BRADI3G55760 (Brachypodium distachyon)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 BRADI3G55760 T082023_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RBE
M01858_2.00 		Arabidopsis thaliana
NNNASWN
NWSTNNN		 PBM
Weirauch et al.(2014)
pTH7538 		0.766 0.739
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI3G55760.1 C2H2 ZF 42 64

Links

Other C2H2 ZF family TFs
Other Brachypodium distachyon TFs

135 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRMZM2G344974 Zea mays GRMZM2G344974 I 0.817
Sb04g037590 Sorghum bicolor Sb04g037590 I 0.817
Si019563m.g Setaria italica Si019563m.g I 0.817
Pavir.Ab03315 Panicum virgatum Pavir.Ab03315 I 0.817
AMTR_s00022p00139230 Amborella trichopoda AMTR_s00022p00139230 N 0.798
OB02G10110 Oryza brachyantha OB02G10110 I 0.776
OPUNC11G05640 Oryza punctata OPUNC11G05640 I 0.776
OB02G44430 Oryza brachyantha OB02G44430 I 0.769
e_gw1.14.264.1 Physcomitrella patens e_gw1.14.264.1 I 0.769
e_gw1.1.457.1 Physcomitrella patens e_gw1.1.457.1 I 0.769
e_gw1.186.49.1 Physcomitrella patens e_gw1.186.49.1 I 0.769
e_gw1.6.268.1 Physcomitrella patens e_gw1.6.268.1 I 0.769
Al_scaffold_0409_3 Arabidopsis lyrata Al_scaffold_0409_3 I 0.766
ZFP11 Arabidopsis thaliana AT2G42410 I 0.766
SUP Arabidopsis thaliana AT3G23130 I 0.766
AT4G17810 Arabidopsis thaliana AT4G17810 I 0.766
RBE Arabidopsis thaliana AT5G06070 D 0.766
BGIOSGA018378 Oryza indica BGIOSGA018378 I 0.766
BGIOSGA033510 Oryza indica BGIOSGA033510 I 0.766
Bo1g017920 Brassica oleracea Bo1g017920 I 0.766
Bo1g102390 Brassica oleracea Bo1g102390 I 0.766
Bo3g003640 Brassica oleracea Bo3g003640 I 0.766
Bo9g176590 Brassica oleracea Bo9g176590 I 0.766
Bra005874 Brassica rapa Bra005874 I 0.766
Bra009160 Brassica rapa Bra009160 I 0.766
Bra013257 Brassica rapa Bra013257 I 0.766
Bra023759 Brassica rapa Bra023759 I 0.766
F775_00917 Aegilops tauschii F775_00917 I 0.766
SUP Arabidopsis lyrata fgenesh2_kg.3__2524__AT3G23130.1 I 0.766
RBE Arabidopsis lyrata fgenesh2_kg.6__542__AT5G06070.1 I 0.766
GLYMA11G34285 Glycine max GLYMA11G34285 I 0.766
GRMZM2G000126 Zea mays GRMZM2G000126 I 0.766
GSMUA_Achr7G26850_001 Musa acuminata GSMUA_Achr7G26850_001 I 0.766
LPERR05G08090 Leersia perrieri LPERR05G08090 I 0.766
MLOC_76482 Hordeum vulgare MLOC_76482 I 0.766
MTR_1g070265 Medicago truncatula MTR_1g070265 I 0.766
OB05G18710 Oryza brachyantha OB05G18710 I 0.766
OBART05G10090 Oryza barthii OBART05G10090 I 0.766
OBART11G23770 Oryza barthii OBART11G23770 I 0.766
OGLUM05G10360 Oryza glumaepatula OGLUM05G10360 I 0.766
OGLUM11G22950 Oryza glumaepatula OGLUM11G22950 I 0.766
OLONG_005038 Oryza longistaminata OLONG_005038 I 0.766
OLONG_023754 Oryza longistaminata OLONG_023754 I 0.766
OMERI07G13080 Oryza meridionalis OMERI07G13080 I 0.766
ONIVA06G26970 Oryza nivara ONIVA06G26970 I 0.766
ONIVA11G23290 Oryza nivara ONIVA11G23290 I 0.766
OPUNC05G08760 Oryza punctata OPUNC05G08760 I 0.766
ORGLA05G0088100 Oryza glaberrima ORGLA05G0088100 I 0.766
ORUFI05G10920 Oryza rufipogon ORUFI05G10920 I 0.766
ORUFI11G25670 Oryza rufipogon ORUFI11G25670 I 0.766
OS05G0286100 Oryza sativa OS05G0286100 I 0.766
OS11G0707300 Oryza sativa OS11G0707300 I 0.766
PGSC0003DMG400017271 Solanum tuberosum PGSC0003DMG400017271 I 0.766
PGSC0003DMG400040225 Solanum tuberosum PGSC0003DMG400040225 I 0.766
POPTR_0002s04260 Populus trichocarpa POPTR_0002s04260 I 0.766
POPTR_0008s16390 Populus trichocarpa POPTR_0008s16390 I 0.766
POPTR_0010s08530 Populus trichocarpa POPTR_0010s08530 I 0.766
PRUPE_ppa015007mg Prunus persica PRUPE_ppa015007mg I 0.766
scaffold_403098.1 Arabidopsis lyrata scaffold_403098.1 I 0.766
Si019050m.g Setaria italica Si019050m.g I 0.766
Si024070m.g Setaria italica Si024070m.g I 0.766
Solyc06g053720.1 Solanum lycopersicum Solyc06g053720.1 I 0.766
Solyc09g089590.1 Solanum lycopersicum Solyc09g089590.1 I 0.766
TCM_021875 Theobroma cacao TCM_021875 I 0.766
Traes_1AL_80D0BD0DC Triticum aestivum Traes_1AL_80D0BD0DC I 0.766
Traes_1BL_4026DC5011 Triticum aestivum Traes_1BL_4026DC5011 I 0.766
TRIUR3_03721 Triticum urartu TRIUR3_03721 I 0.766
TRIUR3_04794 Triticum urartu TRIUR3_04794 I 0.766
VIT_05s0049g00070 Vitis vinifera VIT_05s0049g00070 I 0.766
VIT_05s0049g00080 Vitis vinifera VIT_05s0049g00080 I 0.766
Cla008944 Citrullus lanatus Cla008944 I 0.766
Cla021878 Citrullus lanatus Cla021878 I 0.766
Pm009420 Prunus mume Pm009420 I 0.766
29603.m000536 Ricinus communis 29603.m000536 I 0.766
cassava14614.m1 Manihot esculenta cassava14614.m1 I 0.766
cassava22028.m1 Manihot esculenta cassava22028.m1 I 0.766
cassava3359.m1 Manihot esculenta cassava3359.m1 I 0.766
cassava40050.m1 Manihot esculenta cassava40050.m1 I 0.766
Cucsa.255130 Cucumis sativus Cucsa.255130 I 0.766
Cucsa.321760 Cucumis sativus Cucsa.321760 I 0.766
Bostr.13129s0367 Boechera stricta Bostr.13129s0367 I 0.766
Bostr.19424s0332 Boechera stricta Bostr.19424s0332 I 0.766
Bostr.25993s0539 Boechera stricta Bostr.25993s0539 I 0.766
Bostr.30275s0246 Boechera stricta Bostr.30275s0246 I 0.766
Cagra.2117s0055 Capsella grandiflora Cagra.2117s0055 I 0.766
Cagra.2636s0028 Capsella grandiflora Cagra.2636s0028 I 0.766
Cagra.3356s0074 Capsella grandiflora Cagra.3356s0074 I 0.766
Cagra.3462s0001 Capsella grandiflora Cagra.3462s0001 I 0.766
Carubv10002935m.g Capsella rubella Carubv10002935m.g I 0.766
Carubv10006881m.g Capsella rubella Carubv10006881m.g I 0.766
Carubv10016073m.g Capsella rubella Carubv10016073m.g I 0.766
Carubv10024766m.g Capsella rubella Carubv10024766m.g I 0.766
Ciclev10006961m.g Citrus clementina Ciclev10006961m.g I 0.766
evm.TU.supercontig_44.99 Carica papaya evm.TU.supercontig_44.99 I 0.766
gene08240-v1.0-hybrid Fragaria vesca gene08240-v1.0-hybrid I 0.766
Gorai.005G047800 Gossypium raimondii Gorai.005G047800 I 0.766
Gorai.006G247700 Gossypium raimondii Gorai.006G247700 I 0.766
Gorai.008G226800 Gossypium raimondii Gorai.008G226800 I 0.766
Gorai.012G106300 Gossypium raimondii Gorai.012G106300 I 0.766
Lus10022206.g Linum usitatissimum Lus10022206.g I 0.766
MDP0000225209 Malus domestica MDP0000225209 I 0.766
orange1.1g041626m.g Citrus sinensis orange1.1g041626m.g I 0.766
Pavir.Aa03593 Panicum virgatum Pavir.Aa03593 I 0.766
Pavir.Ab00024 Panicum virgatum Pavir.Ab00024 I 0.766
SapurV1A.0006s1030 Salix purpurea SapurV1A.0006s1030 I 0.766
SapurV1A.0007s0790 Salix purpurea SapurV1A.0007s0790 I 0.766
SapurV1A.0292s0200 Salix purpurea SapurV1A.0292s0200 I 0.766
SapurV1A.0378s0150 Salix purpurea SapurV1A.0378s0150 I 0.766
Thhalv10015420m.g Eutrema salsugineum Thhalv10015420m.g I 0.766
Thhalv10017870m.g Eutrema salsugineum Thhalv10017870m.g I 0.766
Thhalv10021992m.g Eutrema salsugineum Thhalv10021992m.g I 0.766
LjSGA_038753.2 Lotus japonicus LjSGA_038753.2 I 0.766
PDK_20s1313421g001 Phoenix dactylifera PDK_20s1313421g001 I 0.766
PDK_20s1360411g001 Phoenix dactylifera PDK_20s1360411g001 I 0.766
BGIOSGA015610 Oryza indica BGIOSGA015610 I 0.764
F775_21953 Aegilops tauschii F775_21953 I 0.764
GLYMA12G35930 Glycine max GLYMA12G35930 I 0.764
GLYMA13G34450 Glycine max GLYMA13G34450 I 0.764
GRMZM2G137736 Zea mays GRMZM2G137736 I 0.764
LPERR04G01660 Leersia perrieri LPERR04G01660 I 0.764
OB04G12040 Oryza brachyantha OB04G12040 I 0.764
OBART04G02370 Oryza barthii OBART04G02370 I 0.764
OGLUM04G02100 Oryza glumaepatula OGLUM04G02100 I 0.764
OLONG_022667 Oryza longistaminata OLONG_022667 I 0.764
OMERI04G02610 Oryza meridionalis OMERI04G02610 I 0.764
ONIVA04G01910 Oryza nivara ONIVA04G01910 I 0.764
ORUFI04G03150 Oryza rufipogon ORUFI04G03150 I 0.764
OS04G0168100 Oryza sativa OS04G0168100 I 0.764
Sb06g001730 Sorghum bicolor Sb06g001730 I 0.764
Ca_12901 Cicer arietinum Ca_12901 I 0.764
mg013419m Mimulus guttatus mg013419m I 0.764
Lus10000705.g Linum usitatissimum Lus10000705.g I 0.764
Lus10024875.g Linum usitatissimum Lus10024875.g I 0.764
Pavir.Gb02516 Panicum virgatum Pavir.Gb02516 I 0.764
Pavir.J31403 Panicum virgatum Pavir.J31403 I 0.764