ENSSTOG00000027979 (Ictidomys tridecemlineatus)
CSD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00313 (CSD) IPR002059 ENSSTOG00000027979 T164805_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YBX1
M04661_2.00 		Homo sapiens
GRTGGWACR
YGTWCCAYC		 SELEX
Yin et al.(2017)
YBX1_eDBD_HT-SELEX 		0.818 0.818
YBX1
M10411_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YB1_Q3 		0.818 0.818
YBX1
M10412_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$YB1_Q4 		0.818 0.818
YBX1
M04662_2.00 		Homo sapiens
GRTGKDRCD
HGYHMCAYC		 SELEX
Yin et al.(2017)
YBX1_eDBD_Methyl-HT-SELEX 		0.818 0.818
NEMVEDRAFT_v1g104083
M01207_2.00 		Nematostella vectensis
NNNDDHRN
NYDHHNNN		 PBM
Lambert et al.(2019)
pTH9768 		0.742 0.742
cey-1
M01903_2.00 		Caenorhabditis elegans
NNNGRTRDD
HHYAYCNNN		 PBM
Weirauch et al.(2014)
pTH8991 		0.712 0.712
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSTOP00000021165 CSD 69 138

Links

Other CSD family TFs
Other Ictidomys tridecemlineatus TFs

367 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29737.m001227 Ricinus communis 29737.m001227 I
29848.m004559 Ricinus communis 29848.m004559 I
29929.m004752 Ricinus communis 29929.m004752 I
AMTR_s00049p00081480 Amborella trichopoda AMTR_s00049p00081480 I
Aquca_011_00344 Aquilegia coerulea Aquca_011_00344 I
Aquca_016_00168 Aquilegia coerulea Aquca_016_00168 I
Aquca_056_00105 Aquilegia coerulea Aquca_056_00105 I
ARR11 Arabidopsis thaliana AT1G67710 D
ARR12 Arabidopsis thaliana AT2G25180 I
BGIOSGA000304 Oryza indica BGIOSGA000304 I
RR23 Oryza indica BGIOSGA005436 I
RR22 Oryza indica BGIOSGA022430 I
Bo4g157430 Brassica oleracea Bo4g157430 I
Bo6g098710 Brassica oleracea Bo6g098710 I
Bo6g105120 Brassica oleracea Bo6g105120 I
Bostr.26833s0442 Boechera stricta Bostr.26833s0442 I
Bostr.26959s0139 Boechera stricta Bostr.26959s0139 I
Bra004076 Brassica rapa Bra004076 I
Bra004245 Brassica rapa Bra004245 I
Bra032035 Brassica rapa Bra032035 I
BRADI2G58020 Brachypodium distachyon BRADI2G58020 I
BRADI3G06120 Brachypodium distachyon BRADI3G06120 I
Cagra.0891s0003 Capsella grandiflora Cagra.0891s0003 I
Cagra.2261s0012 Capsella grandiflora Cagra.2261s0012 I
Cagra.2381s0022 Capsella grandiflora Cagra.2381s0022 I
Carubv10020133m.g Capsella rubella Carubv10020133m.g I
Carubv10022837m.g Capsella rubella Carubv10022837m.g I
Carubv10026052m.g Capsella rubella Carubv10026052m.g I
cassava13981.valid.m1 Manihot esculenta cassava13981.valid.m1 I
cassava18404.valid.m1 Manihot esculenta cassava18404.valid.m1 I
cassava18405.valid.m1 Manihot esculenta cassava18405.valid.m1 I
cassava262.valid.m1 Manihot esculenta cassava262.valid.m1 I
cassava29171.valid.m1 Manihot esculenta cassava29171.valid.m1 I
cassava32312.m1 Manihot esculenta cassava32312.m1 I
cassava8114.valid.m1 Manihot esculenta cassava8114.valid.m1 I
Ca_11309 Cicer arietinum Ca_11309 I
chr5.CM0345.260.nd Lotus japonicus chr5.CM0345.260.nd I
chr6.CM0037.920.nc Lotus japonicus chr6.CM0037.920.nc I
Ciclev10007639m.g Citrus clementina Ciclev10007639m.g I
Ciclev10031052m.g Citrus clementina Ciclev10031052m.g I
Cla021325 Citrullus lanatus Cla021325 I
Cucsa.271670 Cucumis sativus Cucsa.271670 I
Cucsa.350850 Cucumis sativus Cucsa.350850 I
Cucsa.394720 Cucumis sativus Cucsa.394720 I
Eucgr.C00380 Eucalyptus grandis Eucgr.C00380 I
Eucgr.C04050 Eucalyptus grandis Eucgr.C04050 I
Eucgr.H04693 Eucalyptus grandis Eucgr.H04693 I
Eucgr.H04694 Eucalyptus grandis Eucgr.H04694 I
evm.TU.supercontig_46.117 Carica papaya evm.TU.supercontig_46.117 I
evm.TU.supercontig_86.17 Carica papaya evm.TU.supercontig_86.17 I
F775_13501 Aegilops tauschii F775_13501 I
F775_19079 Aegilops tauschii F775_19079 I
F775_27736 Aegilops tauschii F775_27736 I
ARR12 Arabidopsis lyrata fgenesh2_kg.4__435__AT2G25180.1 I
GLYMA04G06650 Glycine max GLYMA04G06650 I
GLYMA05G27670 Glycine max GLYMA05G27670 I
GLYMA06G06730 Glycine max GLYMA06G06730 I
GLYMA08G10650 Glycine max GLYMA08G10650 I
GLYMA09G14650 Glycine max GLYMA09G14650 I
GLYMA11G37480 Glycine max GLYMA11G37480 I
GLYMA14G13320 Glycine max GLYMA14G13320 I
GLYMA15G24770 Glycine max GLYMA15G24770 I
GLYMA18G01434 Glycine max GLYMA18G01434 I
Gorai.004G291100 Gossypium raimondii Gorai.004G291100 I
Gorai.005G173300 Gossypium raimondii Gorai.005G173300 I
Gorai.009G054200 Gossypium raimondii Gorai.009G054200 I
Gorai.009G061000 Gossypium raimondii Gorai.009G061000 I
Gorai.010G243900 Gossypium raimondii Gorai.010G243900 I
GRMZM2G060485 Zea mays GRMZM2G060485 I
GRMZM2G100318 Zea mays GRMZM2G100318 I
GRMZM2G177220 Zea mays GRMZM2G177220 I
GRMZM2G479110 Zea mays GRMZM2G479110 I
GSMUA_Achr3G14630_001 Musa acuminata GSMUA_Achr3G14630_001 I
GSMUA_Achr8G32070_001 Musa acuminata GSMUA_Achr8G32070_001 I
LjSGA_022114.1 Lotus japonicus LjSGA_022114.1 I
LPERR01G35510 Leersia perrieri LPERR01G35510 I
LPERR06G04900 Leersia perrieri LPERR06G04900 I
Lus10006446.g Linum usitatissimum Lus10006446.g I
Lus10011389.g Linum usitatissimum Lus10011389.g I
Lus10019058.g Linum usitatissimum Lus10019058.g I
Lus10036303.g Linum usitatissimum Lus10036303.g I
MDP0000305167 Malus domestica MDP0000305167 I
MDP0000307383 Malus domestica MDP0000307383 I
MDP0000320381 Malus domestica MDP0000320381 I
mgf000016m Mimulus guttatus mgf000016m I
mgf004388m Mimulus guttatus mgf004388m I
mgf013006m Mimulus guttatus mgf013006m I
MLOC_23250 Hordeum vulgare MLOC_23250 I
MLOC_3955 Hordeum vulgare MLOC_3955 I
MLOC_61880 Hordeum vulgare MLOC_61880 I
MTR_1g013180 Medicago truncatula MTR_1g013180 I
MTR_3g086100 Medicago truncatula MTR_3g086100 I
MTR_8g079940 Medicago truncatula MTR_8g079940 I
OB01G49660 Oryza brachyantha OB01G49660 I
OB02G42700 Oryza brachyantha OB02G42700 I
OB06G14930 Oryza brachyantha OB06G14930 I
OBART01G40940 Oryza barthii OBART01G40940 I
OBART06G05360 Oryza barthii OBART06G05360 I
OGLUM01G45120 Oryza glumaepatula OGLUM01G45120 I
OGLUM06G05540 Oryza glumaepatula OGLUM06G05540 I
OLONG_004141 Oryza longistaminata OLONG_004141 I
OMERI01G37950 Oryza meridionalis OMERI01G37950 I
OMERI06G06380 Oryza meridionalis OMERI06G06380 I
ONIVA01G45980 Oryza nivara ONIVA01G45980 I
ONIVA06G06160 Oryza nivara ONIVA06G06160 I
OPUNC01G39740 Oryza punctata OPUNC01G39740 I
OPUNC06G05150 Oryza punctata OPUNC06G05150 I
orange1.1g005465m.g Citrus sinensis orange1.1g005465m.g I
orange1.1g007940m.g Citrus sinensis orange1.1g007940m.g I
orange1.1g027234m.g Citrus sinensis orange1.1g027234m.g I
ORGLA01G0348700 Oryza glaberrima ORGLA01G0348700 I
ORGLA02G0311700 Oryza glaberrima ORGLA02G0311700 I
ORGLA06G0048800 Oryza glaberrima ORGLA06G0048800 I
ORUFI01G44260 Oryza rufipogon ORUFI01G44260 I
ORUFI06G05490 Oryza rufipogon ORUFI06G05490 I
RR26 Oryza sativa OS01G0904700 I
RR23 Oryza sativa OS02G0796500 I
RR22 Oryza sativa OS06G0183100 I
Pavir.Aa03151 Panicum virgatum Pavir.Aa03151 I
Pavir.Ab00568 Panicum virgatum Pavir.Ab00568 I
Pavir.Da02067 Panicum virgatum Pavir.Da02067 I
Pavir.Ea03527 Panicum virgatum Pavir.Ea03527 I
Pavir.J08270 Panicum virgatum Pavir.J08270 I
Pavir.J23046 Panicum virgatum Pavir.J23046 I
Pavir.J35630 Panicum virgatum Pavir.J35630 I
PDK_20s1342911g003 Phoenix dactylifera PDK_20s1342911g003 I
PDK_20s1362511g001 Phoenix dactylifera PDK_20s1362511g001 I
PDK_20s1379531g004 Phoenix dactylifera PDK_20s1379531g004 I
PDK_20s1782651g001 Phoenix dactylifera PDK_20s1782651g001 I
PGSC0003DMG400011980 Solanum tuberosum PGSC0003DMG400011980 I
PK07924.1 Cannabis sativa PK07924.1 D
Pm006838 Prunus mume Pm006838 I
POPTR_0006s20220 Populus trichocarpa POPTR_0006s20220 I
POPTR_0008s18130 Populus trichocarpa POPTR_0008s18130 I
POPTR_0010s06290 Populus trichocarpa POPTR_0010s06290 I
POPTR_0018s11960 Populus trichocarpa POPTR_0018s11960 I
PRUPE_ppa002679mg Prunus persica PRUPE_ppa002679mg I
SapurV1A.0100s0230 Salix purpurea SapurV1A.0100s0230 I
SapurV1A.0152s0010 Salix purpurea SapurV1A.0152s0010 I
SapurV1A.0206s0280 Salix purpurea SapurV1A.0206s0280 I
SapurV1A.0347s0250 Salix purpurea SapurV1A.0347s0250 I
SapurV1A.0629s0180 Salix purpurea SapurV1A.0629s0180 I
SapurV1A.0730s0060 Salix purpurea SapurV1A.0730s0060 I
Sb03g043080 Sorghum bicolor Sb03g043080 I
Sb04g005580 Sorghum bicolor Sb04g005580 I
Sb04g035980 Sorghum bicolor Sb04g035980 I
Sb10g005580 Sorghum bicolor Sb10g005580 I
ARR11 Arabidopsis lyrata scaffold_201596.1 I
Si000815m.g Setaria italica Si000815m.g I
Si006013m.g Setaria italica Si006013m.g I
Si016546m.g Setaria italica Si016546m.g I
Si016630m.g Setaria italica Si016630m.g I
Solyc05g014260.2 Solanum lycopersicum Solyc05g014260.2 I
TCM_010701 Theobroma cacao TCM_010701 I
TCM_036926 Theobroma cacao TCM_036926 I
TCM_037098 Theobroma cacao TCM_037098 I
Thhalv10000098m.g Eutrema salsugineum Thhalv10000098m.g I
Thhalv10018396m.g Eutrema salsugineum Thhalv10018396m.g I
TRAES3BF094200030CFD_g Triticum aestivum TRAES3BF094200030CFD_g I
TRAES3BF107400040CFD_g Triticum aestivum TRAES3BF107400040CFD_g I
Traes_3AL_9D2735F60 Triticum aestivum Traes_3AL_9D2735F60 I
Traes_3B_D9F27151E Triticum aestivum Traes_3B_D9F27151E I
Traes_3DL_D82CA7827 Triticum aestivum Traes_3DL_D82CA7827 I
Traes_6AS_A42E71A00 Triticum aestivum Traes_6AS_A42E71A00 I
Traes_6BS_B50BEBC7E Triticum aestivum Traes_6BS_B50BEBC7E I
Traes_6DS_EF4A57213 Triticum aestivum Traes_6DS_EF4A57213 I
Traes_7AS_DECB8080D Triticum aestivum Traes_7AS_DECB8080D I
Traes_7DS_22DE624A5 Triticum aestivum Traes_7DS_22DE624A5 I
TRIUR3_26858 Triticum urartu TRIUR3_26858 I
TRIUR3_28229 Triticum urartu TRIUR3_28229 I
TRIUR3_31924 Triticum urartu TRIUR3_31924 I
ARR11 Vitis vinifera VIT_01s0010g02230 I
VIT_04s0008g05900 Vitis vinifera VIT_04s0008g05900 I
VIT_11s0206g00060 Vitis vinifera VIT_11s0206g00060 I
VIT_17s0000g10100 Vitis vinifera VIT_17s0000g10100 I