BS_9D1E05CB7 Triticum aestivum Traes_7BS_9D1E05CB7 N 0.000
Traes_7DS_A234A13E1 Triticum aestivum Traes_7DS_A234A13E1 N 0.000
VIT_03s0063g00620 Vitis vinifera VIT_03s0063g00620 N 0.000