Cmyd_10009299 (Chelonia mydas)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cmyd_10009299 T134331_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MECOM
M08862_2.00 		Homo sapiens
HNTNTTATCTTRTCWN
NWGAYAAGATAANAND		 Misc
Kulakovskiy et al.(2013)
EVI1_HUMAN.H11MO.0.B 		0.800 0.987
MECOM
M10125_2.00 		Homo sapiens
TTATCTTATCTTRTCW
WGAYAAGATAAGATAA		 Transfac
Matys et al.(2006)
V$EVI1_01 		0.800 0.987
MECOM
M10126_2.00 		Homo sapiens
TTATCTTRTCH
DGAYAAGATAA		 Transfac
Matys et al.(2006)
V$EVI1_02 		0.800 0.987
MECOM
M10127_2.00 		Homo sapiens
TTATCTTATCT
AGATAAGATAA		 Transfac
Matys et al.(2006)
V$EVI1_03 		0.800 0.987
MECOM
M10128_2.00 		Homo sapiens
TAWYYWDWYHTATYH
DRATADRAHWRRAWA		 Transfac
Matys et al.(2006)
V$EVI1_04 		0.800 0.987
MECOM
M10129_2.00 		Homo sapiens
HTATCTTATCT
AGATAAGATAD		 Transfac
Matys et al.(2006)
V$EVI1_05 		0.800 0.987
MECOM
M10130_2.00 		Homo sapiens
TTATCTTGT
ACAAGATAA		 Transfac
Matys et al.(2006)
V$EVI1_06 		0.800 0.987
MECOM
M10131_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EVI1_Q3 		0.800 0.987
MECOM
M10132_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EVI_Q6 		0.800 0.987
Mecom
M02667_2.00 		Mus musculus
KNTTATCTTRTCTH
DAGAYAAGATAANM		 SELEX
Mathelier et al.(2014)
MA0029.1 		0.795 0.974
Mecom
M08980_2.00 		Mus musculus
HNTNTTATCTTRTCWN
NWGAYAAGATAANAND		 Misc
Kulakovskiy et al.(2013)
EVI1_MOUSE.H11MO.0.B 		0.795 0.974
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10009299 C2H2 ZF 84 105
Cmyd_10009299 C2H2 ZF 138 160
Cmyd_10009299 C2H2 ZF 166 188
Cmyd_10009299 C2H2 ZF 194 217
Cmyd_10009299 C2H2 ZF 223 245
Cmyd_10009299 C2H2 ZF 251 273
Cmyd_10009299 C2H2 ZF 280 301
Cmyd_10009299 C2H2 ZF 787 809
Cmyd_10009299 C2H2 ZF 815 838
Cmyd_10009299 C2H2 ZF 844 866

Links

Other C2H2 ZF family TFs
Other Chelonia mydas TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R014069 Calypte anna Aan_R014069 I 0.804
Afo_R003945 Aptenodytes forsteri Afo_R003945 I 0.804
B7ZRM8 Xenopus laevis B7ZRM8 I 0.766
B7ZRU9 Xenopus laevis B7ZRU9 I 0.784
Brh_R009954 Buceros rhinoceros Brh_R009954 I 0.804
MECOM Anolis carolinensis ENSACAG00000015620 I 0.798
ENSAMEG00000002052 Ailuropoda melanoleuca ENSAMEG00000002052 I 0.800
ENSAPLG00000012134 Anas platyrhynchos ENSAPLG00000012134 I 0.804
MECOM Bos taurus ENSBTAG00000005871 I 0.800
MECOM Canis familiaris ENSCAFG00000014621 I 0.800
MECOM Callithrix jacchus ENSCJAG00000002651 I 0.800
MECOM Cavia porcellus ENSCPOG00000013572 I 0.800
ENSCSAG00000012539 Chlorocebus sabaeus ENSCSAG00000012539 I 0.800
MECOM Dasypus novemcinctus ENSDNOG00000007746 I 0.800
MECOM Equus caballus ENSECAG00000020788 I 0.800
ENSFALG00000008636 Ficedula albicollis ENSFALG00000008636 I 0.800
MECOM Felis catus ENSFCAG00000012665 I 0.800
MECOM Homo sapiens ENSG00000085276 D 0.800
ENSGALG00000009437 Gallus gallus ENSGALG00000009437 I 0.804
MECOM Gorilla gorilla ENSGGOG00000013086 I 0.800
ENSLACG00000017233 Latimeria chalumnae ENSLACG00000017233 I 0.773
MECOM Loxodonta africana ENSLAFG00000011479 I 0.800
ENSLOCG00000009557 Lepisosteus oculatus ENSLOCG00000009557 I 0.777
MECOM Meleagris gallopavo ENSMGAG00000010302 I 0.804
MECOM Myotis lucifugus ENSMLUG00000015749 I 0.800
MECOM Macaca mulatta ENSMMUG00000002242 I 0.778
ENSMMUP00000002995 Macaca fascicularis ENSMMUP00000002995 I 0.778
MECOM Monodelphis domestica ENSMODG00000016133 I 0.797
ENSMPUG00000017083 Mustela putorius furo ENSMPUG00000017083 I 0.800
Mecom Mus musculus ENSMUSG00000027684 D 0.795
ENSNLEG00000004964 Nomascus leucogenys ENSNLEG00000004964 I 0.800
MECOM Ornithorhynchus anatinus ENSOANG00000007585 I 0.781
ENSOARG00000000899 Ovis aries ENSOARG00000000899 I 0.800
MECOM Oryctolagus cuniculus ENSOCUG00000010171 I 0.800
MECOM Otolemur garnettii ENSOGAG00000012812 I 0.800
ENSP00000417899-D1 Bos grunniens ENSP00000417899-D1 I 0.800
ENSPANG00000001637 Papio anubis ENSPANG00000001637 I 0.778
ENSPFOG00000011975 Poecilia formosa ENSPFOG00000011975 I 0.763
ENSPPYG00000014277 Pongo abelii ENSPPYG00000014277 I 0.800
ENSPSIG00000004908 Pelodiscus sinensis ENSPSIG00000004908 I 0.821
MECOM Pan troglodytes ENSPTRG00000015601 I 0.800
Mecom Rattus norvegicus ENSRNOG00000012645 I 0.795
ENSSHAG00000017530 Sarcophilus harrisii ENSSHAG00000017530 I 0.804
ENSTGUG00000011015 Taeniopygia guttata ENSTGUG00000011015 I 0.804
MECOM Tursiops truncatus ENSTTRG00000002158 I 0.800
ENSXMAG00000010745 Xiphophorus maculatus ENSXMAG00000010745 I 0.763
Gfo_R004540 Geospiza fortis Gfo_R004540 I 0.800
Myotis_brandtii_MECOM_10024770 Myotis brandtii Myotis_brandtii_MECOM_10024770 I 0.800
Pvit_19180 Pogona vitticeps Pvit_19180 I 0.798
Tal_R005471 Tyto alba Tal_R005471 I 0.804
mecom.S Xenopus laevis XB-GENE-6448217 I 0.766
mecom.L Xenopus laevis XB-GENE-980198 I 0.784