GCM2 (Oryctolagus cuniculus)
GCM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03615 (GCM) IPR003902 ENSOCUG00000017698 T198032_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GCM2
M03067_2.00 		Homo sapiens
NATGCGGGYD
HRCCCGCATN		 SELEX
Jolma et al.(2013)
GCM2_1 		0.942 0.942
GCM2
M04881_2.00 		Homo sapiens
RTGCGGGYN
NRCCCGCAY		 SELEX
Yin et al.(2017)
GCM2_FL_HT-SELEX 		0.942 0.942
GCM2
M10602_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GCMB_Q2 		0.942 0.942
GCM2
M04882_2.00 		Homo sapiens
ATRHKGGYN
NRCCMDYAT		 SELEX
Yin et al.(2017)
GCM2_FL_Methyl-HT-SELEX 		0.942 0.942
GCM2
M02023_2.00 		Taeniopygia guttata
NRTRHKGGYN
NRCCMDYAYN		 PBM
Weirauch et al.(2014)
pTH9341 		0.862 0.862
ENSTRUG00000003586
M02025_2.00 		Takifugu rubripes
NRTRNGGGYN
NRCCCNYAYN		 PBM
Weirauch et al.(2014)
pTH9357 		0.833 0.833
gcm2
M02024_2.00 		Tetraodon nigroviridis
ATRCGGGY
RCCCGYAT		 PBM
Weirauch et al.(2014)
pTH9386 		0.826 0.826
Gcm1
M00168_2.00 		Mus musculus
NVTRVGGGY
RCCCBYABN		 PBM
Badis et al.(2009)
Gcm1_3732 		0.710 0.710
Gcm1
M02022_2.00 		Rattus norvegicus
NNRTRVGGGY
RCCCBYAYNN		 PBM
Weirauch et al.(2014)
pTH9283 		0.710 0.710
GCM1
M02021_2.00 		Meleagris gallopavo
VTVNKGGYNN
NNRCCMNBAB		 PBM
Weirauch et al.(2014)
pTH8653 		0.703 0.703
XP_004449939.1
M02027_2.00 		Dasypus novemcinctus
RTRSGGGY
RCCCSYAY		 PBM
Weirauch et al.(2014)
pTH9259 		0.703 0.703
GCM1
M02020_2.00 		Homo sapiens
NVTVNGGGN
NCCCNBABN		 PBM
Weirauch et al.(2014)
pTH7965 		0.696 0.696
GCM1
M03068_2.00 		Homo sapiens
BATGCGGGTR
YACCCGCATV		 SELEX
Jolma et al.(2013)
GCM1_1 		0.696 0.696
GCM1
M03069_2.00 		Homo sapiens
RTRYKGGYRCCMGYAN
NTRCKGGYRCCMRYAY		 SELEX
Jolma et al.(2013)
GCM1_2 		0.696 0.696
GCM1
M03070_2.00 		Homo sapiens
BATGCGGGTRS
SYACCCGCATV		 SELEX
Jolma et al.(2013)
GCM1_3 		0.696 0.696
GCM1
M04883_2.00 		Homo sapiens
RTGSGGGBV
BVCCCSCAY		 SELEX
Yin et al.(2017)
GCM1_eDBD_HT-SELEX 		0.696 0.696
GCM1
M05868_2.00 		Homo sapiens
ATGCGGGYV
BRCCCGCAT		 SMiLE-seq
Isakova et al.(2017)
GCM1 		0.696 0.696
GCM1
M10603_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GCMA_Q4 		0.696 0.696
GCM1
M10604_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GCM_Q2 		0.696 0.696
GCM1
M04884_2.00 		Homo sapiens
ATRNKGGYV
BRCCMNYAT		 SELEX
Yin et al.(2017)
GCM1_eDBD_Methyl-HT-SELEX 		0.696 0.696
gcm2
M02026_2.00 		Drosophila melanogaster
ATGCGGGY
RCCCGCAT		 PBM
Weirauch et al.(2014)
pTH8361 		0.667 0.667
gcm2
M03767_2.00 		Drosophila melanogaster
NATGCGGGYNNNRCCCGCATN
NATGCGGGYNNNRCCCGCATN		 SELEX
Nitta et al.(2015)
gcm2_1 		0.667 0.667
gcm2
M03768_2.00 		Drosophila melanogaster
BATGCKGGTACCMGCATV
BATGCKGGTACCMGCATV		 SELEX
Nitta et al.(2015)
gcm2_2 		0.667 0.667
gcm
M03764_2.00 		Drosophila melanogaster
HATGCGGGYVVBRCCCGCATV
BATGCGGGYVBBRCCCGCATD		 SELEX
Nitta et al.(2015)
gcm_1 		0.652 0.652
gcm
M03765_2.00 		Drosophila melanogaster
VATGCKGGYRCCMGCATV
BATGCKGGYRCCMGCATB		 SELEX
Nitta et al.(2015)
gcm_2 		0.652 0.652
gcm
M03766_2.00 		Drosophila melanogaster
YATGCGGGTACCAGCATV
BATGCTGGTACCCGCATR		 SELEX
Nitta et al.(2015)
gcm_3 		0.652 0.652
gcm
M10605_2.00 		Drosophila melanogaster
NDNATGCGGGYNB
VNRCCCGCATNHN		 Transfac
Matys et al.(2006)
I$GCM_01 		0.652 0.652
For this family, TFs with SR scores > 0.607 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOCUP00000015197 GCM 35 172

Links

Other GCM family TFs
Other Oryctolagus cuniculus TFs

234 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R005718 Calypte anna Aan_R005718 I
AARA010781 Anopheles arabiensis AARA010781 I
ACAC_0001290301 Angiostrongylus cantonensis ACAC_0001290301 I
ACEP15304 Atta cephalotes ACEP15304 I
ACEP15310 Atta cephalotes ACEP15310 I
ACHR005005 Anopheles christyi ACHR005005 I
ACOC_0000178201 Angiostrongylus costaricensis ACOC_0000178201 I
ACUA026425 Anopheles culicifacies ACUA026425 I
ADIR011362 Anopheles dirus ADIR011362 I
AEPI004837 Anopheles epiroticus AEPI004837 I
AFAF004706 Anopheles farauti AFAF004706 I
Afo_R004464 Aptenodytes forsteri Afo_R004464 I
Alligator_sinensis_CCG004503.1 Alligator sinensis Alligator_sinensis_CCG004503.1 I
Alligator_sinensis_CCG006492.1 Alligator sinensis Alligator_sinensis_CCG006492.1 I
Alligator_sinensis_CCG007145.1 Alligator sinensis Alligator_sinensis_CCG007145.1 I
Alligator_sinensis_CCG007145.2 Alligator sinensis Alligator_sinensis_CCG007145.2 I
ALUE_0000098101 Ascaris lumbricoides ALUE_0000098101 I
ALUE_0001653201 Ascaris lumbricoides ALUE_0001653201 I
AMAM016481 Anopheles maculatus AMAM016481 I
AMIN006553 Anopheles minimus AMIN006553 I
ANCCAN_01421 Ancylostoma caninum ANCCAN_01421 I
AQUA004184 Anopheles quadriannulatus AQUA004184 I
BGLB002028 Biomphalaria glabrata BGLB002028 I
Cflo_06473--XP_394848.3_APIME Camponotus floridanus Cflo_06473--XP_394848.3_APIME I
CGI_10005222 Crassostrea gigas CGI_10005222 I
CLEC006621 Cimex lectularius CLEC006621 I
CLEC009745 Cimex lectularius CLEC009745 I
Cmyd_10010530 Chelonia mydas Cmyd_10010530 I
CPIJ006494 Culex quinquefasciatus CPIJ006494 I
CPIJ009206 Culex quinquefasciatus CPIJ009206 I
CPIJ019791 Culex quinquefasciatus CPIJ019791 I
CpipJ_CPIJ006494 Culex pipiens CpipJ_CPIJ006494 I
CpipJ_CPIJ009206 Culex pipiens CpipJ_CPIJ009206 I
CpipJ_CPIJ019791 Culex pipiens CpipJ_CPIJ019791 I
DAPPUDRAFT_65647 Daphnia pulex DAPPUDRAFT_65647 I
DAPPUDRAFT_7942 Daphnia pulex DAPPUDRAFT_7942 I
ENSACAG00000001481 Anolis carolinensis ENSACAG00000001481 I
ENSACAG00000010563 Anolis carolinensis ENSACAG00000010563 I
ENSACAG00000011033 Anolis carolinensis ENSACAG00000011033 I
ENSAMEG00000002906 Ailuropoda melanoleuca ENSAMEG00000002906 I
ENSAMEG00000012642 Ailuropoda melanoleuca ENSAMEG00000012642 I
ENSAMXG00000002161 Astyanax mexicanus ENSAMXG00000002161 I
ENSAMXG00000008583 Astyanax mexicanus ENSAMXG00000008583 I
ENSAPLG00000012856 Anas platyrhynchos ENSAPLG00000012856 I
PAX1 Bos taurus ENSBTAG00000006742 I
PAX9 Bos taurus ENSBTAG00000009186 I
ENSBTAP00000008861-D1 Bos grunniens ENSBTAP00000008861-D1 I
PAX1 Canis familiaris ENSCAFG00000005170 I
PAX9 Canis familiaris ENSCAFG00000013690 I
PAX3 Choloepus hoffmanni ENSCHOG00000009119 I
PAX1 Callithrix jacchus ENSCJAG00000005773 I
PAX3 Callithrix jacchus ENSCJAG00000012088 I
PAX9 Callithrix jacchus ENSCJAG00000016460 I
PAX1 Cavia porcellus ENSCPOG00000002886 I
PAX9 Cavia porcellus ENSCPOG00000010951 I
ENSCSAG00000011068 Chlorocebus sabaeus ENSCSAG00000011068 I
ENSCSAG00000015463 Chlorocebus sabaeus ENSCSAG00000015463 I
pax1a Danio rerio ENSDARG00000008203 I
pax2a Danio rerio ENSDARG00000028148 I
pax6b Danio rerio ENSDARG00000045936 I
pax9 Danio rerio ENSDARG00000053829 D
pax1b Danio rerio ENSDARG00000073814 I
pax6a Danio rerio ENSDARG00000103379 I
PAX9 Dasypus novemcinctus ENSDNOG00000000352 I
PAX1 Dasypus novemcinctus ENSDNOG00000033546 I
Pax7 Dipodomys ordii ENSDORG00000011854 I
Pax5 Dipodomys ordii ENSDORG00000015818 I
Pax1 Dipodomys ordii ENSDORG00000016051 I
PAX9 Equus caballus ENSECAG00000023712 I
PAX1 Erinaceus europaeus ENSEEUG00000007846 I
PAX9 Echinops telfairi ENSETEG00000002086 I
ENSETEG00000015207 Echinops telfairi ENSETEG00000015207 I
ENSFALG00000006155 Ficedula albicollis ENSFALG00000006155 I
PAX9 Felis catus ENSFCAG00000001024 I
PAX1 Felis catus ENSFCAG00000004293 I
PAX7 Homo sapiens ENSG00000009709 D
PAX1 Homo sapiens ENSG00000125813 D
PAX3 Homo sapiens ENSG00000135903 D
PAX9 Homo sapiens ENSG00000198807 D
pax1a Gasterosteus aculeatus ENSGACG00000006987 I
pax9 Gasterosteus aculeatus ENSGACG00000011298 I
PAX9 Gallus gallus ENSGALG00000010114 I
ENSGALG00000028576 Gallus gallus ENSGALG00000028576 I
PAX9 Gorilla gorilla ENSGGOG00000001528 I
PAX1 Gorilla gorilla ENSGGOG00000016075 I
ENSGMOG00000003366 Gadus morhua ENSGMOG00000003366 I
ENSGMOG00000009128 Gadus morhua ENSGMOG00000009128 I
ENSGMOG00000018913 Gadus morhua ENSGMOG00000018913 I
ENSLACG00000009610 Latimeria chalumnae ENSLACG00000009610 I
ENSLACG00000015921 Latimeria chalumnae ENSLACG00000015921 I
PAX1 Loxodonta africana ENSLAFG00000008908 I
PAX9 Loxodonta africana ENSLAFG00000017541 I
ENSLOCG00000013992 Lepisosteus oculatus ENSLOCG00000013992 I
ENSLOCG00000016871 Lepisosteus oculatus ENSLOCG00000016871 I
ENSMEUG00000002095 Macropus eugenii ENSMEUG00000002095 I
ENSMEUG00000010140 Macropus eugenii ENSMEUG00000010140 I
ENSMEUG00000011758 Macropus eugenii ENSMEUG00000011758 I
PAX9 Meleagris gallopavo ENSMGAG00000012530 I
PAX9 Microcebus murinus ENSMICG00000010808 I
PAX1 Microcebus murinus ENSMICG00000016968 I
PAX9 Myotis lucifugus ENSMLUG00000011407 I
PAX1 Myotis lucifugus ENSMLUG00000014710 I
PAX9 Macaca mulatta ENSMMUG00000009648 I
PAX1 Macaca mulatta ENSMMUG00000019409 I
PAX3 Macaca mulatta ENSMMUG00000020409 I
PAX1 Monodelphis domestica ENSMODG00000006198 I
PAX9 Monodelphis domestica ENSMODG00000012681 I
ENSMODG00000025571 Monodelphis domestica ENSMODG00000025571 I
ENSMPUG00000001187 Mustela putorius furo ENSMPUG00000001187 I
ENSMPUG00000016259 Mustela putorius furo ENSMPUG00000016259 I
Pax9 Mus musculus ENSMUSG00000001497 I
Pax1 Mus musculus ENSMUSG00000037034 I
ENSNLEG00000003346 Nomascus leucogenys ENSNLEG00000003346 I
ENSNLEG00000010049 Nomascus leucogenys ENSNLEG00000010049 I
PAX1 Ornithorhynchus anatinus ENSOANG00000002008 I
PAX9 Ornithorhynchus anatinus ENSOANG00000014065 I
ENSOARG00000004951 Ovis aries ENSOARG00000004951 I
ENSOARG00000008050 Ovis aries ENSOARG00000008050 I
PAX1 Oryctolagus cuniculus ENSOCUG00000003276 I
ENSOGAG00000013131 Otolemur garnettii ENSOGAG00000013131 I
PAX1 Otolemur garnettii ENSOGAG00000033162 I
ENSONIG00000000990 Oreochromis niloticus ENSONIG00000000990 I
ENSONIG00000008137 Oreochromis niloticus ENSONIG00000008137 I
ENSONIG00000018496 Oreochromis niloticus ENSONIG00000018496 I
PAX1 Ochotona princeps ENSOPRG00000017249 I
pax1 Oryzias latipes ENSORLG00000017412 I
ENSP00000355245 Macaca fascicularis ENSP00000355245 I
ENSP00000381499 Macaca fascicularis ENSP00000381499 I
ENSP00000384817-D1 Bos grunniens ENSP00000384817-D1 I
ENSPANG00000000932 Papio anubis ENSPANG00000000932 I
ENSPANG00000008282 Papio anubis ENSPANG00000008282 I
PAX1 Procavia capensis ENSPCAG00000003556 I
PAX7 Procavia capensis ENSPCAG00000005303 I
ENSPFOG00000003208 Poecilia formosa ENSPFOG00000003208 I
ENSPFOG00000013202 Poecilia formosa ENSPFOG00000013202 I
ENSPFOG00000017550 Poecilia formosa ENSPFOG00000017550 I
ENSPMAG00000010308 Petromyzon marinus ENSPMAG00000010308 I
ENSPPYG00000005755 Pongo abelii ENSPPYG00000005755 I
ENSPPYG00000010758 Pongo abelii ENSPPYG00000010758 I
ENSPSIG00000010961 Pelodiscus sinensis ENSPSIG00000010961 I
PAX9 Pan troglodytes ENSPTRG00000006281 I
PAX1 Pan troglodytes ENSPTRG00000013311 I
PAX1 Pteropus vampyrus ENSPVAG00000002604 I
PAX9 Pteropus vampyrus ENSPVAG00000003728 I
Pax9 Rattus norvegicus ENSRNOG00000008826 I
Pax5 Rattus norvegicus ENSRNOG00000024729 I
PAX9 Sorex araneus ENSSARG00000000337 I
PAX3 Sorex araneus ENSSARG00000003775 I
ENSSHAG00000005531 Sarcophilus harrisii ENSSHAG00000005531 I
ENSSHAG00000017556 Sarcophilus harrisii ENSSHAG00000017556 I
ENSSSCG00000001943 Sus scrofa ENSSSCG00000001943 I
PAX1 Sus scrofa ENSSSCG00000007112 I
ENSSSCG00000016229 Sus scrofa ENSSSCG00000016229 I
ENSSTOG00000003000 Ictidomys tridecemlineatus ENSSTOG00000003000 I
ENSSTOG00000015730 Ictidomys tridecemlineatus ENSSTOG00000015730 I
PAX9 Tupaia belangeri ENSTBEG00000002460 I
PAX5 Tupaia belangeri ENSTBEG00000007983 I
ENSTGUG00000007526 Taeniopygia guttata ENSTGUG00000007526 I
PAX9 Taeniopygia guttata ENSTGUG00000012015 I
ENSTNIG00000002104 Tetraodon nigroviridis ENSTNIG00000002104 I
ENSTNIG00000005618 Tetraodon nigroviridis ENSTNIG00000005618 I
ENSTNIG00000013141 Tetraodon nigroviridis ENSTNIG00000013141 I
pax1a Tetraodon nigroviridis ENSTNIG00000016891 I
pax9 Tetraodon nigroviridis ENSTNIG00000019284 I
ENSTRUG00000007849 Takifugu rubripes ENSTRUG00000007849 I
pax1a Takifugu rubripes ENSTRUG00000008079 I
pax2a Takifugu rubripes ENSTRUG00000008891 I
pax9 Takifugu rubripes ENSTRUG00000011965 I
pax2b Takifugu rubripes ENSTRUG00000011987 I
ENSTSYG00000008085 Tarsius syrichta ENSTSYG00000008085 I
PAX1 Tursiops truncatus ENSTTRG00000002444 I
PAX5 Tursiops truncatus ENSTTRG00000006049 I
PAX8 Vicugna pacos ENSVPAG00000003973 I
ENSXMAG00000015762 Xiphophorus maculatus ENSXMAG00000015762 I
ENSXMAG00000019114 Xiphophorus maculatus ENSXMAG00000019114 I
GL14130 Drosophila persimilis FBgn0151735 I
HHAL001219-PA Halyomorpha halys HHAL001219-PA I
HPBE_0000479901 Heligmosomoides bakeri HPBE_0000479901 I
ISCW003096 Ixodes scapularis ISCW003096 I
KGM_02686 Danaus plexippus KGM_02686 I
LCUP011796 Lucilia cuprina LCUP011796 I
LotgiG161614 Lottia gigantea LotgiG161614 I
NEMVEDRAFT_v1g119149 Nematostella vectensis NEMVEDRAFT_v1g119149 I
OESDEN_18680 Oesophagostomum dentatum OESDEN_18680 I
OFLC_0000380401 Onchocerca flexuosa OFLC_0000380401 I
Ogr06456 Ophisaurus gracilis Ogr06456 I
Ogr15337 Ophisaurus gracilis Ogr15337 I
Ogr18451 Ophisaurus gracilis Ogr18451 I
Ogr19508 Ophisaurus gracilis Ogr19508 I
PEQ_0000701201 Parascaris equorum PEQ_0000701201 I
Pvit_17942 Pogona vitticeps Pvit_17942 I
RPRC001180 Rhodnius prolixus RPRC001180 I
RPRC008887 Rhodnius prolixus RPRC008887 I
Sakowv30044183m.g Saccoglossus kowalevskii Sakowv30044183m.g I
SBAD_0001213701 Soboliphyme baturini SBAD_0001213701 I
SINV15897 Solenopsis invicta SINV15897 I
Sjc_0077510 Schistosoma japonicum Sjc_0077510 I
SMAR008441 Strigamia maritima SMAR008441 I
SMAR015380 Strigamia maritima SMAR015380 I
SMTD_0001918101 Schistosoma mattheei SMTD_0001918101 I
SNAPOd2T00016386001 Oikopleura dioica SNAPOd2T00016386001 I
SROB_0000822501 Schistosoma rodhaini SROB_0000822501 I
pax9 Xenopus tropicalis XB-GENE-482238 I
pax1 Xenopus tropicalis XB-GENE-487951 I
pax9.L Xenopus laevis XB-GENE-864845 I