Lus10038929.g (Linum usitatissimum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Lus10038929.g T143157_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10038929 C2H2 ZF 140 162
Lus10038929 C2H2 ZF 205 227

Links

Other C2H2 ZF family TFs
Other Linum usitatissimum TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30147.m014242 Ricinus communis 30147.m014242 I 0.780
30174.m008818 Ricinus communis 30174.m008818 I 0.765
AC185108.3_FG011 Zea mays AC185108.3_FG011 I 0.758
Bo1g081350 Brassica oleracea Bo1g081350 I 0.762
Bo7g098740 Brassica oleracea Bo7g098740 N 0.762
Bostr.26675s0176 Boechera stricta Bostr.26675s0176 I 0.769
Bra012914 Brassica rapa Bra012914 I 0.762
Bra012953 Brassica rapa Bra012953 N 0.762
Bra018817 Brassica rapa Bra018817 I 0.769
Bra029985 Brassica rapa Bra029985 I 0.762
cassava14164.m1 Manihot esculenta cassava14164.m1 I 0.765
cassava19892.m1 Manihot esculenta cassava19892.m1 I 0.765
cassava21316.m1 Manihot esculenta cassava21316.m1 I 0.786
cassava32957.m1 Manihot esculenta cassava32957.m1 I 0.769
cassava47027.m1 Manihot esculenta cassava47027.m1 N 0.776
Ca_05641 Cicer arietinum Ca_05641 I 0.770
Ciclev10007101m.g Citrus clementina Ciclev10007101m.g I 0.770
Cla001400 Citrullus lanatus Cla001400 I 0.790
Eucgr.D02497 Eucalyptus grandis Eucgr.D02497 I 0.766
Eucgr.F02262 Eucalyptus grandis Eucgr.F02262 I 0.770
Eucgr.K00165 Eucalyptus grandis Eucgr.K00165 I 0.785
evm.TU.supercontig_111.55 Carica papaya evm.TU.supercontig_111.55 N 0.789
evm.TU.supercontig_249.7 Carica papaya evm.TU.supercontig_249.7 I 0.770
fgenesh1_pm.C_scaffold_1003183 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1003183 I 0.764
GLYMA10G40400 Glycine max GLYMA10G40400 I 0.770
Gorai.005G232300 Gossypium raimondii Gorai.005G232300 I 0.770
Gorai.008G106500 Gossypium raimondii Gorai.008G106500 I 0.766
mgf017082m Mimulus guttatus mgf017082m I 0.765
mgf021094m Mimulus guttatus mgf021094m I 0.766
MLOC_51405 Hordeum vulgare MLOC_51405 I 0.764
OPUNC12G15600 Oryza punctata OPUNC12G15600 I 0.759
OS12G0583700 Oryza sativa OS12G0583700 I 0.759
Pavir.Ba01050 Panicum virgatum Pavir.Ba01050 I 0.758
Pavir.J15191 Panicum virgatum Pavir.J15191 I 0.758
PGSC0003DMG400026020 Solanum tuberosum PGSC0003DMG400026020 I 0.765
POPTR_0001s00800 Populus trichocarpa POPTR_0001s00800 I 0.785
SapurV1A.1544s0070 Salix purpurea SapurV1A.1544s0070 I 0.786
SapurV1A.1944s0060 Salix purpurea SapurV1A.1944s0060 I 0.786
Sb02g038070 Sorghum bicolor Sb02g038070 I 0.758
Si032711m.g Setaria italica Si032711m.g I 0.758
Solyc01g090840.2 Solanum lycopersicum Solyc01g090840.2 I 0.765
Solyc01g107170.2 Solanum lycopersicum Solyc01g107170.2 I 0.770
Thhalv10005323m.g Eutrema salsugineum Thhalv10005323m.g N 0.762
Thhalv10010909m.g Eutrema salsugineum Thhalv10010909m.g I 0.762
Traes_4BS_FE945D2FC Triticum aestivum Traes_4BS_FE945D2FC I 0.764