Pvit_19180 (Pogona vitticeps)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pvit_19180 T137551_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MECOM
M08862_2.00 		Homo sapiens
HNTNTTATCTTRTCWN
NWGAYAAGATAANAND		 Misc
Kulakovskiy et al.(2013)
EVI1_HUMAN.H11MO.0.B 		0.817 0.982
MECOM
M10125_2.00 		Homo sapiens
TTATCTTATCTTRTCW
WGAYAAGATAAGATAA		 Transfac
Matys et al.(2006)
V$EVI1_01 		0.817 0.982
MECOM
M10126_2.00 		Homo sapiens
TTATCTTRTCH
DGAYAAGATAA		 Transfac
Matys et al.(2006)
V$EVI1_02 		0.817 0.982
MECOM
M10127_2.00 		Homo sapiens
TTATCTTATCT
AGATAAGATAA		 Transfac
Matys et al.(2006)
V$EVI1_03 		0.817 0.982
MECOM
M10128_2.00 		Homo sapiens
TAWYYWDWYHTATYH
DRATADRAHWRRAWA		 Transfac
Matys et al.(2006)
V$EVI1_04 		0.817 0.982
MECOM
M10129_2.00 		Homo sapiens
HTATCTTATCT
AGATAAGATAD		 Transfac
Matys et al.(2006)
V$EVI1_05 		0.817 0.982
MECOM
M10130_2.00 		Homo sapiens
TTATCTTGT
ACAAGATAA		 Transfac
Matys et al.(2006)
V$EVI1_06 		0.817 0.982
MECOM
M10131_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EVI1_Q3 		0.817 0.982
MECOM
M10132_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EVI_Q6 		0.817 0.982
Mecom
M02667_2.00 		Mus musculus
KNTTATCTTRTCTH
DAGAYAAGATAANM		 SELEX
Mathelier et al.(2014)
MA0029.1 		0.812 0.969
Mecom
M08980_2.00 		Mus musculus
HNTNTTATCTTRTCWN
NWGAYAAGATAANAND		 Misc
Kulakovskiy et al.(2013)
EVI1_MOUSE.H11MO.0.B 		0.812 0.969
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_19180 C2H2 ZF 198 219
Pvit_19180 C2H2 ZF 252 274
Pvit_19180 C2H2 ZF 280 302
Pvit_19180 C2H2 ZF 308 331
Pvit_19180 C2H2 ZF 337 359
Pvit_19180 C2H2 ZF 365 387
Pvit_19180 C2H2 ZF 394 415
Pvit_19180 C2H2 ZF 903 925
Pvit_19180 C2H2 ZF 931 954
Pvit_19180 C2H2 ZF 960 982

Links

Other C2H2 ZF family TFs
Other Pogona vitticeps TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MECOM Anolis carolinensis ENSACAG00000015620 I 0.827
ENSAPLG00000012134 Anas platyrhynchos ENSAPLG00000012134 I 0.821
ENSGALG00000009437 Gallus gallus ENSGALG00000009437 I 0.821
MECOM Meleagris gallopavo ENSMGAG00000010302 I 0.821
ENSSHAG00000017530 Sarcophilus harrisii ENSSHAG00000017530 I 0.821
ENSTGUG00000011015 Taeniopygia guttata ENSTGUG00000011015 I 0.821
Aan_R014069 Calypte anna Aan_R014069 I 0.821
Afo_R003945 Aptenodytes forsteri Afo_R003945 I 0.821
Brh_R009954 Buceros rhinoceros Brh_R009954 I 0.821
Tal_R005471 Tyto alba Tal_R005471 I 0.821
ENSAMEG00000002052 Ailuropoda melanoleuca ENSAMEG00000002052 I 0.817
MECOM Bos taurus ENSBTAG00000005871 I 0.817
MECOM Canis familiaris ENSCAFG00000014621 I 0.817
MECOM Callithrix jacchus ENSCJAG00000002651 I 0.817
MECOM Cavia porcellus ENSCPOG00000013572 I 0.817
MECOM Dasypus novemcinctus ENSDNOG00000007746 I 0.817
MECOM Equus caballus ENSECAG00000020788 I 0.817
ENSFALG00000008636 Ficedula albicollis ENSFALG00000008636 I 0.817
MECOM Felis catus ENSFCAG00000012665 I 0.817
MECOM Homo sapiens ENSG00000085276 D 0.817
MECOM Gorilla gorilla ENSGGOG00000013086 I 0.817
MECOM Loxodonta africana ENSLAFG00000011479 I 0.817
MECOM Myotis lucifugus ENSMLUG00000015749 I 0.817
ENSMPUG00000017083 Mustela putorius furo ENSMPUG00000017083 I 0.817
ENSNLEG00000004964 Nomascus leucogenys ENSNLEG00000004964 I 0.817
ENSOARG00000000899 Ovis aries ENSOARG00000000899 I 0.817
MECOM Oryctolagus cuniculus ENSOCUG00000010171 I 0.817
MECOM Otolemur garnettii ENSOGAG00000012812 I 0.817
ENSPPYG00000014277 Pongo abelii ENSPPYG00000014277 I 0.817
MECOM Pan troglodytes ENSPTRG00000015601 I 0.817
MECOM Tursiops truncatus ENSTTRG00000002158 I 0.817
ENSP00000417899-D1 Bos grunniens ENSP00000417899-D1 I 0.817
Gfo_R004540 Geospiza fortis Gfo_R004540 I 0.817
Myotis_brandtii_MECOM_10024770 Myotis brandtii Myotis_brandtii_MECOM_10024770 I 0.817
MECOM Monodelphis domestica ENSMODG00000016133 I 0.814
Mecom Mus musculus ENSMUSG00000027684 D 0.812
Mecom Rattus norvegicus ENSRNOG00000012645 I 0.812
ENSPSIG00000004908 Pelodiscus sinensis ENSPSIG00000004908 I 0.804
MECOM Ornithorhynchus anatinus ENSOANG00000007585 I 0.798
Cmyd_10009299 Chelonia mydas Cmyd_10009299 I 0.798
ENSLACG00000017233 Latimeria chalumnae ENSLACG00000017233 I 0.796
MECOM Macaca mulatta ENSMMUG00000002242 I 0.795
ENSPANG00000001637 Papio anubis ENSPANG00000001637 I 0.795
ENSMMUP00000002995 Macaca fascicularis ENSMMUP00000002995 I 0.795
ENSCSAG00000012539 Chlorocebus sabaeus ENSCSAG00000012539 I 0.794
B7ZRU9 Xenopus laevis B7ZRU9 I 0.784
mecom.L Xenopus laevis XB-GENE-980198 I 0.784
ENSLOCG00000009557 Lepisosteus oculatus ENSLOCG00000009557 I 0.777
ENSPFOG00000011975 Poecilia formosa ENSPFOG00000011975 I 0.769
ENSXMAG00000010745 Xiphophorus maculatus ENSXMAG00000010745 I 0.769
B7ZRM8 Xenopus laevis B7ZRM8 I 0.766
mecom.S Xenopus laevis XB-GENE-6448217 I 0.766