CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_5BL_46BDE583B
(
Triticum aestivum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
Traes_5BL_46BDE583B
T130604_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_5BL_46BDE583B.1
C2H2 ZF
222
243
YACRRCGKRFAVRGDWRTHEKN
Traes_5BL_46BDE583B.1
C2H2 ZF
242
268
KNCGKLWFCVCGSDFKHKRSLKDHVRS
Links
Other
C2H2 ZF
family TFs
Other
Triticum aestivum
TFs
218 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29603.m000513
Ricinus communis
29603.m000513
N
0.000
Bo1g102270
Brassica oleracea
Bo1g102270
I
0.000
Bo4g126940
Brassica oleracea
Bo4g126940
I
0.000
Bo7g040830
Brassica oleracea
Bo7g040830
I
0.000
Bra014923
Brassica rapa
Bra014923
I
0.000
cassava35418.valid.m1
Manihot esculenta
cassava35418.valid.m1
N
0.000
Ciclev10005872m.g
Citrus clementina
Ciclev10005872m.g
I
0.000
Cla021854
Citrullus lanatus
Cla021854
I
0.000
Cucsa.255290
Cucumis sativus
Cucsa.255290
I
0.000
Eucgr.H00174
Eucalyptus grandis
Eucgr.H00174
N
0.000
evm.TU.supercontig_44.78
Carica papaya
evm.TU.supercontig_44.78
I
0.000
gene11436-v1.0-hybrid
Fragaria vesca
gene11436-v1.0-hybrid
I
0.000
GLYMA10G01010
Glycine max
GLYMA10G01010
I
0.000
GLYMA20G22010
Glycine max
GLYMA20G22010
I
0.000
Lus10021199.g
Linum usitatissimum
Lus10021199.g
N
0.000
Lus10021876.g
Linum usitatissimum
Lus10021876.g
N
0.000
Lus10022186.g
Linum usitatissimum
Lus10022186.g
I
0.000
orange1.1g028060m.g
Citrus sinensis
orange1.1g028060m.g
I
0.000
POPTR_0008s16560
Populus trichocarpa
POPTR_0008s16560
N
0.000
POPTR_0010s08360
Populus trichocarpa
POPTR_0010s08360
N
0.000
PRUPE_ppa011217mg
Prunus persica
PRUPE_ppa011217mg
I
0.000
SapurV1A.0007s0940
Salix purpurea
SapurV1A.0007s0940
N
0.000
SapurV1A.0292s0060
Salix purpurea
SapurV1A.0292s0060
N
0.000