CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SPU_018393
(
Strongylocentrotus purpuratus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
SPU_018393
T129692_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CG12605
M03691_2.00
Drosophila melanogaster
RHGCAACAGGTGN
NCACCTGTTGCDY
SELEX
Nitta et al.(2015)
CG12605_1
0.793
0.825
CG12605
M06139_2.00
Drosophila melanogaster
CACCTGTKG
CMACAGGTG
B1H
Zhu et al.(2011)
CG12605_SANGER_10_FBgn0035481
0.793
0.825
CG12605
M06140_2.00
Drosophila melanogaster
MCACCTGTKGVNN
NNBCMACAGGTGK
B1H
Zhu et al.(2011)
CG12605_SOLEXA_5_FBgn0035481
0.793
0.825
SCRT1
M02929_2.00
Homo sapiens
RHKCAACAGGTGKNH
DNMCACCTGTTGMDY
SELEX
Jolma et al.(2013)
SCRT1_1
0.790
0.851
SCRT1
M04655_2.00
Homo sapiens
NKCAACAGGTD
HACCTGTTGMN
SELEX
Yin et al.(2017)
SCRT1_eDBD_HT-SELEX
0.790
0.851
SCRT1
M08397_2.00
Homo sapiens
RWKCAACAGGTG
CACCTGTTGMWY
ChIP-seq
Schmitges et al.(2016)
Q9BWW7_1-4.RCADE
0.790
0.851
SCRT1
M04656_2.00
Homo sapiens
NGCRACAGGTD
HACCTGTYGCN
SELEX
Yin et al.(2017)
SCRT1_eDBD_Methyl-HT-SELEX
0.790
0.851
scrt
M03673_2.00
Drosophila melanogaster
RHGCAACAGGTGK
MCACCTGTTGCDY
SELEX
Nitta et al.(2015)
scrt_1
0.790
0.842
scrt
M06085_2.00
Drosophila melanogaster
MCCACCTGTTG
CAACAGGTGGK
B1H
Zhu et al.(2011)
scrt_SANGER_2.5_FBgn0004880
0.790
0.842
scrt
M06086_2.00
Drosophila melanogaster
DNKCAACAGGTGK
MCACCTGTTGMNH
B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_1_FBgn0004880
0.790
0.842
scrt
M06087_2.00
Drosophila melanogaster
VMCACCTGTTGMN
NKCAACAGGTGKB
B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_2_FBgn0004880
0.790
0.842
SCRT2
M02925_2.00
Homo sapiens
RHGCAACAGGTGB
VCACCTGTTGCDY
SELEX
Jolma et al.(2013)
SCRT2_1
0.779
0.825
SCRT2
M04643_2.00
Homo sapiens
NGCAACAGGTD
HACCTGTTGCN
SELEX
Yin et al.(2017)
SCRT2_eDBD_HT-SELEX
0.779
0.825
SCRT2
M04644_2.00
Homo sapiens
NGCRACAGGTG
CACCTGTYGCN
SELEX
Yin et al.(2017)
SCRT2_eDBD_Methyl-HT-SELEX
0.779
0.825
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SPU_018393-tr
C2H2 ZF
163
185
YKCNECGKQYATSSNLSRHKQTH
SPU_018393-tr
C2H2 ZF
194
216
KKCEVCNKVYVSMPALAMHVLTH
SPU_018393-tr
C2H2 ZF
220
242
HKCNVCHKSFSRPWLLQGHMRSH
SPU_018393-tr
C2H2 ZF
248
270
FGCAHCGKAFADRSNLRAHMQTH
SPU_018393-tr
C2H2 ZF
276
297
YKCKRCDKSFALKSYLNKHYES
Links
Other
C2H2 ZF
family TFs
Other
Strongylocentrotus purpuratus
TFs
195 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMXG00000004776
Astyanax mexicanus
ENSAMXG00000004776
I
0.811
ENSGMOG00000000629
Gadus morhua
ENSGMOG00000000629
I
0.811
ENSONIG00000006007
Oreochromis niloticus
ENSONIG00000006007
I
0.811
scrt1b
Oryzias latipes
ENSORLG00000008641
I
0.811
ENSPFOG00000017719
Poecilia formosa
ENSPFOG00000017719
I
0.811
scrt1b
Tetraodon nigroviridis
ENSTNIG00000018384
I
0.811
scrt1b
Takifugu rubripes
ENSTRUG00000011637
I
0.811
ENSXMAG00000014491
Xiphophorus maculatus
ENSXMAG00000014491
I
0.811
SMAR010760
Strigamia maritima
SMAR010760
I
0.811
scrt1b
Danio rerio
ENSDARG00000040214
I
0.809
scrt1a
Danio rerio
ENSDARG00000100821
I
0.809
SCRT1
Gasterosteus aculeatus
ENSGACG00000004072
I
0.809
scrt1b
Gasterosteus aculeatus
ENSGACG00000008982
I
0.809
ENSLACG00000003588
Latimeria chalumnae
ENSLACG00000003588
I
0.809
ENSLOCG00000007573
Lepisosteus oculatus
ENSLOCG00000007573
I
0.809
ENSONIG00000019809
Oreochromis niloticus
ENSONIG00000019809
I
0.809
ENSPFOG00000005616
Poecilia formosa
ENSPFOG00000005616
I
0.809
SCRT1
Takifugu rubripes
ENSTRUG00000012719
I
0.809
ENSXMAG00000015353
Xiphophorus maculatus
ENSXMAG00000015353
I
0.809
SCRT2
Anolis carolinensis
ENSACAG00000016109
I
0.807
ENSFALG00000005718
Ficedula albicollis
ENSFALG00000005718
I
0.807
scrt2
Xenopus tropicalis
XB-GENE-5995512
I
0.807
ENSAPLG00000011730
Anas platyrhynchos
ENSAPLG00000011730
I
0.805
SCRT2
Gallus gallus
ENSGALG00000028912
I
0.805
SCRT2
Meleagris gallopavo
ENSMGAG00000016579
I
0.805
SCRT2
Taeniopygia guttata
ENSTGUG00000006801
I
0.805
Cmyd_10009565
Chelonia mydas
Cmyd_10009565
I
0.805
CGI_10023711
Crassostrea gigas
CGI_10023711
I
0.801
Sakowv30035375m.g
Saccoglossus kowalevskii
Sakowv30035375m.g
I
0.799
Ogr05737
Ophisaurus gracilis
Ogr05737
I
0.798
ISCW021315
Ixodes scapularis
ISCW021315
I
0.797
tetur08g05890
Tetranychus urticae
tetur08g05890
I
0.797
Pvit_17685
Pogona vitticeps
Pvit_17685
I
0.797
CpipJ_CPIJ004535
Culex pipiens
CpipJ_CPIJ004535
I
0.795
AGAP006794
Anopheles gambiae
AGAP006794
I
0.795
CPIJ004535
Culex quinquefasciatus
CPIJ004535
I
0.795
ENSLOCG00000002246
Lepisosteus oculatus
ENSLOCG00000002246
I
0.795
ENSMEUG00000009675
Macropus eugenii
ENSMEUG00000009675
I
0.795
SCRT2
Monodelphis domestica
ENSMODG00000019528
I
0.795
AATE010651
Anopheles atroparvus
AATE010651
I
0.795
ACOM031677
Anopheles coluzzii
ACOM031677
I
0.795
ACUA003488
Anopheles culicifacies
ACUA003488
I
0.795
ACUA020861
Anopheles culicifacies
ACUA020861
I
0.795
AFAF017001
Anopheles farauti
AFAF017001
I
0.795
AFUN001835
Anopheles funestus
AFUN001835
I
0.795
AMEC015586
Anopheles melas
AMEC015586
I
0.795
AMEM017035
Anopheles merus
AMEM017035
I
0.795
ASIS012063
Anopheles sinensis
ASIS012063
I
0.795
ASTEI08595
Anopheles stephensi
ASTEI08595
I
0.795
scrt2
Gasterosteus aculeatus
ENSGACG00000011802
I
0.794
Ocbimv22039583m.g
Octopus bimaculoides
Ocbimv22039583m.g
I
0.794
CG12605
Drosophila melanogaster
FBgn0035481
D
0.793
GA11715
Drosophila pseudoobscura
FBgn0071765
I
0.793
GF24781
Drosophila ananassae
FBgn0101774
I
0.793
GG14232
Drosophila erecta
FBgn0106493
I
0.793
GM14024
Drosophila sechellia
FBgn0168953
I
0.793
GD13304
Drosophila simulans
FBgn0185023
I
0.793
GD13305
Drosophila simulans
FBgn0185024
I
0.793
GK16692
Drosophila willistoni
FBgn0218694
I
0.793
GE20660
Drosophila yakuba
FBgn0237965
I
0.793
ENSAMXG00000018733
Astyanax mexicanus
ENSAMXG00000018733
I
0.792
scrt2
Danio rerio
ENSDARG00000056175
I
0.792
ENSGMOG00000019519
Gadus morhua
ENSGMOG00000019519
I
0.792
ENSONIG00000016758
Oreochromis niloticus
ENSONIG00000016758
I
0.792
scrt2
Oryzias latipes
ENSORLG00000015072
I
0.792
ENSPFOG00000007738
Poecilia formosa
ENSPFOG00000007738
I
0.792
scrt2
Tetraodon nigroviridis
ENSTNIG00000012473
I
0.792
scrt2
Takifugu rubripes
ENSTRUG00000007620
I
0.792
ENSXMAG00000011590
Xiphophorus maculatus
ENSXMAG00000011590
I
0.792
GI12763
Drosophila mojavensis
FBgn0135520
I
0.791
GJ16104
Drosophila virilis
FBgn0203289
I
0.791
estExt_fgenesh2_pm.C_2290002
Branchiostoma floridae
estExt_fgenesh2_pm.C_2290002
I
0.791
ENSAMEG00000005557
Ailuropoda melanoleuca
ENSAMEG00000005557
I
0.790
ENSAMXG00000018604
Astyanax mexicanus
ENSAMXG00000018604
I
0.790
SCRT1
Bos taurus
ENSBTAG00000046208
I
0.790
SCRT1
Callithrix jacchus
ENSCJAG00000021406
I
0.790
ENSCPOG00000024058
Cavia porcellus
ENSCPOG00000024058
I
0.790
ENSCSAG00000008549
Chlorocebus sabaeus
ENSCSAG00000008549
I
0.790
SCRT1
Dasypus novemcinctus
ENSDNOG00000043826
I
0.790
SCRT1
Homo sapiens
ENSG00000261678
D
0.790
SCRT1
Gorilla gorilla
ENSGGOG00000013612
I
0.790
SCRT1
Loxodonta africana
ENSLAFG00000031587
I
0.790
Scrt1
Mus musculus
ENSMUSG00000048385
I
0.790
ENSOARG00000014008
Ovis aries
ENSOARG00000014008
I
0.790
SCRT1
Otolemur garnettii
ENSOGAG00000026538
I
0.790
ENSPANG00000017232
Papio anubis
ENSPANG00000017232
I
0.790
Scrt1
Rattus norvegicus
ENSRNOG00000025594
I
0.790
SCRT1
Sus scrofa
ENSSSCG00000025879
I
0.790
ENSSTOG00000023184
Ictidomys tridecemlineatus
ENSSTOG00000023184
I
0.790
scrt
Drosophila melanogaster
FBgn0004880
D
0.790
GF25020
Drosophila ananassae
FBgn0102012
I
0.790
GG15174
Drosophila erecta
FBgn0107427
I
0.790
GH15771
Drosophila grimshawi
FBgn0123242
I
0.790
GI12551
Drosophila mojavensis
FBgn0135308
I
0.790
GM11368
Drosophila sechellia
FBgn0166311
I
0.790
GM14603
Drosophila sechellia
FBgn0169524
I
0.790
GD13794
Drosophila simulans
FBgn0185494
I
0.790
GJ16103
Drosophila virilis
FBgn0203288
I
0.790
GK17507
Drosophila willistoni
FBgn0219506
I
0.790
GE21392
Drosophila yakuba
FBgn0238652
I
0.790
LCUP005780
Lucilia cuprina
LCUP005780
I
0.790
MDOA005810
Musca domestica
MDOA005810
I
0.790
SCRT1
Macaca mulatta
ENSMMUG00000028886
I
0.789
CpipJ_CPIJ017517
Culex pipiens
CpipJ_CPIJ017517
I
0.788
AAEL005176
Aedes aegypti
AAEL005176
I
0.788
AGAP006791
Anopheles gambiae
AGAP006791
I
0.788
CPIJ017517
Culex quinquefasciatus
CPIJ017517
I
0.788
L798_11766
Zootermopsis nevadensis
L798_11766
I
0.788
PHUM474180
Pediculus humanus
PHUM474180
I
0.788
Cflo_09305--XP_001121064.1_APIME
Camponotus floridanus
Cflo_09305--XP_001121064.1_APIME
I
0.788
CLEC001353
Cimex lectularius
CLEC001353
I
0.788
HHAL001092-PA
Halyomorpha halys
HHAL001092-PA
I
0.788
HHAL001095-PA
Halyomorpha halys
HHAL001095-PA
I
0.788
AATE020159
Anopheles atroparvus
AATE020159
I
0.788
ACHR010032
Anopheles christyi
ACHR010032
I
0.788
ACOM031685
Anopheles coluzzii
ACOM031685
I
0.788
ACUA022497
Anopheles culicifacies
ACUA022497
I
0.788
AFAF007486
Anopheles farauti
AFAF007486
I
0.788
AFUN002786
Anopheles funestus
AFUN002786
I
0.788
AMEC013076
Anopheles melas
AMEC013076
I
0.788
AMEM013788
Anopheles merus
AMEM013788
I
0.788
AQUA003879
Anopheles quadriannulatus
AQUA003879
I
0.788
ASIS022059
Anopheles sinensis
ASIS022059
I
0.788
LLOJ003272
Lutzomyia longipalpis
LLOJ003272
I
0.788
PPAI000594
Phlebotomus papatasi
PPAI000594
I
0.788
ENSSHAG00000001992
Sarcophilus harrisii
ENSSHAG00000001992
I
0.787
PTRK_0000719800
Parastrongyloides trichosuri
PTRK_0000719800
I
0.787
SSTP_0000144900
Strongyloides stercoralis
SSTP_0000144900
I
0.787
AAEL009230
Aedes aegypti
AAEL009230
I
0.786
AAEL014359
Aedes aegypti
AAEL014359
I
0.786
SPAL_0000842500
Strongyloides papillosus
SPAL_0000842500
I
0.785
SVE_1799900
Strongyloides venezuelensis
SVE_1799900
I
0.785
ACYPI004643
Acyrthosiphon pisum
ACYPI004643
I
0.781
NEMVEDRAFT_v1g108258
Nematostella vectensis
NEMVEDRAFT_v1g108258
I
0.781
LCUP005777
Lucilia cuprina
LCUP005777
I
0.781
MDOA001622
Musca domestica
MDOA001622
I
0.781
CapteG223614
Capitella teleta
CapteG223614
I
0.780
ENSONIG00000003152
Oreochromis niloticus
ENSONIG00000003152
I
0.780
SCRT2
Callithrix jacchus
ENSCJAG00000020870
I
0.779
SCRT2
Cavia porcellus
ENSCPOG00000008447
I
0.779
ENSCSAG00000010473
Chlorocebus sabaeus
ENSCSAG00000010473
I
0.779
SCRT2
Dasypus novemcinctus
ENSDNOG00000002583
I
0.779
SCRT2
Felis catus
ENSFCAG00000010922
I
0.779
SCRT2
Homo sapiens
ENSG00000215397
D
0.779
ENSGGOG00000015228
Gorilla gorilla
ENSGGOG00000015228
I
0.779
SCRT2
Loxodonta africana
ENSLAFG00000030340
I
0.779
ENSMMUG00000017354
Macaca mulatta
ENSMMUG00000017354
I
0.779
Scrt2
Mus musculus
ENSMUSG00000060257
I
0.779
ENSNLEG00000009420
Nomascus leucogenys
ENSNLEG00000009420
I
0.779
SCRT2
Otolemur garnettii
ENSOGAG00000031187
I
0.779
Scrt2
Rattus norvegicus
ENSRNOG00000005148
I
0.779
SCRT2
Tursiops truncatus
ENSTTRG00000007039
I
0.779
D918_03987
Trichuris suis
D918_03987
I
0.779
TMUE_s0027002700
Trichuris muris
TMUE_s0027002700
I
0.779
TTRE_0000441701
Trichuris trichiura
TTRE_0000441701
I
0.779
BGIBMGA000607
Bombyx mori
BGIBMGA000607
I
0.778
HMEL014701
Heliconius melpomene
HMEL014701
I
0.778
KGM_21493
Danaus plexippus
KGM_21493
I
0.778
MCINX009925
Melitaea cinxia
MCINX009925
I
0.778
nRc.2.0.1.g22231
Romanomermis culicivorax
nRc.2.0.1.g22231
I
0.777
CapteG176021
Capitella teleta
CapteG176021
I
0.774
CapteG76620
Capitella teleta
CapteG76620
I
0.774
EFV52761
Trichinella spiralis
EFV52761
I
0.773
MESCA005876
Megaselia scalaris
MESCA005876
I
0.773
D915_06717
Fasciola hepatica
D915_06717
I
0.773
D917_06340
Trichinella nativa
D917_06340
I
0.773
ECPE_0000958201
Echinostoma caproni
ECPE_0000958201
I
0.773
L898_g5709
Steinernema monticolum
L898_g5709
I
0.773
CapteG149623
Capitella teleta
CapteG149623
I
0.772
EVEC_0000710001
Enterobius vermicularis
EVEC_0000710001
I
0.772
SMUV_0000843501
Syphacia muris
SMUV_0000843501
I
0.772
Smp_054430
Schistosoma mansoni
Smp_054430
I
0.771
Sjc_0100840
Schistosoma japonicum
Sjc_0100840
I
0.771
SMU15013927
Schmidtea mediterranea
SMU15013927
I
0.771
A_07725
Schistosoma haematobium
A_07725
I
0.771
csin111588
Clonorchis sinensis
csin111588
I
0.771
L889_g21793
Steinernema feltiae
L889_g21793
I
0.771
SCUD_0000371801
Schistosoma curassoni
SCUD_0000371801
I
0.771
SMRZ_0000904801
Schistosoma margrebowiei
SMRZ_0000904801
I
0.771
SMTD_0000188801
Schistosoma mattheei
SMTD_0000188801
I
0.771
T265_09545
Opisthorchis viverrini
T265_09545
I
0.771
TRE_0000944501
Trichobilharzia regenti
TRE_0000944501
I
0.771
ALUE_0002049001
Ascaris lumbricoides
ALUE_0002049001
I
0.770
RSKR_0000492900
Rhabditophanes kr3021
RSKR_0000492900
I
0.770
TCNE_0000669301
Toxocara canis
TCNE_0000669301
I
0.770
DAPPUDRAFT_14328
Daphnia pulex
DAPPUDRAFT_14328
I
0.768
L596_g15116
Steinernema carpocapsae
L596_g15116
I
0.768
L892_g9690
Steinernema scapterisci
L892_g9690
I
0.768
L893_g27175
Steinernema glaseri
L893_g27175
I
0.768
PXEA_0002510801
Protopolystoma xenopodis
PXEA_0002510801
I
0.764
LotgiG58520
Lottia gigantea
LotgiG58520
I
0.763
TriadG20314
Trichoplax adhaerens
TriadG20314
I
0.763
PHUM474050
Pediculus humanus
PHUM474050
I
0.761
DME_0000421901
Dracunculus medinensis
DME_0000421901
I
0.761
BGIBMGA000604
Bombyx mori
BGIBMGA000604
I
0.757