Cmyd_10009299 (Chelonia mydas)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cmyd_10009299 T134331_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MECOM
M08862_2.00 		Homo sapiens
HNTNTTATCTTRTCWN
NWGAYAAGATAANAND		 Misc
Kulakovskiy et al.(2013)
EVI1_HUMAN.H11MO.0.B 		0.800 0.987
MECOM
M10125_2.00 		Homo sapiens
TTATCTTATCTTRTCW
WGAYAAGATAAGATAA		 Transfac
Matys et al.(2006)
V$EVI1_01 		0.800 0.987
MECOM
M10126_2.00 		Homo sapiens
TTATCTTRTCH
DGAYAAGATAA		 Transfac
Matys et al.(2006)
V$EVI1_02 		0.800 0.987
MECOM
M10127_2.00 		Homo sapiens
TTATCTTATCT
AGATAAGATAA		 Transfac
Matys et al.(2006)
V$EVI1_03 		0.800 0.987
MECOM
M10128_2.00 		Homo sapiens
TAWYYWDWYHTATYH
DRATADRAHWRRAWA		 Transfac
Matys et al.(2006)
V$EVI1_04 		0.800 0.987
MECOM
M10129_2.00 		Homo sapiens
HTATCTTATCT
AGATAAGATAD		 Transfac
Matys et al.(2006)
V$EVI1_05 		0.800 0.987
MECOM
M10130_2.00 		Homo sapiens
TTATCTTGT
ACAAGATAA		 Transfac
Matys et al.(2006)
V$EVI1_06 		0.800 0.987
MECOM
M10131_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EVI1_Q3 		0.800 0.987
MECOM
M10132_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EVI_Q6 		0.800 0.987
Mecom
M02667_2.00 		Mus musculus
KNTTATCTTRTCTH
DAGAYAAGATAANM		 SELEX
Mathelier et al.(2014)
MA0029.1 		0.795 0.974
Mecom
M08980_2.00 		Mus musculus
HNTNTTATCTTRTCWN
NWGAYAAGATAANAND		 Misc
Kulakovskiy et al.(2013)
EVI1_MOUSE.H11MO.0.B 		0.795 0.974
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10009299 C2H2 ZF 84 105
Cmyd_10009299 C2H2 ZF 138 160
Cmyd_10009299 C2H2 ZF 166 188
Cmyd_10009299 C2H2 ZF 194 217
Cmyd_10009299 C2H2 ZF 223 245
Cmyd_10009299 C2H2 ZF 251 273
Cmyd_10009299 C2H2 ZF 280 301
Cmyd_10009299 C2H2 ZF 787 809
Cmyd_10009299 C2H2 ZF 815 838
Cmyd_10009299 C2H2 ZF 844 866

Links

Other C2H2 ZF family TFs
Other Chelonia mydas TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSPSIG00000004908 Pelodiscus sinensis ENSPSIG00000004908 I 0.821
ENSAPLG00000012134 Anas platyrhynchos ENSAPLG00000012134 I 0.804
ENSGALG00000009437 Gallus gallus ENSGALG00000009437 I 0.804
MECOM Meleagris gallopavo ENSMGAG00000010302 I 0.804
ENSSHAG00000017530 Sarcophilus harrisii ENSSHAG00000017530 I 0.804
ENSTGUG00000011015 Taeniopygia guttata ENSTGUG00000011015 I 0.804
Aan_R014069 Calypte anna Aan_R014069 I 0.804
Afo_R003945 Aptenodytes forsteri Afo_R003945 I 0.804
Brh_R009954 Buceros rhinoceros Brh_R009954 I 0.804
Tal_R005471 Tyto alba Tal_R005471 I 0.804
ENSAMEG00000002052 Ailuropoda melanoleuca ENSAMEG00000002052 I 0.800
MECOM Bos taurus ENSBTAG00000005871 I 0.800
MECOM Canis familiaris ENSCAFG00000014621 I 0.800
MECOM Callithrix jacchus ENSCJAG00000002651 I 0.800
MECOM Cavia porcellus ENSCPOG00000013572 I 0.800
ENSCSAG00000012539 Chlorocebus sabaeus ENSCSAG00000012539 I 0.800
MECOM Dasypus novemcinctus ENSDNOG00000007746 I 0.800
MECOM Equus caballus ENSECAG00000020788 I 0.800
ENSFALG00000008636 Ficedula albicollis ENSFALG00000008636 I 0.800
MECOM Felis catus ENSFCAG00000012665 I 0.800
MECOM Homo sapiens ENSG00000085276 D 0.800
MECOM Gorilla gorilla ENSGGOG00000013086 I 0.800
MECOM Loxodonta africana ENSLAFG00000011479 I 0.800
MECOM Myotis lucifugus ENSMLUG00000015749 I 0.800
ENSMPUG00000017083 Mustela putorius furo ENSMPUG00000017083 I 0.800
ENSNLEG00000004964 Nomascus leucogenys ENSNLEG00000004964 I 0.800
ENSOARG00000000899 Ovis aries ENSOARG00000000899 I 0.800
MECOM Oryctolagus cuniculus ENSOCUG00000010171 I 0.800
MECOM Otolemur garnettii ENSOGAG00000012812 I 0.800
ENSPPYG00000014277 Pongo abelii ENSPPYG00000014277 I 0.800
MECOM Pan troglodytes ENSPTRG00000015601 I 0.800
MECOM Tursiops truncatus ENSTTRG00000002158 I 0.800
ENSP00000417899-D1 Bos grunniens ENSP00000417899-D1 I 0.800
Gfo_R004540 Geospiza fortis Gfo_R004540 I 0.800
Myotis_brandtii_MECOM_10024770 Myotis brandtii Myotis_brandtii_MECOM_10024770 I 0.800
MECOM Anolis carolinensis ENSACAG00000015620 I 0.798
Pvit_19180 Pogona vitticeps Pvit_19180 I 0.798
MECOM Monodelphis domestica ENSMODG00000016133 I 0.797
Mecom Mus musculus ENSMUSG00000027684 D 0.795
Mecom Rattus norvegicus ENSRNOG00000012645 I 0.795
B7ZRU9 Xenopus laevis B7ZRU9 I 0.784
mecom.L Xenopus laevis XB-GENE-980198 I 0.784
MECOM Ornithorhynchus anatinus ENSOANG00000007585 I 0.781
MECOM Macaca mulatta ENSMMUG00000002242 I 0.778
ENSPANG00000001637 Papio anubis ENSPANG00000001637 I 0.778
ENSMMUP00000002995 Macaca fascicularis ENSMMUP00000002995 I 0.778
ENSLOCG00000009557 Lepisosteus oculatus ENSLOCG00000009557 I 0.777
ENSLACG00000017233 Latimeria chalumnae ENSLACG00000017233 I 0.773
B7ZRM8 Xenopus laevis B7ZRM8 I 0.766
mecom.S Xenopus laevis XB-GENE-6448217 I 0.766
ENSPFOG00000011975 Poecilia formosa ENSPFOG00000011975 I 0.763
ENSXMAG00000010745 Xiphophorus maculatus ENSXMAG00000010745 I 0.763