Pvit_07651 (Pogona vitticeps)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pvit_07651 T137171_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IKZF3
M08320_2.00 		Homo sapiens
TTCCCNNSB
VSNNGGGAA		 ChIP-seq
Schmitges et al.(2016)
Q9UKT9_2-4.RCADE 		0.795 0.890
IKZF2
M10105_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HELIOSA_01 		0.785 0.846
IKZF2
M10106_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HELIOSA_02 		0.785 0.846
IKZF1
M08939_2.00 		Homo sapiens
HYTCCCAV
BTGGGARD		 Misc
Kulakovskiy et al.(2013)
IKZF1_HUMAN.H11MO.0.C 		0.778 0.846
Ikzf1
M08969_2.00 		Mus musculus
HYTCCCAV
BTGGGARD		 Misc
Kulakovskiy et al.(2013)
IKZF1_MOUSE.H11MO.0.C 		0.778 0.846
IKZF1
M10301_2.00 		Homo sapiens
NHBYGGGAAYRYB
VRYRTTCCCRVDN		 Transfac
Matys et al.(2006)
V$IK1_01 		0.778 0.846
IKZF1
M10302_2.00 		Homo sapiens
BNNWTCCCRNNN
NNNYGGGAWNNV		 Transfac
Matys et al.(2006)
V$IK2_01 		0.778 0.846
IKZF1
M10303_2.00 		Homo sapiens
KNYHGGGAAYRYY
RRYRTTCCCDRNM		 Transfac
Matys et al.(2006)
V$IK3_01 		0.778 0.846
IKZF1
M10304_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IK_Q5_01 		0.778 0.846
IKZF1
M10305_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IK_Q5 		0.778 0.846
IKZF1
M10306_2.00 		Homo sapiens
YYTCCCARA
TYTGGGARR		 Transfac
Matys et al.(2006)
V$LYF1_01 		0.778 0.846
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_07651 C2H2 ZF 43 65
Pvit_07651 C2H2 ZF 71 93
Pvit_07651 C2H2 ZF 99 121
Pvit_07651 C2H2 ZF 127 148

Links

Other C2H2 ZF family TFs
Other Pogona vitticeps TFs

171 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28345.m000111 Ricinus communis 28345.m000111 N 0.000
29603.m000536 Ricinus communis 29603.m000536 I 0.000
Al_scaffold_0409_3 Arabidopsis lyrata Al_scaffold_0409_3 I 0.000
ZFP11 Arabidopsis thaliana AT2G42410 I 0.000
SUP Arabidopsis thaliana AT3G23130 I 0.000
AT4G17810 Arabidopsis thaliana AT4G17810 I 0.000
RBE Arabidopsis thaliana AT5G06070 D 0.000
BGIOSGA015610 Oryza indica BGIOSGA015610 I 0.000
BGIOSGA018378 Oryza indica BGIOSGA018378 I 0.000
BGIOSGA033510 Oryza indica BGIOSGA033510 I 0.000
Bo1g017920 Brassica oleracea Bo1g017920 I 0.000
Bo1g102390 Brassica oleracea Bo1g102390 I 0.000
Bo3g003640 Brassica oleracea Bo3g003640 I 0.000
Bo9g176590 Brassica oleracea Bo9g176590 I 0.000
Bostr.13129s0367 Boechera stricta Bostr.13129s0367 I 0.000
Bostr.19424s0332 Boechera stricta Bostr.19424s0332 I 0.000
Bostr.25993s0539 Boechera stricta Bostr.25993s0539 I 0.000
Bostr.30275s0246 Boechera stricta Bostr.30275s0246 I 0.000
Bra005874 Brassica rapa Bra005874 I 0.000
Bra009160 Brassica rapa Bra009160 I 0.000
Bra013257 Brassica rapa Bra013257 I 0.000
Bra023759 Brassica rapa Bra023759 I 0.000
BRADI3G55760 Brachypodium distachyon BRADI3G55760 I 0.000
Cagra.2117s0055 Capsella grandiflora Cagra.2117s0055 I 0.000
Cagra.2636s0028 Capsella grandiflora Cagra.2636s0028 I 0.000
Cagra.3356s0074 Capsella grandiflora Cagra.3356s0074 I 0.000
Cagra.3462s0001 Capsella grandiflora Cagra.3462s0001 I 0.000
Carubv10002935m.g Capsella rubella Carubv10002935m.g I 0.000
Carubv10006881m.g Capsella rubella Carubv10006881m.g I 0.000
Carubv10016073m.g Capsella rubella Carubv10016073m.g I 0.000
Carubv10024766m.g Capsella rubella Carubv10024766m.g I 0.000
cassava14614.m1 Manihot esculenta cassava14614.m1 I 0.000
cassava22028.m1 Manihot esculenta cassava22028.m1 I 0.000
cassava3359.m1 Manihot esculenta cassava3359.m1 I 0.000
cassava40050.m1 Manihot esculenta cassava40050.m1 I 0.000
cassava4410.m1 Manihot esculenta cassava4410.m1 N 0.000
Ca_12901 Cicer arietinum Ca_12901 I 0.000
Ciclev10006961m.g Citrus clementina Ciclev10006961m.g I 0.000
Cla008944 Citrullus lanatus Cla008944 I 0.000
Cla016442 Citrullus lanatus Cla016442 I 0.000
Cla021878 Citrullus lanatus Cla021878 I 0.000
Cucsa.255130 Cucumis sativus Cucsa.255130 I 0.000
Cucsa.313240 Cucumis sativus Cucsa.313240 I 0.000
Cucsa.321760 Cucumis sativus Cucsa.321760 I 0.000
evm.TU.supercontig_44.99 Carica papaya evm.TU.supercontig_44.99 I 0.000
F775_21953 Aegilops tauschii F775_21953 I 0.000
SUP Arabidopsis lyrata fgenesh2_kg.3__2524__AT3G23130.1 I 0.000
RBE Arabidopsis lyrata fgenesh2_kg.6__542__AT5G06070.1 I 0.000
gene08240-v1.0-hybrid Fragaria vesca gene08240-v1.0-hybrid I 0.000
GLYMA11G34285 Glycine max GLYMA11G34285 I 0.000
GLYMA12G35930 Glycine max GLYMA12G35930 I 0.000
GLYMA13G34450 Glycine max GLYMA13G34450 I 0.000
Gorai.002G256500 Gossypium raimondii Gorai.002G256500 N 0.000
Gorai.005G047800 Gossypium raimondii Gorai.005G047800 I 0.000
Gorai.006G247700 Gossypium raimondii Gorai.006G247700 I 0.000
Gorai.008G226800 Gossypium raimondii Gorai.008G226800 I 0.000
Gorai.012G106300 Gossypium raimondii Gorai.012G106300 I 0.000
GRMZM2G000126 Zea mays GRMZM2G000126 I 0.000
GRMZM2G137736 Zea mays GRMZM2G137736 I 0.000
GSMUA_Achr7G26850_001 Musa acuminata GSMUA_Achr7G26850_001 I 0.000
LjSGA_038753.2 Lotus japonicus LjSGA_038753.2 I 0.000
LPERR04G01660 Leersia perrieri LPERR04G01660 I 0.000
LPERR05G08090 Leersia perrieri LPERR05G08090 I 0.000
Lus10022206.g Linum usitatissimum Lus10022206.g I 0.000
MDP0000225209 Malus domestica MDP0000225209 I 0.000
MLOC_76482 Hordeum vulgare MLOC_76482 I 0.000
MTR_1g070265 Medicago truncatula MTR_1g070265 I 0.000
OB02G10110 Oryza brachyantha OB02G10110 I 0.000
OB04G12040 Oryza brachyantha OB04G12040 I 0.000
OB05G18710 Oryza brachyantha OB05G18710 I 0.000
OBART04G02370 Oryza barthii OBART04G02370 I 0.000
OBART05G10090 Oryza barthii OBART05G10090 I 0.000
OBART11G23770 Oryza barthii OBART11G23770 I 0.000
OGLUM04G02100 Oryza glumaepatula OGLUM04G02100 I 0.000
OGLUM05G10360 Oryza glumaepatula OGLUM05G10360 I 0.000
OGLUM11G22950 Oryza glumaepatula OGLUM11G22950 I 0.000
OLONG_005038 Oryza longistaminata OLONG_005038 I 0.000
OLONG_023754 Oryza longistaminata OLONG_023754 I 0.000
OMERI04G02610 Oryza meridionalis OMERI04G02610 I 0.000
OMERI07G13080 Oryza meridionalis OMERI07G13080 I 0.000
ONIVA04G01910 Oryza nivara ONIVA04G01910 I 0.000
ONIVA06G26970 Oryza nivara ONIVA06G26970 I 0.000
ONIVA11G23290 Oryza nivara ONIVA11G23290 I 0.000
OPUNC05G08760 Oryza punctata OPUNC05G08760 I 0.000
OPUNC11G05640 Oryza punctata OPUNC11G05640 I 0.000
orange1.1g041626m.g Citrus sinensis orange1.1g041626m.g I 0.000
ORGLA05G0088100 Oryza glaberrima ORGLA05G0088100 I 0.000
ORUFI04G03150 Oryza rufipogon ORUFI04G03150 I 0.000
ORUFI05G10920 Oryza rufipogon ORUFI05G10920 I 0.000
ORUFI11G25670 Oryza rufipogon ORUFI11G25670 I 0.000
OS04G0168100 Oryza sativa OS04G0168100 I 0.000
OS05G0286100 Oryza sativa OS05G0286100 I 0.000
OS11G0707300 Oryza sativa OS11G0707300 I 0.000
Pavir.Aa03593 Panicum virgatum Pavir.Aa03593 I 0.000
Pavir.Ab00024 Panicum virgatum Pavir.Ab00024 I 0.000
Pavir.Gb02516 Panicum virgatum Pavir.Gb02516 I 0.000
Pavir.J31403 Panicum virgatum Pavir.J31403 I 0.000
PDK_20s1313421g001 Phoenix dactylifera PDK_20s1313421g001 I 0.000
PDK_20s1360411g001 Phoenix dactylifera PDK_20s1360411g001 I 0.000
PGSC0003DMG400017271 Solanum tuberosum PGSC0003DMG400017271 I 0.000
PGSC0003DMG400040225 Solanum tuberosum PGSC0003DMG400040225 I 0.000
Pm002649 Prunus mume Pm002649 N 0.000
Pm009420 Prunus mume Pm009420 I 0.000
POPTR_0002s04260 Populus trichocarpa POPTR_0002s04260 I 0.000
POPTR_0008s16390 Populus trichocarpa POPTR_0008s16390 I 0.000
POPTR_0010s08530 Populus trichocarpa POPTR_0010s08530 I 0.000
POPTR_0016s10480 Populus trichocarpa POPTR_0016s10480 I 0.000
PRUPE_ppa015007mg Prunus persica PRUPE_ppa015007mg I 0.000
SapurV1A.0006s1030 Salix purpurea SapurV1A.0006s1030 I 0.000
SapurV1A.0007s0790 Salix purpurea SapurV1A.0007s0790 I 0.000
SapurV1A.0292s0200 Salix purpurea SapurV1A.0292s0200 I 0.000
SapurV1A.0378s0150 Salix purpurea SapurV1A.0378s0150 I 0.000
Sb06g001730 Sorghum bicolor Sb06g001730 I 0.000
scaffold_403098.1 Arabidopsis lyrata scaffold_403098.1 I 0.000
Si011797m.g Setaria italica Si011797m.g I 0.000
Si019050m.g Setaria italica Si019050m.g I 0.000
Si024070m.g Setaria italica Si024070m.g I 0.000
Solyc06g053720.1 Solanum lycopersicum Solyc06g053720.1 I 0.000
Solyc09g089590.1 Solanum lycopersicum Solyc09g089590.1 I 0.000
TCM_021875 Theobroma cacao TCM_021875 I 0.000
TCM_021876 Theobroma cacao TCM_021876 N 0.000
Thhalv10015420m.g Eutrema salsugineum Thhalv10015420m.g I 0.000
Thhalv10017870m.g Eutrema salsugineum Thhalv10017870m.g I 0.000
Thhalv10021992m.g Eutrema salsugineum Thhalv10021992m.g I 0.000
Traes_1AL_80D0BD0DC Triticum aestivum Traes_1AL_80D0BD0DC I 0.000
Traes_1BL_4026DC5011 Triticum aestivum Traes_1BL_4026DC5011 I 0.000
TRIUR3_03721 Triticum urartu TRIUR3_03721 I 0.000
TRIUR3_04794 Triticum urartu TRIUR3_04794 I 0.000
VIT_05s0049g00070 Vitis vinifera VIT_05s0049g00070 I 0.000
VIT_05s0049g00080 Vitis vinifera VIT_05s0049g00080 I 0.000