LotgiG58520 (Lottia gigantea)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 LotgiG58520 T121797_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SCRT1
M02929_2.00 		Homo sapiens
RHKCAACAGGTGKNH
DNMCACCTGTTGMDY		 SELEX
Jolma et al.(2013)
SCRT1_1 		0.763 0.798
SCRT1
M04655_2.00 		Homo sapiens
NKCAACAGGTD
HACCTGTTGMN		 SELEX
Yin et al.(2017)
SCRT1_eDBD_HT-SELEX 		0.763 0.798
SCRT1
M08397_2.00 		Homo sapiens
RWKCAACAGGTG
CACCTGTTGMWY		 ChIP-seq
Schmitges et al.(2016)
Q9BWW7_1-4.RCADE 		0.763 0.798
SCRT1
M04656_2.00 		Homo sapiens
NGCRACAGGTD
HACCTGTYGCN		 SELEX
Yin et al.(2017)
SCRT1_eDBD_Methyl-HT-SELEX 		0.763 0.798
scrt
M03673_2.00 		Drosophila melanogaster
RHGCAACAGGTGK
MCACCTGTTGCDY		 SELEX
Nitta et al.(2015)
scrt_1 		0.761 0.789
scrt
M06085_2.00 		Drosophila melanogaster
MCCACCTGTTG
CAACAGGTGGK		 B1H
Zhu et al.(2011)
scrt_SANGER_2.5_FBgn0004880 		0.761 0.789
scrt
M06086_2.00 		Drosophila melanogaster
DNKCAACAGGTGK
MCACCTGTTGMNH		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_1_FBgn0004880 		0.761 0.789
scrt
M06087_2.00 		Drosophila melanogaster
VMCACCTGTTGMN
NKCAACAGGTGKB		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_2_FBgn0004880 		0.761 0.789
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LotgiP58520 C2H2 ZF 2 24
LotgiP58520 C2H2 ZF 33 55
LotgiP58520 C2H2 ZF 59 81
LotgiP58520 C2H2 ZF 87 109
LotgiP58520 C2H2 ZF 115 136

Links

Other C2H2 ZF family TFs
Other Lottia gigantea TFs

147 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL005176 Aedes aegypti AAEL005176 I 0.773
AAEL009230 Aedes aegypti AAEL009230 I 0.773
AAEL014359 Aedes aegypti AAEL014359 I 0.773
AATE010651 Anopheles atroparvus AATE010651 I 0.761
AATE020159 Anopheles atroparvus AATE020159 I 0.771
ACHR010032 Anopheles christyi ACHR010032 I 0.771
ACOM031677 Anopheles coluzzii ACOM031677 I 0.761
ACOM031685 Anopheles coluzzii ACOM031685 I 0.771
ACUA003488 Anopheles culicifacies ACUA003488 I 0.761
ACUA020861 Anopheles culicifacies ACUA020861 I 0.761
ACUA022497 Anopheles culicifacies ACUA022497 I 0.771
AFAF007486 Anopheles farauti AFAF007486 I 0.771
AFAF017001 Anopheles farauti AFAF017001 I 0.761
AFUN001835 Anopheles funestus AFUN001835 I 0.761
AFUN002786 Anopheles funestus AFUN002786 I 0.771
AGAP006791 Anopheles gambiae AGAP006791 I 0.771
AGAP006794 Anopheles gambiae AGAP006794 I 0.761
ALUE_0002049001 Ascaris lumbricoides ALUE_0002049001 I 0.766
AMEC013076 Anopheles melas AMEC013076 I 0.771
AMEC015586 Anopheles melas AMEC015586 I 0.761
AMEM013788 Anopheles merus AMEM013788 I 0.771
AMEM017035 Anopheles merus AMEM017035 I 0.761
AQUA003879 Anopheles quadriannulatus AQUA003879 I 0.771
ASIS012063 Anopheles sinensis ASIS012063 I 0.761
ASIS022059 Anopheles sinensis ASIS022059 I 0.771
ASTEI08595 Anopheles stephensi ASTEI08595 I 0.761
A_07725 Schistosoma haematobium A_07725 I 0.767
CapteG149623 Capitella teleta CapteG149623 I 0.766
CapteG176021 Capitella teleta CapteG176021 I 0.766
CapteG223614 Capitella teleta CapteG223614 I 0.774
CapteG76620 Capitella teleta CapteG76620 I 0.766
Cflo_09305--XP_001121064.1_APIME Camponotus floridanus Cflo_09305--XP_001121064.1_APIME I 0.764
CGI_10023711 Crassostrea gigas CGI_10023711 I 0.776
CLEC001353 Cimex lectularius CLEC001353 I 0.771
Cmyd_10009565 Chelonia mydas Cmyd_10009565 I 0.765
CPIJ004535 Culex quinquefasciatus CPIJ004535 I 0.763
CPIJ017517 Culex quinquefasciatus CPIJ017517 I 0.773
CpipJ_CPIJ004535 Culex pipiens CpipJ_CPIJ004535 I 0.763
CpipJ_CPIJ017517 Culex pipiens CpipJ_CPIJ017517 I 0.773
csin111588 Clonorchis sinensis csin111588 I 0.767
D915_06717 Fasciola hepatica D915_06717 I 0.767
D917_06340 Trichinella nativa D917_06340 I 0.759
D918_03987 Trichuris suis D918_03987 I 0.763
DAPPUDRAFT_14328 Daphnia pulex DAPPUDRAFT_14328 I 0.762
DME_0000421901 Dracunculus medinensis DME_0000421901 I 0.761
ECPE_0000958201 Echinostoma caproni ECPE_0000958201 I 0.767
EFV52761 Trichinella spiralis EFV52761 I 0.759
SCRT2 Anolis carolinensis ENSACAG00000016109 I 0.765
ENSAMEG00000005557 Ailuropoda melanoleuca ENSAMEG00000005557 I 0.763
ENSAMXG00000004776 Astyanax mexicanus ENSAMXG00000004776 I 0.763
ENSAPLG00000011730 Anas platyrhynchos ENSAPLG00000011730 I 0.765
SCRT1 Bos taurus ENSBTAG00000046208 I 0.763
SCRT1 Callithrix jacchus ENSCJAG00000021406 I 0.763
ENSCPOG00000024058 Cavia porcellus ENSCPOG00000024058 I 0.763
ENSCSAG00000008549 Chlorocebus sabaeus ENSCSAG00000008549 I 0.763
scrt1b Danio rerio ENSDARG00000040214 I 0.766
scrt1a Danio rerio ENSDARG00000100821 I 0.766
SCRT1 Dasypus novemcinctus ENSDNOG00000043826 I 0.763
ENSFALG00000005718 Ficedula albicollis ENSFALG00000005718 I 0.763
SCRT1 Homo sapiens ENSG00000261678 D 0.763
SCRT1 Gasterosteus aculeatus ENSGACG00000004072 I 0.763
scrt1b Gasterosteus aculeatus ENSGACG00000008982 I 0.761
scrt2 Gasterosteus aculeatus ENSGACG00000011802 I 0.756
SCRT2 Gallus gallus ENSGALG00000028912 I 0.765
SCRT1 Gorilla gorilla ENSGGOG00000013612 I 0.763
ENSGMOG00000000629 Gadus morhua ENSGMOG00000000629 I 0.763
ENSLACG00000003588 Latimeria chalumnae ENSLACG00000003588 I 0.766
SCRT1 Loxodonta africana ENSLAFG00000031587 I 0.763
ENSLOCG00000007573 Lepisosteus oculatus ENSLOCG00000007573 I 0.766
ENSMEUG00000009675 Macropus eugenii ENSMEUG00000009675 I 0.758
SCRT2 Meleagris gallopavo ENSMGAG00000016579 I 0.765
SCRT1 Macaca mulatta ENSMMUG00000028886 I 0.763
SCRT2 Monodelphis domestica ENSMODG00000019528 I 0.758
Scrt1 Mus musculus ENSMUSG00000048385 I 0.763
ENSOARG00000014008 Ovis aries ENSOARG00000014008 I 0.763
SCRT1 Otolemur garnettii ENSOGAG00000026538 I 0.763
ENSONIG00000006007 Oreochromis niloticus ENSONIG00000006007 I 0.763
ENSONIG00000019809 Oreochromis niloticus ENSONIG00000019809 I 0.763
scrt1b Oryzias latipes ENSORLG00000008641 I 0.763
ENSPANG00000017232 Papio anubis ENSPANG00000017232 I 0.763
ENSPFOG00000005616 Poecilia formosa ENSPFOG00000005616 I 0.763
ENSPFOG00000017719 Poecilia formosa ENSPFOG00000017719 I 0.763
Scrt1 Rattus norvegicus ENSRNOG00000025594 I 0.763
ENSSHAG00000001992 Sarcophilus harrisii ENSSHAG00000001992 I 0.761
SCRT1 Sus scrofa ENSSSCG00000025879 I 0.763
ENSSTOG00000023184 Ictidomys tridecemlineatus ENSSTOG00000023184 I 0.763
SCRT2 Taeniopygia guttata ENSTGUG00000006801 I 0.765
scrt1b Tetraodon nigroviridis ENSTNIG00000018384 I 0.763
scrt1b Takifugu rubripes ENSTRUG00000011637 I 0.763
SCRT1 Takifugu rubripes ENSTRUG00000012719 I 0.763
ENSXMAG00000014491 Xiphophorus maculatus ENSXMAG00000014491 I 0.763
ENSXMAG00000015353 Xiphophorus maculatus ENSXMAG00000015353 I 0.763
estExt_fgenesh2_pm.C_2290002 Branchiostoma floridae estExt_fgenesh2_pm.C_2290002 I 0.764
EVEC_0000710001 Enterobius vermicularis EVEC_0000710001 I 0.766
scrt Drosophila melanogaster FBgn0004880 D 0.761
GF25020 Drosophila ananassae FBgn0102012 I 0.761
GG15174 Drosophila erecta FBgn0107427 I 0.761
GH15771 Drosophila grimshawi FBgn0123242 I 0.761
GI12551 Drosophila mojavensis FBgn0135308 I 0.761
GM11368 Drosophila sechellia FBgn0166311 I 0.761
GM14603 Drosophila sechellia FBgn0169524 I 0.761
GD13794 Drosophila simulans FBgn0185494 I 0.761
GJ16103 Drosophila virilis FBgn0203288 I 0.761
GK17507 Drosophila willistoni FBgn0219506 I 0.761
GE21392 Drosophila yakuba FBgn0238652 I 0.761
HHAL001092-PA Halyomorpha halys HHAL001092-PA I 0.771
HHAL001095-PA Halyomorpha halys HHAL001095-PA I 0.771
ISCW021315 Ixodes scapularis ISCW021315 I 0.763
L596_g15116 Steinernema carpocapsae L596_g15116 I 0.768
L798_11766 Zootermopsis nevadensis L798_11766 I 0.761
L889_g21793 Steinernema feltiae L889_g21793 I 0.765
L892_g9690 Steinernema scapterisci L892_g9690 I 0.768
L893_g27175 Steinernema glaseri L893_g27175 I 0.773
L898_g5709 Steinernema monticolum L898_g5709 I 0.767
LCUP005780 Lucilia cuprina LCUP005780 I 0.761
LLOJ003272 Lutzomyia longipalpis LLOJ003272 I 0.761
MDOA005810 Musca domestica MDOA005810 I 0.761
MESCA005876 Megaselia scalaris MESCA005876 I 0.759
nRc.2.0.1.g22231 Romanomermis culicivorax nRc.2.0.1.g22231 I 0.761
Ocbimv22039583m.g Octopus bimaculoides Ocbimv22039583m.g I 0.774
Ogr05737 Ophisaurus gracilis Ogr05737 I 0.761
PHUM474180 Pediculus humanus PHUM474180 I 0.761
PPAI000594 Phlebotomus papatasi PPAI000594 I 0.771
PTRK_0000719800 Parastrongyloides trichosuri PTRK_0000719800 I 0.766
Pvit_17685 Pogona vitticeps Pvit_17685 I 0.758
PXEA_0002510801 Protopolystoma xenopodis PXEA_0002510801 I 0.762
RSKR_0000492900 Rhabditophanes kr3021 RSKR_0000492900 I 0.766
Sakowv30035375m.g Saccoglossus kowalevskii Sakowv30035375m.g I 0.766
SCUD_0000371801 Schistosoma curassoni SCUD_0000371801 I 0.767
Sjc_0100840 Schistosoma japonicum Sjc_0100840 I 0.767
SMAR010760 Strigamia maritima SMAR010760 I 0.761
Smp_054430 Schistosoma mansoni Smp_054430 I 0.767
SMRZ_0000904801 Schistosoma margrebowiei SMRZ_0000904801 I 0.767
SMTD_0000188801 Schistosoma mattheei SMTD_0000188801 I 0.767
SMU15013927 Schmidtea mediterranea SMU15013927 I 0.771
SMUV_0000843501 Syphacia muris SMUV_0000843501 I 0.766
SPAL_0000842500 Strongyloides papillosus SPAL_0000842500 I 0.766
SPU_018393 Strongylocentrotus purpuratus SPU_018393 I 0.763
SSTP_0000144900 Strongyloides stercoralis SSTP_0000144900 I 0.766
SVE_1799900 Strongyloides venezuelensis SVE_1799900 I 0.766
T265_09545 Opisthorchis viverrini T265_09545 I 0.767
TCNE_0000669301 Toxocara canis TCNE_0000669301 I 0.763
tetur08g05890 Tetranychus urticae tetur08g05890 I 0.765
TMUE_s0027002700 Trichuris muris TMUE_s0027002700 I 0.763
TRE_0000944501 Trichobilharzia regenti TRE_0000944501 I 0.767
TTRE_0000441701 Trichuris trichiura TTRE_0000441701 I 0.763
scrt2 Xenopus tropicalis XB-GENE-5995512 I 0.763