mecom.S (Xenopus laevis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 XB-GENE-6448217 T145569_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MECOM
M08862_2.00 		Homo sapiens
HNTNTTATCTTRTCWN
NWGAYAAGATAANAND		 Misc
Kulakovskiy et al.(2013)
EVI1_HUMAN.H11MO.0.B 		0.767 0.943
MECOM
M10125_2.00 		Homo sapiens
TTATCTTATCTTRTCW
WGAYAAGATAAGATAA		 Transfac
Matys et al.(2006)
V$EVI1_01 		0.767 0.943
MECOM
M10126_2.00 		Homo sapiens
TTATCTTRTCH
DGAYAAGATAA		 Transfac
Matys et al.(2006)
V$EVI1_02 		0.767 0.943
MECOM
M10127_2.00 		Homo sapiens
TTATCTTATCT
AGATAAGATAA		 Transfac
Matys et al.(2006)
V$EVI1_03 		0.767 0.943
MECOM
M10128_2.00 		Homo sapiens
TAWYYWDWYHTATYH
DRATADRAHWRRAWA		 Transfac
Matys et al.(2006)
V$EVI1_04 		0.767 0.943
MECOM
M10129_2.00 		Homo sapiens
HTATCTTATCT
AGATAAGATAD		 Transfac
Matys et al.(2006)
V$EVI1_05 		0.767 0.943
MECOM
M10130_2.00 		Homo sapiens
TTATCTTGT
ACAAGATAA		 Transfac
Matys et al.(2006)
V$EVI1_06 		0.767 0.943
MECOM
M10131_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EVI1_Q3 		0.767 0.943
MECOM
M10132_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EVI_Q6 		0.767 0.943
Mecom
M02667_2.00 		Mus musculus
KNTTATCTTRTCTH
DAGAYAAGATAANM		 SELEX
Mathelier et al.(2014)
MA0029.1 		0.761 0.925
Mecom
M08980_2.00 		Mus musculus
HNTNTTATCTTRTCWN
NWGAYAAGATAANAND		 Misc
Kulakovskiy et al.(2013)
EVI1_MOUSE.H11MO.0.B 		0.761 0.925
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAI70222 C2H2 ZF 21 42
AAI70222 C2H2 ZF 75 97
AAI70222 C2H2 ZF 103 125
AAI70222 C2H2 ZF 131 155
AAI70222 C2H2 ZF 161 183
AAI70222 C2H2 ZF 189 211
AAI70222 C2H2 ZF 218 239
AAI70222 C2H2 ZF 731 753
AAI70222 C2H2 ZF 759 782
AAI70222 C2H2 ZF 788 810

Links

Other C2H2 ZF family TFs
Other Xenopus laevis TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
B7ZRM8 Xenopus laevis B7ZRM8 I 0.827
B7ZRU9 Xenopus laevis B7ZRU9 I 0.807
mecom.L Xenopus laevis XB-GENE-980198 I 0.807
ENSLOCG00000009557 Lepisosteus oculatus ENSLOCG00000009557 I 0.773
MECOM Anolis carolinensis ENSACAG00000015620 I 0.767
ENSAMEG00000002052 Ailuropoda melanoleuca ENSAMEG00000002052 I 0.767
MECOM Callithrix jacchus ENSCJAG00000002651 I 0.767
MECOM Felis catus ENSFCAG00000012665 I 0.767
MECOM Homo sapiens ENSG00000085276 D 0.767
MECOM Gorilla gorilla ENSGGOG00000013086 I 0.767
ENSNLEG00000004964 Nomascus leucogenys ENSNLEG00000004964 I 0.767
ENSPSIG00000004908 Pelodiscus sinensis ENSPSIG00000004908 I 0.767
ENSSHAG00000017530 Sarcophilus harrisii ENSSHAG00000017530 I 0.767
ENSAPLG00000012134 Anas platyrhynchos ENSAPLG00000012134 I 0.766
MECOM Bos taurus ENSBTAG00000005871 I 0.766
MECOM Canis familiaris ENSCAFG00000014621 I 0.766
MECOM Cavia porcellus ENSCPOG00000013572 I 0.766
ENSCSAG00000012539 Chlorocebus sabaeus ENSCSAG00000012539 I 0.766
MECOM Dasypus novemcinctus ENSDNOG00000007746 I 0.766
MECOM Equus caballus ENSECAG00000020788 I 0.766
ENSFALG00000008636 Ficedula albicollis ENSFALG00000008636 I 0.766
ENSGALG00000009437 Gallus gallus ENSGALG00000009437 I 0.766
MECOM Loxodonta africana ENSLAFG00000011479 I 0.766
MECOM Meleagris gallopavo ENSMGAG00000010302 I 0.766
MECOM Myotis lucifugus ENSMLUG00000015749 I 0.766
ENSMPUG00000017083 Mustela putorius furo ENSMPUG00000017083 I 0.766
ENSOARG00000000899 Ovis aries ENSOARG00000000899 I 0.766
MECOM Oryctolagus cuniculus ENSOCUG00000010171 I 0.766
MECOM Otolemur garnettii ENSOGAG00000012812 I 0.766
ENSPPYG00000014277 Pongo abelii ENSPPYG00000014277 I 0.766
MECOM Pan troglodytes ENSPTRG00000015601 I 0.766
ENSTGUG00000011015 Taeniopygia guttata ENSTGUG00000011015 I 0.766
MECOM Tursiops truncatus ENSTTRG00000002158 I 0.766
Aan_R014069 Calypte anna Aan_R014069 I 0.766
Afo_R003945 Aptenodytes forsteri Afo_R003945 I 0.766
Brh_R009954 Buceros rhinoceros Brh_R009954 I 0.766
Cmyd_10009299 Chelonia mydas Cmyd_10009299 I 0.766
ENSP00000417899-D1 Bos grunniens ENSP00000417899-D1 I 0.766
Gfo_R004540 Geospiza fortis Gfo_R004540 I 0.766
Myotis_brandtii_MECOM_10024770 Myotis brandtii Myotis_brandtii_MECOM_10024770 I 0.766
Pvit_19180 Pogona vitticeps Pvit_19180 I 0.766
Tal_R005471 Tyto alba Tal_R005471 I 0.766
Mecom Mus musculus ENSMUSG00000027684 D 0.761
Mecom Rattus norvegicus ENSRNOG00000012645 I 0.761
MECOM Monodelphis domestica ENSMODG00000016133 I 0.760