Mecom (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000012645 T108974_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Mecom
M02667_2.00 		Mus musculus
KNTTATCTTRTCTH
DAGAYAAGATAANM		 SELEX
Mathelier et al.(2014)
MA0029.1 		0.827 1.000
Mecom
M08980_2.00 		Mus musculus
HNTNTTATCTTRTCWN
NWGAYAAGATAANAND		 Misc
Kulakovskiy et al.(2013)
EVI1_MOUSE.H11MO.0.B 		0.827 1.000
MECOM
M08862_2.00 		Homo sapiens
HNTNTTATCTTRTCWN
NWGAYAAGATAANAND		 Misc
Kulakovskiy et al.(2013)
EVI1_HUMAN.H11MO.0.B 		0.822 0.982
MECOM
M10125_2.00 		Homo sapiens
TTATCTTATCTTRTCW
WGAYAAGATAAGATAA		 Transfac
Matys et al.(2006)
V$EVI1_01 		0.822 0.982
MECOM
M10126_2.00 		Homo sapiens
TTATCTTRTCH
DGAYAAGATAA		 Transfac
Matys et al.(2006)
V$EVI1_02 		0.822 0.982
MECOM
M10127_2.00 		Homo sapiens
TTATCTTATCT
AGATAAGATAA		 Transfac
Matys et al.(2006)
V$EVI1_03 		0.822 0.982
MECOM
M10128_2.00 		Homo sapiens
TAWYYWDWYHTATYH
DRATADRAHWRRAWA		 Transfac
Matys et al.(2006)
V$EVI1_04 		0.822 0.982
MECOM
M10129_2.00 		Homo sapiens
HTATCTTATCT
AGATAAGATAD		 Transfac
Matys et al.(2006)
V$EVI1_05 		0.822 0.982
MECOM
M10130_2.00 		Homo sapiens
TTATCTTGT
ACAAGATAA		 Transfac
Matys et al.(2006)
V$EVI1_06 		0.822 0.982
MECOM
M10131_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EVI1_Q3 		0.822 0.982
MECOM
M10132_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EVI_Q6 		0.822 0.982
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000060380 C2H2 ZF 21 42
ENSRNOP00000060380 C2H2 ZF 76 97
ENSRNOP00000060380 C2H2 ZF 103 125
ENSRNOP00000060380 C2H2 ZF 131 154
ENSRNOP00000060380 C2H2 ZF 160 182
ENSRNOP00000060380 C2H2 ZF 188 210
ENSRNOP00000060380 C2H2 ZF 217 238
ENSRNOP00000060380 C2H2 ZF 733 755
ENSRNOP00000060380 C2H2 ZF 761 784
ENSRNOP00000060380 C2H2 ZF 790 812

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R014069 Calypte anna Aan_R014069 I 0.818
Afo_R003945 Aptenodytes forsteri Afo_R003945 I 0.818
B7ZRM8 Xenopus laevis B7ZRM8 I 0.761
B7ZRU9 Xenopus laevis B7ZRU9 I 0.779
Brh_R009954 Buceros rhinoceros Brh_R009954 I 0.818
Cmyd_10009299 Chelonia mydas Cmyd_10009299 I 0.795
MECOM Anolis carolinensis ENSACAG00000015620 I 0.812
ENSAMEG00000002052 Ailuropoda melanoleuca ENSAMEG00000002052 I 0.822
ENSAPLG00000012134 Anas platyrhynchos ENSAPLG00000012134 I 0.818
MECOM Bos taurus ENSBTAG00000005871 I 0.822
MECOM Canis familiaris ENSCAFG00000014621 I 0.822
MECOM Callithrix jacchus ENSCJAG00000002651 I 0.822
MECOM Cavia porcellus ENSCPOG00000013572 I 0.818
ENSCSAG00000012539 Chlorocebus sabaeus ENSCSAG00000012539 I 0.799
MECOM Dasypus novemcinctus ENSDNOG00000007746 I 0.822
MECOM Equus caballus ENSECAG00000020788 I 0.822
ENSFALG00000008636 Ficedula albicollis ENSFALG00000008636 I 0.818
MECOM Felis catus ENSFCAG00000012665 I 0.822
MECOM Homo sapiens ENSG00000085276 D 0.822
ENSGALG00000009437 Gallus gallus ENSGALG00000009437 I 0.818
MECOM Gorilla gorilla ENSGGOG00000013086 I 0.822
ENSLACG00000017233 Latimeria chalumnae ENSLACG00000017233 I 0.787
MECOM Loxodonta africana ENSLAFG00000011479 I 0.822
ENSLOCG00000009557 Lepisosteus oculatus ENSLOCG00000009557 I 0.772
MECOM Meleagris gallopavo ENSMGAG00000010302 I 0.818
MECOM Myotis lucifugus ENSMLUG00000015749 I 0.822
MECOM Macaca mulatta ENSMMUG00000002242 I 0.800
ENSMMUP00000002995 Macaca fascicularis ENSMMUP00000002995 I 0.800
MECOM Monodelphis domestica ENSMODG00000016133 I 0.811
ENSMPUG00000017083 Mustela putorius furo ENSMPUG00000017083 I 0.822
Mecom Mus musculus ENSMUSG00000027684 D 0.827
ENSNLEG00000004964 Nomascus leucogenys ENSNLEG00000004964 I 0.822
MECOM Ornithorhynchus anatinus ENSOANG00000007585 I 0.795
ENSOARG00000000899 Ovis aries ENSOARG00000000899 I 0.822
MECOM Oryctolagus cuniculus ENSOCUG00000010171 I 0.822
MECOM Otolemur garnettii ENSOGAG00000012812 I 0.822
ENSP00000417899-D1 Bos grunniens ENSP00000417899-D1 I 0.822
ENSPANG00000001637 Papio anubis ENSPANG00000001637 I 0.800
ENSPFOG00000011975 Poecilia formosa ENSPFOG00000011975 I 0.758
ENSPPYG00000014277 Pongo abelii ENSPPYG00000014277 I 0.822
ENSPSIG00000004908 Pelodiscus sinensis ENSPSIG00000004908 I 0.789
MECOM Pan troglodytes ENSPTRG00000015601 I 0.822
ENSSHAG00000017530 Sarcophilus harrisii ENSSHAG00000017530 I 0.818
ENSTGUG00000011015 Taeniopygia guttata ENSTGUG00000011015 I 0.818
MECOM Tursiops truncatus ENSTTRG00000002158 I 0.822
ENSXMAG00000010745 Xiphophorus maculatus ENSXMAG00000010745 I 0.758
Gfo_R004540 Geospiza fortis Gfo_R004540 I 0.818
Myotis_brandtii_MECOM_10024770 Myotis brandtii Myotis_brandtii_MECOM_10024770 I 0.822
Pvit_19180 Pogona vitticeps Pvit_19180 I 0.812
Tal_R005471 Tyto alba Tal_R005471 I 0.818
mecom.S Xenopus laevis XB-GENE-6448217 I 0.761
mecom.L Xenopus laevis XB-GENE-980198 I 0.779