Afo_R004626 (Aptenodytes forsteri)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Afo_R004626 T132789_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL11B
M04453_2.00 		Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX 		0.827 1.000
BCL11B
M04454_2.00 		Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX 		0.827 1.000
BCL11A
M07926_2.00 		Homo sapiens
BTYTCASTTCCYYHH
DDRRGGAASTGARAV		 ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha 		0.806 0.947
BCL11A
M08881_2.00 		Homo sapiens
BHBYCABTTCCYBHNYN
NRNDVRGGAAVTGRVDV		 Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A 		0.806 0.947
BCL11A
M10187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL11A_02 		0.806 0.947
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R004626 C2H2 ZF 409 430
Afo_R004626 C2H2 ZF 436 458
Afo_R004626 C2H2 ZF 766 788
Afo_R004626 C2H2 ZF 794 816
Afo_R004626 C2H2 ZF 824 847

Links

Other C2H2 ZF family TFs
Other Aptenodytes forsteri TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL010903 Aedes aegypti AAEL010903 N
AAH41216 Xenopus laevis AAH41216 N
AALB002196 Anopheles albimanus AALB002196 N
AARA006951 Anopheles arabiensis AARA006951 N
AATE020748 Anopheles atroparvus AATE020748 N
ACAC_0000207501 Angiostrongylus cantonensis ACAC_0000207501 N
ACEP21543 Atta cephalotes ACEP21543 N
ACHR000824 Anopheles christyi ACHR000824 N
ACOM023536 Anopheles coluzzii ACOM023536 N
ACUA002517 Anopheles culicifacies ACUA002517 N
ACYPI008028 Acyrthosiphon pisum ACYPI008028 N
ADAC004863 Anopheles darlingi ADAC004863 N
ADIR010513 Anopheles dirus ADIR010513 N
AEPI007457 Anopheles epiroticus AEPI007457 N
AFAF004631 Anopheles farauti AFAF004631 N
AFUN008276 Anopheles funestus AFUN008276 N
AGAP001994 Anopheles gambiae AGAP001994 N
AMAM007470 Anopheles maculatus AMAM007470 N
AMEC010472 Anopheles melas AMEC010472 N
AMEM015770 Anopheles merus AMEM015770 N
AMIN003302 Anopheles minimus AMIN003302 N
ANCCAN_03785 Ancylostoma caninum ANCCAN_03785 N
ANCCAN_09575 Ancylostoma caninum ANCCAN_09575 N
ANCCEY_02937 Ancylostoma ceylanicum ANCCEY_02937 N
ANCDUO_12071 Ancylostoma duodenale ANCDUO_12071 N
Aqu1.224100 Amphimedon queenslandica Aqu1.224100 N
AQUA007127 Anopheles quadriannulatus AQUA007127 N
ASIS021704 Anopheles sinensis ASIS021704 N
ASTEI00336 Anopheles stephensi ASTEI00336 N
A_05744 Schistosoma haematobium A_05744 N
BGIBMGA009228 Bombyx mori BGIBMGA009228 N
CapteG156119 Capitella teleta CapteG156119 N
Cflo_00654--XP_395543.3_APIME Camponotus floridanus Cflo_00654--XP_395543.3_APIME N
CLEC001104 Cimex lectularius CLEC001104 N
CLEC007658 Cimex lectularius CLEC007658 N
CLEC009203 Cimex lectularius CLEC009203 N
CPIJ007400 Culex quinquefasciatus CPIJ007400 N
CPIJ018416 Culex quinquefasciatus CPIJ018416 N
CpipJ_CPIJ007400 Culex pipiens CpipJ_CPIJ007400 N
CpipJ_CPIJ018416 Culex pipiens CpipJ_CPIJ018416 N
csin103376 Clonorchis sinensis csin103376 N
D915_15883 Fasciola hepatica D915_15883 N
D918_01415 Trichuris suis D918_01415 N
DAPPUDRAFT_305068 Daphnia pulex DAPPUDRAFT_305068 N
ECANG7_05376 Echinococcus canadensis ECANG7_05376 N
EmuJ_000113200 Echinococcus multilocularis EmuJ_000113200 N
ENSCING00000007774 Ciona intestinalis ENSCING00000007774 N
ENSCJAG00000006608 Callithrix jacchus ENSCJAG00000006608 N
ENSCSAVG00000010367 Ciona savignyi ENSCSAVG00000010367 N
ENSFCAG00000026463 Felis catus ENSFCAG00000026463 N
SMARCE1 Gasterosteus aculeatus ENSGACG00000018114 N
ENSGGOG00000024929 Gorilla gorilla ENSGGOG00000024929 N
ENSGMOG00000002045 Gadus morhua ENSGMOG00000002045 N
ENSOCUG00000016848 Oryctolagus cuniculus ENSOCUG00000016848 N
ENSONIG00000006293 Oreochromis niloticus ENSONIG00000006293 N
smarce1 Oryzias latipes ENSORLG00000018629 N
ENSPFOG00000009890 Poecilia formosa ENSPFOG00000009890 N
ENSPFOG00000019561 Poecilia formosa ENSPFOG00000019561 N
ENSPPYG00000012585 Pongo abelii ENSPPYG00000012585 N
AC123471.1 Rattus norvegicus ENSRNOG00000018377 N
smarce1 Tetraodon nigroviridis ENSTNIG00000014009 N
smarce1 Takifugu rubripes ENSTRUG00000012899 N
ENSXMAG00000002642 Xiphophorus maculatus ENSXMAG00000002642 N
dalao Drosophila melanogaster FBgn0030093 N
GF19131 Drosophila ananassae FBgn0096142 N
GG18291 Drosophila erecta FBgn0110507 N
GH12291 Drosophila grimshawi FBgn0119770 N
GI15536 Drosophila mojavensis FBgn0138285 N
GL26801 Drosophila persimilis FBgn0164382 N
GM13722 Drosophila sechellia FBgn0168653 N
GD16931 Drosophila simulans FBgn0188511 N
GJ14880 Drosophila virilis FBgn0202084 N
GK25765 Drosophila willistoni FBgn0227724 N
GE15824 Drosophila yakuba FBgn0233388 N
GA26137 Drosophila pseudoobscura FBgn0247513 N
fgenesh2_pg.scaffold_137000001 Branchiostoma floridae fgenesh2_pg.scaffold_137000001 N
GB50847 Apis mellifera GB50847 N
HCOI00022200 Haemonchus contortus HCOI00022200 N
HCOI00569400 Haemonchus contortus HCOI00569400 N
HDID_0000207001 Hymenolepis diminuta HDID_0000207001 N
HelroG188630 Helobdella robusta HelroG188630 N
HHAL002088-PA Halyomorpha halys HHAL002088-PA N
HHAL007378-PA Halyomorpha halys HHAL007378-PA N
HMEL010720 Heliconius melpomene HMEL010720 N
HPBE_0000083501 Heligmosomoides bakeri HPBE_0000083501 N
HPLM_0001658301 Haemonchus placei HPLM_0001658301 N
Hsal_01302--XP_395543.3_APIME Harpegnathos saltator Hsal_01302--XP_395543.3_APIME N
ISCW021016 Ixodes scapularis ISCW021016 N
KGM_12870 Danaus plexippus KGM_12870 N
L798_00593 Zootermopsis nevadensis L798_00593 N
LCUP013669 Lucilia cuprina LCUP013669 N
LDEC003494 Leptinotarsa decemlineata LDEC003494 N
LLOJ006040 Lutzomyia longipalpis LLOJ006040 N
LotgiG111061 Lottia gigantea LotgiG111061 N
MCOS_0000928101 Mesocestoides corti MCOS_0000928101 N
MDOA009352 Musca domestica MDOA009352 N
MhA1_Contig1809.frz3.gene8 Meloidogyne hapla MhA1_Contig1809.frz3.gene8 N
NECAME_16117 Necator americanus NECAME_16117 N
NEMVEDRAFT_v1g177453 Nematostella vectensis NEMVEDRAFT_v1g177453 N
NV11999 Nasonia vitripennis NV11999 N
OESDEN_12607 Oesophagostomum dentatum OESDEN_12607 N
OESDEN_21929 Oesophagostomum dentatum OESDEN_21929 N
PPAI002058 Phlebotomus papatasi PPAI002058 N
PXEA_0001727801 Protopolystoma xenopodis PXEA_0001727801 N
Sakowv30017721m.g Saccoglossus kowalevskii Sakowv30017721m.g N
SCUD_0000923501 Schistosoma curassoni SCUD_0000923501 N
Sjc_0000110 Schistosoma japonicum Sjc_0000110 N
SMAR004982 Strigamia maritima SMAR004982 N
Smp_154640 Schistosoma mansoni Smp_154640 N
SMTD_0000014601 Schistosoma mattheei SMTD_0000014601 N
SMU15005679 Schmidtea mediterranea SMU15005679 N
SMU15025606 Schmidtea mediterranea SMU15025606 N
SPU_009282 Strongylocentrotus purpuratus SPU_009282 N
SROB_0000607501 Schistosoma rodhaini SROB_0000607501 N
SSLN_0001888901 Schistocephalus solidus SSLN_0001888901 N
SVUK_0000819801 Strongylus vulgaris SVUK_0000819801 N
T265_02983 Opisthorchis viverrini T265_02983 N
TASK_0000875901 Taenia asiatica TASK_0000875901 N
TC007745 Tribolium castaneum TC007745 N
TELCIR_14354 Teladorsagia circumcincta TELCIR_14354 N
TMUE_s0023006500 Trichuris muris TMUE_s0023006500 N
TriadG53566 Trichoplax adhaerens TriadG53566 N
TsM_000047400 Taenia solium TsM_000047400 N
TTRE_0000149701 Trichuris trichiura TTRE_0000149701 N
XP_002158206.1 Hydra magnipapillata XP_002158206.1 N
YQE_02381 Dendroctonus ponderosae YQE_02381 N