estExt_fgenesh1_kg.C_chr_70108 (Mycosphaerella graminicola)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 estExt_fgenesh1_kg.C_chr_70108 T138494_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
msn-1
M01192_2.00 		Neurospora crassa
VCCCCTDW
WHAGGGGB		 PBM
Lambert et al.(2019)
pTH8923 		0.781 0.826
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_kg.C_chr_70108 C2H2 ZF 447 470
estExt_fgenesh1_kg.C_chr_70108 C2H2 ZF 476 498

Links

Other C2H2 ZF family TFs
Other Mycosphaerella graminicola TFs

147 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29709.m001180 Ricinus communis 29709.m001180 N 0.000
AT2G44730 Arabidopsis thaliana AT2G44730 N 0.000
BGIOSGA033455 Oryza indica BGIOSGA033455 N 0.000
Bo3g037360 Brassica oleracea Bo3g037360 N 0.000
Bo4g023990 Brassica oleracea Bo4g023990 N 0.000
Bostr.25993s0300 Boechera stricta Bostr.25993s0300 N 0.000
Bra000360 Brassica rapa Bra000360 N 0.000
BRADI3G38680 Brachypodium distachyon BRADI3G38680 N 0.000
Cagra.0239s0022 Capsella grandiflora Cagra.0239s0022 N 0.000
Carubv10025047m.g Capsella rubella Carubv10025047m.g N 0.000
cassava12982.valid.m1 Manihot esculenta cassava12982.valid.m1 N 0.000
Ca_06067 Cicer arietinum Ca_06067 N 0.000
Ca_06795 Cicer arietinum Ca_06795 N 0.000
Cla021714 Citrullus lanatus Cla021714 N 0.000
Cucsa.078220 Cucumis sativus Cucsa.078220 N 0.000
Cucsa.256710 Cucumis sativus Cucsa.256710 N 0.000
evm.TU.supercontig_41.83 Carica papaya evm.TU.supercontig_41.83 N 0.000
fgenesh2_kg.4__2662__AT2G44730.1 Arabidopsis lyrata fgenesh2_kg.4__2662__AT2G44730.1 N 0.000
gene05318-v1.0-hybrid Fragaria vesca gene05318-v1.0-hybrid N 0.000
GLYMA08G05630 Glycine max GLYMA08G05630 N 0.000
GLYMA18G48343 Glycine max GLYMA18G48343 N 0.000
MDP0000557282 Malus domestica MDP0000557282 N 0.000
mgf005560m Mimulus guttatus mgf005560m N 0.000
MTR_4g117990 Medicago truncatula MTR_4g117990 N 0.000
OBART10G18780 Oryza barthii OBART10G18780 N 0.000
OGLUM10G18860 Oryza glumaepatula OGLUM10G18860 N 0.000
OMERI08G00160 Oryza meridionalis OMERI08G00160 N 0.000
ONIVA10G21280 Oryza nivara ONIVA10G21280 N 0.000
OPUNC10G17200 Oryza punctata OPUNC10G17200 N 0.000
ORGLA10G0139200 Oryza glaberrima ORGLA10G0139200 N 0.000
ORUFI10G19970 Oryza rufipogon ORUFI10G19970 N 0.000
OS10G0564200 Oryza sativa OS10G0564200 N 0.000
Pavir.Ib02309 Panicum virgatum Pavir.Ib02309 N 0.000
PGSC0003DMG400001696 Solanum tuberosum PGSC0003DMG400001696 N 0.000
PK17306.1 Cannabis sativa PK17306.1 N 0.000
POPTR_0002s14030 Populus trichocarpa POPTR_0002s14030 N 0.000
POPTR_0014s05010 Populus trichocarpa POPTR_0014s05010 N 0.000
SapurV1A.0033s0070 Salix purpurea SapurV1A.0033s0070 N 0.000
Solyc01g088820.2 Solanum lycopersicum Solyc01g088820.2 N 0.000
Thhalv10001488m.g Eutrema salsugineum Thhalv10001488m.g N 0.000
VIT_07s0005g06670 Vitis vinifera VIT_07s0005g06670 N 0.000