CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GD13304
(
Drosophila simulans
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0185023
T116257_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CG12605
M03691_2.00
Drosophila melanogaster
RHGCAACAGGTGN
NCACCTGTTGCDY
SELEX
Nitta et al.(2015)
CG12605_1
0.827
1.000
CG12605
M06139_2.00
Drosophila melanogaster
CACCTGTKG
CMACAGGTG
B1H
Zhu et al.(2011)
CG12605_SANGER_10_FBgn0035481
0.827
1.000
CG12605
M06140_2.00
Drosophila melanogaster
MCACCTGTKGVNN
NNBCMACAGGTGK
B1H
Zhu et al.(2011)
CG12605_SOLEXA_5_FBgn0035481
0.827
1.000
scrt
M03673_2.00
Drosophila melanogaster
RHGCAACAGGTGK
MCACCTGTTGCDY
SELEX
Nitta et al.(2015)
scrt_1
0.786
0.912
scrt
M06085_2.00
Drosophila melanogaster
MCCACCTGTTG
CAACAGGTGGK
B1H
Zhu et al.(2011)
scrt_SANGER_2.5_FBgn0004880
0.786
0.912
scrt
M06086_2.00
Drosophila melanogaster
DNKCAACAGGTGK
MCACCTGTTGMNH
B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_1_FBgn0004880
0.786
0.912
scrt
M06087_2.00
Drosophila melanogaster
VMCACCTGTTGMN
NKCAACAGGTGKB
B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_2_FBgn0004880
0.786
0.912
SCRT1
M02929_2.00
Homo sapiens
RHKCAACAGGTGKNH
DNMCACCTGTTGMDY
SELEX
Jolma et al.(2013)
SCRT1_1
0.767
0.807
SCRT1
M04655_2.00
Homo sapiens
NKCAACAGGTD
HACCTGTTGMN
SELEX
Yin et al.(2017)
SCRT1_eDBD_HT-SELEX
0.767
0.807
SCRT1
M08397_2.00
Homo sapiens
RWKCAACAGGTG
CACCTGTTGMWY
ChIP-seq
Schmitges et al.(2016)
Q9BWW7_1-4.RCADE
0.767
0.807
SCRT1
M04656_2.00
Homo sapiens
NGCRACAGGTD
HACCTGTYGCN
SELEX
Yin et al.(2017)
SCRT1_eDBD_Methyl-HT-SELEX
0.767
0.807
SCRT2
M02925_2.00
Homo sapiens
RHGCAACAGGTGB
VCACCTGTTGCDY
SELEX
Jolma et al.(2013)
SCRT2_1
0.758
0.789
SCRT2
M04643_2.00
Homo sapiens
NGCAACAGGTD
HACCTGTTGCN
SELEX
Yin et al.(2017)
SCRT2_eDBD_HT-SELEX
0.758
0.789
SCRT2
M04644_2.00
Homo sapiens
NGCRACAGGTG
CACCTGTYGCN
SELEX
Yin et al.(2017)
SCRT2_eDBD_Methyl-HT-SELEX
0.758
0.789
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0211706
C2H2 ZF
103
125
YKCCECGKQYATSSNLSRHKQTH
FBpp0211706
C2H2 ZF
134
156
KKCNTCGKAYVSMPALAMHLLTH
FBpp0211706
C2H2 ZF
160
182
HSCDICGKLFSRPWLLQGHLRSH
FBpp0211706
C2H2 ZF
188
210
YACVHCGKAFADRSNLRAHMQTH
FBpp0211706
C2H2 ZF
216
237
FKCHRCNKTFALKSYLNKHLES
Links
Other
C2H2 ZF
family TFs
Other
Drosophila simulans
TFs
182 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CG12605
Drosophila melanogaster
FBgn0035481
D
0.827
GF24781
Drosophila ananassae
FBgn0101774
I
0.827
GG14232
Drosophila erecta
FBgn0106493
I
0.827
GM14024
Drosophila sechellia
FBgn0168953
I
0.827
GD13305
Drosophila simulans
FBgn0185024
I
0.827
GE20660
Drosophila yakuba
FBgn0237965
I
0.827
GA11715
Drosophila pseudoobscura
FBgn0071765
I
0.825
GK16692
Drosophila willistoni
FBgn0218694
I
0.825
GI12763
Drosophila mojavensis
FBgn0135520
I
0.811
GJ16104
Drosophila virilis
FBgn0203289
I
0.811
LCUP005777
Lucilia cuprina
LCUP005777
I
0.810
MDOA001622
Musca domestica
MDOA001622
I
0.807
CpipJ_CPIJ004535
Culex pipiens
CpipJ_CPIJ004535
I
0.795
AGAP006794
Anopheles gambiae
AGAP006794
I
0.795
CPIJ004535
Culex quinquefasciatus
CPIJ004535
I
0.795
AATE010651
Anopheles atroparvus
AATE010651
I
0.795
ACOM031677
Anopheles coluzzii
ACOM031677
I
0.795
ACUA003488
Anopheles culicifacies
ACUA003488
I
0.795
ACUA020861
Anopheles culicifacies
ACUA020861
I
0.795
AFAF017001
Anopheles farauti
AFAF017001
I
0.795
AFUN001835
Anopheles funestus
AFUN001835
I
0.795
AMEC015586
Anopheles melas
AMEC015586
I
0.795
AMEM017035
Anopheles merus
AMEM017035
I
0.795
ASIS012063
Anopheles sinensis
ASIS012063
I
0.795
ASTEI08595
Anopheles stephensi
ASTEI08595
I
0.795
ENSLOCG00000002246
Lepisosteus oculatus
ENSLOCG00000002246
I
0.793
SPU_018393
Strongylocentrotus purpuratus
SPU_018393
I
0.793
scrt1b
Danio rerio
ENSDARG00000040214
I
0.790
scrt1a
Danio rerio
ENSDARG00000100821
I
0.790
ENSLACG00000003588
Latimeria chalumnae
ENSLACG00000003588
I
0.790
ENSLOCG00000007573
Lepisosteus oculatus
ENSLOCG00000007573
I
0.790
ENSAMXG00000004776
Astyanax mexicanus
ENSAMXG00000004776
I
0.788
ENSAMXG00000018604
Astyanax mexicanus
ENSAMXG00000018604
I
0.788
ENSAMXG00000018733
Astyanax mexicanus
ENSAMXG00000018733
I
0.788
SCRT1
Gasterosteus aculeatus
ENSGACG00000004072
I
0.788
ENSGMOG00000000629
Gadus morhua
ENSGMOG00000000629
I
0.788
ENSGMOG00000019519
Gadus morhua
ENSGMOG00000019519
I
0.788
ENSONIG00000019809
Oreochromis niloticus
ENSONIG00000019809
I
0.788
scrt1b
Oryzias latipes
ENSORLG00000008641
I
0.788
scrt2
Oryzias latipes
ENSORLG00000015072
I
0.788
ENSPFOG00000005616
Poecilia formosa
ENSPFOG00000005616
I
0.788
ENSPFOG00000007738
Poecilia formosa
ENSPFOG00000007738
I
0.788
ENSPFOG00000017719
Poecilia formosa
ENSPFOG00000017719
I
0.788
scrt2
Tetraodon nigroviridis
ENSTNIG00000012473
I
0.788
scrt1b
Tetraodon nigroviridis
ENSTNIG00000018384
I
0.788
scrt2
Takifugu rubripes
ENSTRUG00000007620
I
0.788
scrt1b
Takifugu rubripes
ENSTRUG00000011637
I
0.788
SCRT1
Takifugu rubripes
ENSTRUG00000012719
I
0.788
ENSXMAG00000011590
Xiphophorus maculatus
ENSXMAG00000011590
I
0.788
ENSXMAG00000014491
Xiphophorus maculatus
ENSXMAG00000014491
I
0.788
ENSXMAG00000015353
Xiphophorus maculatus
ENSXMAG00000015353
I
0.788
SMAR010760
Strigamia maritima
SMAR010760
I
0.788
Sakowv30035375m.g
Saccoglossus kowalevskii
Sakowv30035375m.g
I
0.788
CpipJ_CPIJ017517
Culex pipiens
CpipJ_CPIJ017517
I
0.786
AAEL005176
Aedes aegypti
AAEL005176
I
0.786
AAEL009230
Aedes aegypti
AAEL009230
I
0.786
AAEL014359
Aedes aegypti
AAEL014359
I
0.786
AGAP006791
Anopheles gambiae
AGAP006791
I
0.786
CPIJ017517
Culex quinquefasciatus
CPIJ017517
I
0.786
scrt2
Danio rerio
ENSDARG00000056175
I
0.786
scrt2
Gasterosteus aculeatus
ENSGACG00000011802
I
0.786
ENSONIG00000003152
Oreochromis niloticus
ENSONIG00000003152
I
0.786
ENSONIG00000006007
Oreochromis niloticus
ENSONIG00000006007
I
0.786
ENSONIG00000016758
Oreochromis niloticus
ENSONIG00000016758
I
0.786
scrt
Drosophila melanogaster
FBgn0004880
D
0.786
GF25020
Drosophila ananassae
FBgn0102012
I
0.786
GG15174
Drosophila erecta
FBgn0107427
I
0.786
GH15771
Drosophila grimshawi
FBgn0123242
I
0.786
GI12551
Drosophila mojavensis
FBgn0135308
I
0.786
GM11368
Drosophila sechellia
FBgn0166311
I
0.786
GM14603
Drosophila sechellia
FBgn0169524
I
0.786
GD13794
Drosophila simulans
FBgn0185494
I
0.786
GJ16103
Drosophila virilis
FBgn0203288
I
0.786
GK17507
Drosophila willistoni
FBgn0219506
I
0.786
GE21392
Drosophila yakuba
FBgn0238652
I
0.786
LCUP005780
Lucilia cuprina
LCUP005780
I
0.786
scrt2
Xenopus tropicalis
XB-GENE-5995512
I
0.786
AATE020159
Anopheles atroparvus
AATE020159
I
0.786
ACHR010032
Anopheles christyi
ACHR010032
I
0.786
ACOM031685
Anopheles coluzzii
ACOM031685
I
0.786
ACUA022497
Anopheles culicifacies
ACUA022497
I
0.786
AFAF007486
Anopheles farauti
AFAF007486
I
0.786
AFUN002786
Anopheles funestus
AFUN002786
I
0.786
AMEC013076
Anopheles melas
AMEC013076
I
0.786
AMEM013788
Anopheles merus
AMEM013788
I
0.786
AQUA003879
Anopheles quadriannulatus
AQUA003879
I
0.786
ASIS022059
Anopheles sinensis
ASIS022059
I
0.786
LLOJ003272
Lutzomyia longipalpis
LLOJ003272
I
0.786
MDOA005810
Musca domestica
MDOA005810
I
0.786
PPAI000594
Phlebotomus papatasi
PPAI000594
I
0.786
SCRT2
Anolis carolinensis
ENSACAG00000016109
I
0.785
ENSFALG00000005718
Ficedula albicollis
ENSFALG00000005718
I
0.785
scrt1b
Gasterosteus aculeatus
ENSGACG00000008982
I
0.785
SCRT2
Gallus gallus
ENSGALG00000028912
I
0.785
SCRT2
Meleagris gallopavo
ENSMGAG00000016579
I
0.785
SCRT2
Taeniopygia guttata
ENSTGUG00000006801
I
0.785
MESCA005876
Megaselia scalaris
MESCA005876
I
0.785
Cmyd_10009565
Chelonia mydas
Cmyd_10009565
I
0.785
ENSAPLG00000011730
Anas platyrhynchos
ENSAPLG00000011730
I
0.783
Cflo_09305--XP_001121064.1_APIME
Camponotus floridanus
Cflo_09305--XP_001121064.1_APIME
I
0.783
CGI_10023711
Crassostrea gigas
CGI_10023711
I
0.780
tetur08g05890
Tetranychus urticae
tetur08g05890
I
0.778
Ocbimv22039583m.g
Octopus bimaculoides
Ocbimv22039583m.g
I
0.778
ENSMEUG00000009675
Macropus eugenii
ENSMEUG00000009675
I
0.776
SCRT2
Monodelphis domestica
ENSMODG00000019528
I
0.776
ISCW021315
Ixodes scapularis
ISCW021315
I
0.776
L798_11766
Zootermopsis nevadensis
L798_11766
I
0.776
PHUM474180
Pediculus humanus
PHUM474180
I
0.776
Ogr05737
Ophisaurus gracilis
Ogr05737
I
0.776
Pvit_17685
Pogona vitticeps
Pvit_17685
I
0.776
CLEC001353
Cimex lectularius
CLEC001353
I
0.776
HHAL001092-PA
Halyomorpha halys
HHAL001092-PA
I
0.776
HHAL001095-PA
Halyomorpha halys
HHAL001095-PA
I
0.776
NEMVEDRAFT_v1g108258
Nematostella vectensis
NEMVEDRAFT_v1g108258
I
0.773
estExt_fgenesh2_pm.C_2290002
Branchiostoma floridae
estExt_fgenesh2_pm.C_2290002
I
0.773
ACYPI004643
Acyrthosiphon pisum
ACYPI004643
I
0.768
ENSAMEG00000005557
Ailuropoda melanoleuca
ENSAMEG00000005557
I
0.767
SCRT1
Bos taurus
ENSBTAG00000046208
I
0.767
SCRT1
Callithrix jacchus
ENSCJAG00000021406
I
0.767
ENSCPOG00000024058
Cavia porcellus
ENSCPOG00000024058
I
0.767
ENSCSAG00000008549
Chlorocebus sabaeus
ENSCSAG00000008549
I
0.767
SCRT1
Dasypus novemcinctus
ENSDNOG00000043826
I
0.767
SCRT1
Homo sapiens
ENSG00000261678
D
0.767
SCRT1
Gorilla gorilla
ENSGGOG00000013612
I
0.767
SCRT1
Loxodonta africana
ENSLAFG00000031587
I
0.767
Scrt1
Mus musculus
ENSMUSG00000048385
I
0.767
ENSOARG00000014008
Ovis aries
ENSOARG00000014008
I
0.767
SCRT1
Otolemur garnettii
ENSOGAG00000026538
I
0.767
ENSPANG00000017232
Papio anubis
ENSPANG00000017232
I
0.767
Scrt1
Rattus norvegicus
ENSRNOG00000025594
I
0.767
SCRT1
Sus scrofa
ENSSSCG00000025879
I
0.767
ENSSTOG00000023184
Ictidomys tridecemlineatus
ENSSTOG00000023184
I
0.767
CapteG223614
Capitella teleta
CapteG223614
I
0.766
SCRT1
Macaca mulatta
ENSMMUG00000028886
I
0.766
PHUM474050
Pediculus humanus
PHUM474050
I
0.766
SMU15013927
Schmidtea mediterranea
SMU15013927
I
0.765
D918_03987
Trichuris suis
D918_03987
I
0.765
TMUE_s0027002700
Trichuris muris
TMUE_s0027002700
I
0.765
TTRE_0000441701
Trichuris trichiura
TTRE_0000441701
I
0.765
BGIBMGA000607
Bombyx mori
BGIBMGA000607
I
0.764
ENSSHAG00000001992
Sarcophilus harrisii
ENSSHAG00000001992
I
0.764
HMEL014701
Heliconius melpomene
HMEL014701
I
0.764
KGM_21493
Danaus plexippus
KGM_21493
I
0.764
MCINX009925
Melitaea cinxia
MCINX009925
I
0.764
EFV52761
Trichinella spiralis
EFV52761
I
0.761
Smp_054430
Schistosoma mansoni
Smp_054430
I
0.761
Sjc_0100840
Schistosoma japonicum
Sjc_0100840
I
0.761
A_07725
Schistosoma haematobium
A_07725
I
0.761
D915_06717
Fasciola hepatica
D915_06717
I
0.761
D917_06340
Trichinella nativa
D917_06340
I
0.761
ECPE_0000958201
Echinostoma caproni
ECPE_0000958201
I
0.761
PTRK_0000719800
Parastrongyloides trichosuri
PTRK_0000719800
I
0.761
RSKR_0000492900
Rhabditophanes kr3021
RSKR_0000492900
I
0.761
SCUD_0000371801
Schistosoma curassoni
SCUD_0000371801
I
0.761
SMRZ_0000904801
Schistosoma margrebowiei
SMRZ_0000904801
I
0.761
SMTD_0000188801
Schistosoma mattheei
SMTD_0000188801
I
0.761
SPAL_0000842500
Strongyloides papillosus
SPAL_0000842500
I
0.761
SSTP_0000144900
Strongyloides stercoralis
SSTP_0000144900
I
0.761
SVE_1799900
Strongyloides venezuelensis
SVE_1799900
I
0.761
TRE_0000944501
Trichobilharzia regenti
TRE_0000944501
I
0.761
TriadG20314
Trichoplax adhaerens
TriadG20314
I
0.760
csin111588
Clonorchis sinensis
csin111588
I
0.759
T265_09545
Opisthorchis viverrini
T265_09545
I
0.759
CapteG149623
Capitella teleta
CapteG149623
I
0.758
CapteG176021
Capitella teleta
CapteG176021
I
0.758
CapteG76620
Capitella teleta
CapteG76620
I
0.758
SCRT2
Callithrix jacchus
ENSCJAG00000020870
I
0.758
SCRT2
Cavia porcellus
ENSCPOG00000008447
I
0.758
ENSCSAG00000010473
Chlorocebus sabaeus
ENSCSAG00000010473
I
0.758
SCRT2
Dasypus novemcinctus
ENSDNOG00000002583
I
0.758
SCRT2
Felis catus
ENSFCAG00000010922
I
0.758
SCRT2
Homo sapiens
ENSG00000215397
D
0.758
ENSGGOG00000015228
Gorilla gorilla
ENSGGOG00000015228
I
0.758
SCRT2
Loxodonta africana
ENSLAFG00000030340
I
0.758
ENSMMUG00000017354
Macaca mulatta
ENSMMUG00000017354
I
0.758
Scrt2
Mus musculus
ENSMUSG00000060257
I
0.758
ENSNLEG00000009420
Nomascus leucogenys
ENSNLEG00000009420
I
0.758
SCRT2
Otolemur garnettii
ENSOGAG00000031187
I
0.758
Scrt2
Rattus norvegicus
ENSRNOG00000005148
I
0.758
SCRT2
Tursiops truncatus
ENSTTRG00000007039
I
0.758
PXEA_0002510801
Protopolystoma xenopodis
PXEA_0002510801
I
0.757
DAPPUDRAFT_14328
Daphnia pulex
DAPPUDRAFT_14328
I
0.756